Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:04:28 (9127): wrapper (7.7.26015): starting
16:04:28 (9127): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:04:28] Arguments: --nthreads 8
[2025-10-12 16:04:28] Threads: 8
[2025-10-12 16:04:28] Checking for CVMFS
[2025-10-12 16:04:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:04:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:04:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:04:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:04:28] 2.11.2.0 2908 105517 82500 151635 2 56 14364026 20275200 1 130560 2 51547496 99.988 3356019 19750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:04:28] CVMFS is ok
[2025-10-12 16:04:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:04:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:04:28] Further information can be found at the LHC@home message board.
[2025-10-12 16:04:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:04:28] Checking for apptainer binary...
[2025-10-12 16:04:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:04:28] Running /usr/bin/apptainer --version
[2025-10-12 16:04:28] apptainer version 1.3.2-1.el7
[2025-10-12 16:04:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:04:30] c-115-5.aglt2.org
[2025-10-12 16:04:30] apptainer works
[2025-10-12 16:04:30] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:04:30] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:04:30] Starting ATLAS job with PandaID=6840390927
[2025-10-12 16:04:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:56:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:56:04] 2025-10-12 21:55:02,905 | INFO     | -- intersect: -58648575927.53641
[2025-10-12 17:56:04] 2025-10-12 21:55:02,906 | INFO     | intersect: -58648575927.53641
[2025-10-12 17:56:04] 2025-10-12 21:55:02,906 | INFO     | chi2: 1.3711604810688
[2025-10-12 17:56:04] 2025-10-12 21:55:02,906 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | sum of deviations: 12311390819.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | mean x: 1760302629.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | mean y: 2491717.359223301
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | -- intersect: -63962934175.90834
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | intersect: -63962934175.90834
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | chi2: 1.373961002480374
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | current chi2=1.373961002480374 (change=-0.2042446125190878 %)
[2025-10-12 17:56:04] 2025-10-12 21:55:02,907 | INFO     | right removable region: 102
[2025-10-12 17:56:04] 2025-10-12 21:55:02,908 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,908 | INFO     | sum of deviations: -1831862940.0000007
[2025-10-12 17:56:04] 2025-10-12 21:55:02,908 | INFO     | mean x: 1760302934.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,908 | INFO     | mean y: 2536499.7378640776
[2025-10-12 17:56:04] 2025-10-12 21:55:02,909 | INFO     | -- intersect: 9520219364.367258
[2025-10-12 17:56:04] 2025-10-12 21:55:02,909 | INFO     | intersect: 9520219364.367258
[2025-10-12 17:56:04] 2025-10-12 21:55:02,909 | INFO     | chi2: 0.03148583834749073
[2025-10-12 17:56:04] 2025-10-12 21:55:02,909 | INFO     | current chi2=0.03148583834749073 (change=97.70370873561438 %)
[2025-10-12 17:56:04] 2025-10-12 21:55:02,909 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 17:56:04] 2025-10-12 21:55:02,910 | INFO     | sum of deviations: 1208992428.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,910 | INFO     | mean x: 1760303086.5
[2025-10-12 17:56:04] 2025-10-12 21:55:02,910 | INFO     | mean y: 2526567.8163265307
