Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:35 (3145735): wrapper (7.7.26015): starting
12:43:35 (3145735): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 12:43:35] Arguments: --nthreads 3
[2025-10-13 12:43:35] Threads: 3
[2025-10-13 12:43:35] Checking for CVMFS
[2025-10-13 12:43:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:43:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:43:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:43:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:43:35] 2.9.2.0 1460546 5693 84876 151658 1 57 4349696 36864000 0 130560 0 4457756 99.991 193697 793 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:43:35] CVMFS is ok
[2025-10-13 12:43:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:43:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:43:35] Further information can be found at the LHC@home message board.
[2025-10-13 12:43:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:43:35] Checking for apptainer binary...
[2025-10-13 12:43:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:43:35] Running /usr/bin/apptainer --version
[2025-10-13 12:43:35] apptainer version 1.4.1-1.1
[2025-10-13 12:43:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:43:36] thA371a
[2025-10-13 12:43:36] apptainer works
[2025-10-13 12:43:36] Set ATHENA_PROC_NUMBER=3
[2025-10-13 12:43:36] Set ATHENA_CORE_NUMBER=3
[2025-10-13 12:43:36] Starting ATLAS job with PandaID=6840390942
[2025-10-13 12:43:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:10:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:10:53] 2025-10-13 12:10:02,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:10:53] 2025-10-13 12:10:02,682 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:02,834 | INFO     | [data] control thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:02,868 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:02,935 | INFO     | all job control threads have been joined
[2025-10-13 14:10:53] 2025-10-13 12:10:03,203 | INFO     | [payload] control thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:03,208 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:03,441 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:03,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:10:53] 2025-10-13 12:10:03,773 | INFO     | [job] validate thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:03,789 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:03,892 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:03,941 | INFO     | [job] control thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:03,974 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:04,556 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:07,615 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:11,932 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:10:53] 2025-10-13 12:10:12,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:10:53] 2025-10-13 12:10:31,399 | INFO     | PID=3149457 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:10:53] 2025-10-13 12:10:31,400 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:10:53] 2025-10-13 12:10:31,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:10:53] 2025-10-13 12:10:31,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:10:53] 2025-10-13 12:10:47,061 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:10:53] 2025-10-13 12:10:48,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899900815168)>', '<ExcThread(monitor, started 139899416073984)>']
[2025-10-13 14:10:53] 2025-10-13 12:10:48,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:10:53] 2025-10-13 12:10:48,487 | INFO     | [monitor] control thread has ended
[2025-10-13 14:10:53] 2025-10-13 12:10:53,089 | INFO     | all workflow threads have been joined
[2025-10-13 14:10:53] 2025-10-13 12:10:53,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:10:53] 2025-10-13 12:10:53,089 | INFO     | traces error code: 0
[2025-10-13 14:10:53] 2025-10-13 12:10:53,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:10:53] 2025-10-13 12:10:53,139 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:10:53] 2025-10-13 12:10:53,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:10:53] 2025-10-13 12:10:53,144 [wrapper] pilotpid: 3149457
[2025-10-13 14:10:53] 2025-10-13 12:10:53,146 [wrapper] Pilot exit status: 0
[2025-10-13 14:10:53] 2025-10-13 12:10:53,153 [wrapper] pandaids: 6840390942