[2025-10-12 17:56:04] 2025-10-12 21:55:02,910 | INFO     | -- intersect: -7290362419.897533
[2025-10-12 17:56:04] 2025-10-12 21:55:02,910 | INFO     | intersect: -7290362419.897533
[2025-10-12 17:56:04] 2025-10-12 21:55:02,910 | INFO     | chi2: 0.00022053797149284028
[2025-10-12 17:56:04] 2025-10-12 21:55:02,910 | INFO     | current chi2=0.00022053797149284028 (change=99.2995645564241 %)
[2025-10-12 17:56:04] 2025-10-12 21:55:02,911 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,911 | INFO     | sum of deviations: 895900899.9999998
[2025-10-12 17:56:04] 2025-10-12 21:55:02,911 | INFO     | mean x: 1760303239.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,911 | INFO     | mean y: 2527681.365591398
[2025-10-12 17:56:04] 2025-10-12 21:55:02,911 | INFO     | -- intersect: -6321159926.194904
[2025-10-12 17:56:04] 2025-10-12 21:55:02,912 | INFO     | intersect: -6321159926.194904
[2025-10-12 17:56:04] 2025-10-12 21:55:02,912 | INFO     | chi2: 5.64477956201263e-05
[2025-10-12 17:56:04] 2025-10-12 21:55:02,912 | INFO     | current chi2=5.64477956201263e-05 (change=74.40450039599695 %)
[2025-10-12 17:56:04] 2025-10-12 21:55:02,912 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,912 | INFO     | sum of deviations: 724473576.0
[2025-10-12 17:56:04] 2025-10-12 21:55:02,913 | INFO     | mean x: 1760303391.5
[2025-10-12 17:56:04] 2025-10-12 21:55:02,913 | INFO     | mean y: 2528366.909090909
[2025-10-12 17:56:04] 2025-10-12 21:55:02,913 | INFO     | -- intersect: -6033339448.608284
[2025-10-12 17:56:04] 2025-10-12 21:55:02,913 | INFO     | intersect: -6033339448.608284
[2025-10-12 17:56:04] 2025-10-12 21:55:02,913 | INFO     | chi2: 5.0452060452411534e-05
[2025-10-12 17:56:04] 2025-10-12 21:55:02,913 | INFO     | current chi2=5.0452060452411534e-05 (change=10.621734829228657 %)
[2025-10-12 17:56:04] 2025-10-12 21:55:02,913 | INFO     | left removable region: 40
[2025-10-12 17:56:04] 2025-10-12 21:55:02,914 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 17:56:04] 2025-10-12 21:55:02,914 | INFO     | sum of deviations: 252202791.99999997
[2025-10-12 17:56:04] 2025-10-12 21:55:02,914 | INFO     | mean x: 1760303818.5
[2025-10-12 17:56:04] 2025-10-12 21:55:02,914 | INFO     | mean y: 2529860.935483871
[2025-10-12 17:56:04] 2025-10-12 21:55:02,914 | INFO     | -- intersect: -6006398456.883159
[2025-10-12 17:56:04] 2025-10-12 21:55:02,914 | INFO     | intersect: -6006398456.883159
[2025-10-12 17:56:04] 2025-10-12 21:55:02,914 | INFO     | chi2: 3.6631528639322254e-05
[2025-10-12 17:56:04] 2025-10-12 21:55:02,915 | INFO     | -- intersect: -6006398456.883159
[2025-10-12 17:56:04] 2025-10-12 21:55:02,915 | INFO     | current memory leak: 3.41 B/s (using 62 data points, chi2=0.00)
[2025-10-12 17:56:04] 2025-10-12 21:55:02,915 | INFO     | could have reported an average CPU frequency of 2104 MHz (7 samples)
[2025-10-12 17:56:04] 2025-10-12 21:55:02,915 | INFO     | ..............................
[2025-10-12 17:56:04] 2025-10-12 21:55:02,915 | INFO     | . Timing measurements:
[2025-10-12 17:56:04] 2025-10-12 21:55:02,915 | INFO     | . get job = 0 s
[2025-10-12 17:56:04] 2025-10-12 21:55:02,916 | INFO     | . initial setup = 2 s
[2025-10-12 17:56:04] 2025-10-12 21:55:02,916 | INFO     | . payload setup = 7 s
[2025-10-12 17:56:04] 2025-10-12 21:55:02,916 | INFO     | . stage-in = 0 s
[2025-10-12 17:56:04] 2025-10-12 21:55:02,916 | INFO     | . payload execution = 6577 s
[2025-10-12 17:56:04] 2025-10-12 21:55:02,916 | INFO     | . stage-out = 0 s
[2025-10-12 17:56:04] 2025-10-12 21:55:02,916 | INFO     | . log creation = 0 s
[2025-10-12 17:56:04] 2025-10-12 21:55:02,916 | INFO     | ..............................
[2025-10-12 17:56:04] 2025-10-12 21:55:03,204 | INFO     | 
[2025-10-12 17:56:04] 2025-10-12 21:55:03,205 | INFO     | job summary report
[2025-10-12 17:56:04] 2025-10-12 21:55:03,205 | INFO     | --------------------------------------------------
[2025-10-12 17:56:04] 2025-10-12 21:55:03,205 | INFO     | PanDA job id: 6840390927
[2025-10-12 17:56:04] 2025-10-12 21:55:03,205 | INFO     | task id: 46676269
[2025-10-12 17:56:04] 2025-10-12 21:55:03,205 | INFO     | errors: (none)
[2025-10-12 17:56:04] 2025-10-12 21:55:03,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:56:04] 2025-10-12 21:55:03,206 | INFO     | pilot state: finished 
[2025-10-12 17:56:04] 2025-10-12 21:55:03,206 | INFO     | transexitcode: 0
[2025-10-12 17:56:04] 2025-10-12 21:55:03,206 | INFO     | exeerrorcode: 0
[2025-10-12 17:56:04] 2025-10-12 21:55:03,207 | INFO     | exeerrordiag: 
[2025-10-12 17:56:04] 2025-10-12 21:55:03,207 | INFO     | exitcode: 0
[2025-10-12 17:56:04] 2025-10-12 21:55:03,207 | INFO     | exitmsg: OK
[2025-10-12 17:56:04] 2025-10-12 21:55:03,207 | INFO     | cpuconsumptiontime: 49049 s
[2025-10-12 17:56:04] 2025-10-12 21:55:03,207 | INFO     | nevents: 400
[2025-10-12 17:56:04] 2025-10-12 21:55:03,208 | INFO     | neventsw: 0
[2025-10-12 17:56:04] 2025-10-12 21:55:03,208 | INFO     | pid: 21225
[2025-10-12 17:56:04] 2025-10-12 21:55:03,208 | INFO     | pgrp: 21225
[2025-10-12 17:56:04] 2025-10-12 21:55:03,208 | INFO     | corecount: 8
[2025-10-12 17:56:04] 2025-10-12 21:55:03,209 | INFO     | event service: False
[2025-10-12 17:56:04] 2025-10-12 21:55:03,209 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6588: 2376232, 6590: 2385230, 6593: 2385286, 6598: 2385608}
[2025-10-12 17:56:04] 2025-10-12 21:55:03,209 | INFO     | --------------------------------------------------
[2025-10-12 17:56:04] 2025-10-12 21:55:03,209 | INFO     | 
[2025-10-12 17:56:04] 2025-10-12 21:55:03,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:56:04] 2025-10-12 21:55:03,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,244 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,245 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,245 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,245 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,245 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:56:04] 2025-10-12 21:55:03,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:56:04] 2025-10-12 21:55:03,246 | INFO     | job 6840390927 has completed (purged errors)
[2025-10-12 17:56:04] 2025-10-12 21:55:03,247 | INFO     | overall cleanup function is called
[2025-10-12 17:56:04] 2025-10-12 21:55:04,255 | INFO     | --- collectZombieJob: --- 10, [21225]
[2025-10-12 17:56:04] 2025-10-12 21:55:04,256 | INFO     | zombie collector waiting for pid 21225
[2025-10-12 17:56:04] 2025-10-12 21:55:04,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:56:04] 2025-10-12 21:55:04,256 | INFO     | collected zombie processes
[2025-10-12 17:56:04] 2025-10-12 21:55:04,256 | INFO     | will attempt to kill all subprocesses of pid=21225
[2025-10-12 17:56:04] 2025-10-12 21:55:04,347 | INFO     | process IDs to be killed: [21225] (in reverse order)
[2025-10-12 17:56:04] 2025-10-12 21:55:04,408 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:56:04] 2025-10-12 21:55:04,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:56:04] 2025-10-12 21:55:04,411 | INFO     | did not find any defunct processes belonging to 21225
[2025-10-12 17:56:04] 2025-10-12 21:55:04,415 | INFO     | did not find any defunct processes belonging to 21225
[2025-10-12 17:56:04] 2025-10-12 21:55:04,415 | INFO     | ready for new job
[2025-10-12 17:56:04] 2025-10-12 21:55:04,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:56:04] 2025-10-12 21:55:04,417 | INFO     | ***************************************
[2025-10-12 17:56:04] 2025-10-12 21:55:04,417 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:56:04] 2025-10-12 21:55:04,418 | INFO     | ***************************************
[2025-10-12 17:56:04] 2025-10-12 21:55:04,418 | INFO     | 
[2025-10-12 17:56:04] 2025-10-12 21:55:04,418 | INFO     | architecture information:
[2025-10-12 17:56:04] 2025-10-12 21:55:04,419 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:56:04] 2025-10-12 21:55:04,441 | INFO     | cat /etc/os-release:
[2025-10-12 17:56:04] NAME="CentOS Linux"
[2025-10-12 17:56:04] VERSION="7 (Core)"
[2025-10-12 17:56:04] ID="centos"
[2025-10-12 17:56:04] ID_LIKE="rhel fedora"
[2025-10-12 17:56:04] VERSION_ID="7"