[2025-10-13 14:10:53] 2025-10-13 12:10:53,170 [wrapper] cleanup supervisor_pilot 3168585 3149458
[2025-10-13 14:10:53] 2025-10-13 12:10:53,172 [wrapper] Test setup, not cleaning
[2025-10-13 14:10:53] 2025-10-13 12:10:53,174 [wrapper] apfmon messages muted
[2025-10-13 14:10:53] 2025-10-13 12:10:53,176 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:10:53] 2025-10-13 12:10:53,179 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:10:53]  *** Error codes and diagnostics ***
[2025-10-13 14:10:53]     "exeErrorCode": 0,
[2025-10-13 14:10:53]     "exeErrorDiag": "",
[2025-10-13 14:10:53]     "pilotErrorCode": 0,
[2025-10-13 14:10:53]     "pilotErrorDiag": "",
[2025-10-13 14:10:53]  *** Listing of results directory ***
[2025-10-13 14:10:53] total 420512
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:01 pilot3.tar.gz
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:37 queuedata.json
[2025-10-13 14:10:53] -rwx------ 1 boinc boinc     36292 Oct 12 18:38 runpilot2-wrapper.sh
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:10:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:43 run_atlas
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:43 job.xml
[2025-10-13 14:10:53] -rw-r--r-- 2 boinc boinc 222089107 Oct 13 12:43 EVNT.46676267._004751.pool.root.1
[2025-10-13 14:10:53] -rw-r--r-- 2 boinc boinc    569683 Oct 13 12:43 input.tar.gz
[2025-10-13 14:10:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:43 start_atlas.sh
[2025-10-13 14:10:53] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:43 shared
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:43 boinc_setup_complete
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc      6439 Oct 13 12:43 init_data.xml
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:43 boinc_lockfile
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc      2550 Oct 13 12:43 pandaJob.out
[2025-10-13 14:10:53] -rw------- 1 boinc boinc    972497 Oct 13 12:43 agis_schedconf.cvmfs.json
[2025-10-13 14:10:53] -rw------- 1 boinc boinc   1560580 Oct 13 12:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:10:53] drwx------ 5 boinc boinc      4096 Oct 13 12:43 pilot3
[2025-10-13 14:10:53] -rw------- 1 boinc boinc 202628731 Oct 13 14:09 HITS.46676269._083714.pool.root.1
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc       529 Oct 13 14:09 boinc_task_state.xml
[2025-10-13 14:10:53] -rw------- 1 boinc boinc      1018 Oct 13 14:09 memory_monitor_summary.json
[2025-10-13 14:10:53] -rw------- 1 boinc boinc    244857 Oct 13 14:09 log.46676269._083714.job.log.tgz.1
[2025-10-13 14:10:53] -rw------- 1 boinc boinc      7766 Oct 13 14:09 heartbeat.json
[2025-10-13 14:10:53] -rw------- 1 boinc boinc        95 Oct 13 14:10 pilot_heartbeat.json
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:10 boinc_mmap_file
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc        27 Oct 13 14:10 wrapper_checkpoint.txt
[2025-10-13 14:10:53] -rw------- 1 boinc boinc      5010 Oct 13 14:10 pilotlog.txt
[2025-10-13 14:10:53] -rw------- 1 boinc boinc    757713 Oct 13 14:10 log.46676269._083714.job.log.1
[2025-10-13 14:10:53] -rw------- 1 boinc boinc       357 Oct 13 14:10 output.list
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:10 runtime_log
[2025-10-13 14:10:53] -rw------- 1 boinc boinc   1024000 Oct 13 14:10 result.tar.gz
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc      8782 Oct 13 14:10 runtime_log.err
[2025-10-13 14:10:53] -rw------- 1 boinc boinc       659 Oct 13 14:10 WtSKDmRGES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtgkNDmQktCHn.diag
[2025-10-13 14:10:53] -rw-r--r-- 1 boinc boinc      6561 Oct 13 14:10 stderr.txt
[2025-10-13 14:10:53] HITS file was successfully produced:
[2025-10-13 14:10:53] -rw------- 1 boinc boinc 202628731 Oct 13 14:09 shared/HITS.pool.root.1
[2025-10-13 14:10:53]  *** Contents of shared directory: ***
[2025-10-13 14:10:53] total 416348
[2025-10-13 14:10:53] -rw-r--r-- 2 boinc boinc 222089107 Oct 13 12:43 ATLAS.root_0
[2025-10-13 14:10:53] -rw-r--r-- 2 boinc boinc    569683 Oct 13 12:43 input.tar.gz
[2025-10-13 14:10:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:43 start_atlas.sh
[2025-10-13 14:10:53] -rw------- 1 boinc boinc 202628731 Oct 13 14:09 HITS.pool.root.1
[2025-10-13 14:10:53] -rw------- 1 boinc boinc   1024000 Oct 13 14:10 result.tar.gz
14:10:55 (3145735): run_atlas exited; CPU time 14865.500527
14:10:55 (3145735): called boinc_finish(0)

</stderr_txt>
]]>

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