[2025-10-12 17:56:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:56:04] ANSI_COLOR="0;31"
[2025-10-12 17:56:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:56:04] HOME_URL="https://www.centos.org/"
[2025-10-12 17:56:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:56:04] 
[2025-10-12 17:56:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:56:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:56:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:56:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:56:04] 
[2025-10-12 17:56:04] 2025-10-12 21:55:04,442 | INFO     | ***************************************
[2025-10-12 17:56:04] 2025-10-12 21:55:04,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:56:04] 2025-10-12 21:55:04,967 | INFO     | sufficient remaining disk space (18596495360 B)
[2025-10-12 17:56:04] 2025-10-12 21:55:04,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:56:04] 2025-10-12 21:55:04,968 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:56:04] 2025-10-12 21:55:04,968 | INFO     | update_server=False
[2025-10-12 17:56:04] 2025-10-12 21:55:04,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:56:04] 2025-10-12 21:55:04,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:56:04] 2025-10-12 21:55:04,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:56:04] 2025-10-12 21:55:04,969 | INFO     | aborting loop
[2025-10-12 17:56:04] 2025-10-12 21:55:05,054 | INFO     | all payload control threads have been joined
[2025-10-12 17:56:04] 2025-10-12 21:55:05,655 | INFO     | all data control threads have been joined
[2025-10-12 17:56:04] 2025-10-12 21:55:05,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:56:04] 2025-10-12 21:55:05,939 | INFO     | all job control threads have been joined
[2025-10-12 17:56:04] 2025-10-12 21:55:05,973 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:05,974 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:05,975 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:06,060 | INFO     | [payload] control thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:06,172 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:06,660 | INFO     | [data] control thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:06,824 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:06,945 | INFO     | [job] control thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:07,219 | INFO     | [job] validate thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:07,242 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:07,300 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:07,306 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:07,432 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:07,795 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:07,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:56:04] 2025-10-12 21:55:11,948 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:15,465 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:56:04] 2025-10-12 21:55:16,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:56:04] 2025-10-12 21:55:34,957 | INFO     | PID=12813 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:56:04] 2025-10-12 21:55:34,958 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:56:04] 2025-10-12 21:55:34,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:56:04] 2025-10-12 21:55:34,958 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:56:04] 2025-10-12 21:55:57,868 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:56:04] 2025-10-12 21:55:59,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704421357376)>', '<ExcThread(monitor, started 140703329941248)>']
[2025-10-12 17:56:04] 2025-10-12 21:56:00,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:56:04] 2025-10-12 21:56:00,083 | INFO     | [monitor] control thread has ended
[2025-10-12 17:56:04] 2025-10-12 21:56:04,624 | INFO     | all workflow threads have been joined
[2025-10-12 17:56:04] 2025-10-12 21:56:04,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:56:04] 2025-10-12 21:56:04,625 | INFO     | traces error code: 0
[2025-10-12 17:56:04] 2025-10-12 21:56:04,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:56:04] 2025-10-12 21:56:04,735 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:56:04] 2025-10-12 21:56:04,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:56:04] 2025-10-12 21:56:04,745 [wrapper] pilotpid: 12813
[2025-10-12 17:56:04] 2025-10-12 21:56:04,750 [wrapper] Pilot exit status: 0
[2025-10-12 17:56:04] 2025-10-12 21:56:04,771 [wrapper] pandaids: 6840390927
[2025-10-12 17:56:04] 2025-10-12 21:56:04,827 [wrapper] cleanup supervisor_pilot 20799 12814
[2025-10-12 17:56:04] 2025-10-12 21:56:04,832 [wrapper] Test setup, not cleaning
[2025-10-12 17:56:04] 2025-10-12 21:56:04,837 [wrapper] apfmon messages muted
[2025-10-12 17:56:04] 2025-10-12 21:56:04,841 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:56:04] 2025-10-12 21:56:04,845 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:56:04]  *** Error codes and diagnostics ***
[2025-10-12 17:56:04]     "exeErrorCode": 0,
[2025-10-12 17:56:04]     "exeErrorDiag": "",
[2025-10-12 17:56:04]     "pilotErrorCode": 0,
[2025-10-12 17:56:04]     "pilotErrorDiag": "",
[2025-10-12 17:56:04]  *** Listing of results directory ***
[2025-10-12 17:56:05] total 407388
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 17:56:05] -rwx------ 1 boincer umatlas     36292 Oct 12 12:37 runpilot2-wrapper.sh
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:37 queuedata.json
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:56:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:04 run_atlas
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:04 job.xml
[2025-10-12 17:56:05] -rw-r--r-- 2 boincer umatlas 218691795 Oct 12 16:04 EVNT.46676267._004750.pool.root.1
[2025-10-12 17:56:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:04 start_atlas.sh
[2025-10-12 17:56:05] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:04 shared
[2025-10-12 17:56:05] -rw-r--r-- 2 boincer umatlas    569674 Oct 12 16:04 input.tar.gz
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:04 boinc_lockfile
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 16:04 pandaJob.out
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas    975536 Oct 12 16:04 agis_schedconf.cvmfs.json
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas   1560580 Oct 12 16:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:56:05] drwx------ 5 boincer umatlas      4096 Oct 12 16:04 pilot3
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas      5908 Oct 12 17:45 init_data.xml
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas 191970692 Oct 12 17:54 HITS.46676269._083699.pool.root.1
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:54 boinc_task_state.xml
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas      1049 Oct 12 17:54 memory_monitor_summary.json
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas    357010 Oct 12 17:54 log.46676269._083699.job.log.tgz.1
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas      7838 Oct 12 17:55 heartbeat.json
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas        95 Oct 12 17:55 pilot_heartbeat.json
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:55 boinc_mmap_file
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:55 wrapper_checkpoint.txt
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas      4818 Oct 12 17:56 pilotlog.txt
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas    939854 Oct 12 17:56 log.46676269._083699.job.log.1
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas       357 Oct 12 17:56 output.list
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:56 runtime_log
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas   1320960 Oct 12 17:56 result.tar.gz
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 17:56 runtime_log.err
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas       657 Oct 12 17:56 alILDmOFES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUQUMDmVXGGan.diag
[2025-10-12 17:56:05] -rw-r--r-- 1 boincer umatlas     20851 Oct 12 17:56 stderr.txt
[2025-10-12 17:56:05] HITS file was successfully produced:
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas 191970692 Oct 12 17:54 shared/HITS.pool.root.1
[2025-10-12 17:56:05]  *** Contents of shared directory: ***
[2025-10-12 17:56:05] total 402912
[2025-10-12 17:56:05] -rw-r--r-- 2 boincer umatlas 218691795 Oct 12 16:04 ATLAS.root_0
[2025-10-12 17:56:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:04 start_atlas.sh
[2025-10-12 17:56:05] -rw-r--r-- 2 boincer umatlas    569674 Oct 12 16:04 input.tar.gz
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas 191970692 Oct 12 17:54 HITS.pool.root.1
[2025-10-12 17:56:05] -rw------- 1 boincer umatlas   1320960 Oct 12 17:56 result.tar.gz
17:56:06 (9127): run_atlas exited; CPU time 49051.238317
17:56:06 (9127): called boinc_finish(0)

</stderr_txt>
]]>

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