Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:56 (1141672): wrapper (7.7.26015): starting
00:04:56 (1141672): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:04:56] Arguments: --nthreads 9
[2025-10-13 00:04:56] Threads: 9
[2025-10-13 00:04:56] Checking for CVMFS
[2025-10-13 00:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:58] 2.13.2.0 116703 139047 331000 151647 1 675 20679816 32935936 21051 16776704 0 95664729 99.671 88844818 30312 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:04:58] CVMFS is ok
[2025-10-13 00:04:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:58] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:58] Checking for apptainer binary...
[2025-10-13 00:04:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:58] Running /usr/bin/apptainer --version
[2025-10-13 00:04:58] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:58] c-5-3.aglt2.org
[2025-10-13 00:04:58] apptainer works
[2025-10-13 00:04:58] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:04:58] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:04:58] Starting ATLAS job with PandaID=6840081382
[2025-10-13 00:04:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:58:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:58:01] 2025-10-13 10:57:03,798 | INFO     | sum of square deviations: 19256442701.54539
[2025-10-13 06:58:01] 2025-10-13 10:57:03,806 | INFO     | sum of deviations: 190707466311.13635
[2025-10-13 06:58:01] 2025-10-13 10:57:03,807 | INFO     | mean x: 1760340517.7727273
[2025-10-13 06:58:01] 2025-10-13 10:57:03,807 | INFO     | mean y: 2130949.123737374
[2025-10-13 06:58:01] 2025-10-13 10:57:03,807 | INFO     | -- intersect: -17431518930.681366
[2025-10-13 06:58:01] 2025-10-13 10:57:03,811 | INFO     | intersect: -17431518930.681366
[2025-10-13 06:58:01] 2025-10-13 10:57:03,812 | INFO     | chi2: 4.386910680203517
[2025-10-13 06:58:01] 2025-10-13 10:57:03,812 | INFO     | current chi2=4.386910680203517 (change=3.176280340173859 %)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,812 | INFO     | right removable region: 395
[2025-10-13 06:58:01] 2025-10-13 10:57:03,813 | INFO     | sum of square deviations: 19256182594.444572
[2025-10-13 06:58:01] 2025-10-13 10:57:03,821 | INFO     | sum of deviations: 82422735813.11113
[2025-10-13 06:58:01] 2025-10-13 10:57:03,821 | INFO     | mean x: 1760340822.7777777
[2025-10-13 06:58:01] 2025-10-13 10:57:03,821 | INFO     | mean y: 2148649.126262626
[2025-10-13 06:58:01] 2025-10-13 10:57:03,821 | INFO     | -- intersect: -7532683650.329948
[2025-10-13 06:58:01] 2025-10-13 10:57:03,821 | INFO     | intersect: -7532683650.329948
[2025-10-13 06:58:01] 2025-10-13 10:57:03,822 | INFO     | chi2: 1.53806112063981
[2025-10-13 06:58:01] 2025-10-13 10:57:03,822 | INFO     | current chi2=1.53806112063981 (change=66.05337796446808 %)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,823 | INFO     | sum of square deviations: 18535858538.3427
[2025-10-13 06:58:01] 2025-10-13 10:57:03,831 | INFO     | sum of deviations: 29327135048.419434
[2025-10-13 06:58:01] 2025-10-13 10:57:03,835 | INFO     | mean x: 1760340975.2890027
[2025-10-13 06:58:01] 2025-10-13 10:57:03,835 | INFO     | mean y: 2159891.5626598466
[2025-10-13 06:58:01] 2025-10-13 10:57:03,835 | INFO     | -- intersect: -2783023077.263711
[2025-10-13 06:58:01] 2025-10-13 10:57:03,835 | INFO     | intersect: -2783023077.263711
[2025-10-13 06:58:01] 2025-10-13 10:57:03,836 | INFO     | chi2: 0.7049655056191098
[2025-10-13 06:58:01] 2025-10-13 10:57:03,836 | INFO     | current chi2=0.7049655056191098 (change=54.16531266807818 %)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,837 | INFO     | sum of square deviations: 17833696773.036304
[2025-10-13 06:58:01] 2025-10-13 10:57:03,843 | INFO     | time since job start (24683s) is within the limit (172800.0s)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,845 | INFO     | sum of deviations: -1337597011.0984497
[2025-10-13 06:58:01] 2025-10-13 10:57:03,845 | INFO     | mean x: 1760341127.8031087
[2025-10-13 06:58:01] 2025-10-13 10:57:03,845 | INFO     | mean y: 2166556.748704663
[2025-10-13 06:58:01] 2025-10-13 10:57:03,846 | INFO     | -- intersect: 134199026.57420912
[2025-10-13 06:58:01] 2025-10-13 10:57:03,846 | INFO     | intersect: 134199026.57420912
[2025-10-13 06:58:01] 2025-10-13 10:57:03,846 | INFO     | chi2: 0.41633559243327734
[2025-10-13 06:58:01] 2025-10-13 10:57:03,846 | INFO     | current chi2=0.41633559243327734 (change=40.94241645658307 %)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,851 | INFO     | sum of square deviations: 17149583141.070917
[2025-10-13 06:58:01] 2025-10-13 10:57:03,859 | INFO     | sum of deviations: -16573258855.125984
[2025-10-13 06:58:01] 2025-10-13 10:57:03,859 | INFO     | mean x: 1760341280.3070867
[2025-10-13 06:58:01] 2025-10-13 10:57:03,860 | INFO     | mean y: 2169939.7874015747
[2025-10-13 06:58:01] 2025-10-13 10:57:03,860 | INFO     | -- intersect: 1703353663.7243445
[2025-10-13 06:58:01] 2025-10-13 10:57:03,860 | INFO     | intersect: 1703353663.7243445
[2025-10-13 06:58:01] 2025-10-13 10:57:03,860 | INFO     | chi2: 0.3144835062625713
[2025-10-13 06:58:01] 2025-10-13 10:57:03,861 | INFO     | current chi2=0.3144835062625713 (change=24.46393919276287 %)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,861 | INFO     | left removable region: 40
[2025-10-13 06:58:01] 2025-10-13 10:57:03,861 | INFO     | sum of square deviations: 13873053739.53246
[2025-10-13 06:58:01] 2025-10-13 10:57:03,869 | INFO     | sum of deviations: -11505174009.97183
[2025-10-13 06:58:01] 2025-10-13 10:57:03,869 | INFO     | mean x: 1760341707.3070424
[2025-10-13 06:58:01] 2025-10-13 10:57:03,869 | INFO     | mean y: 2175092.7887323946
[2025-10-13 06:58:01] 2025-10-13 10:57:03,869 | INFO     | -- intersect: 1462058261.9763243
[2025-10-13 06:58:01] 2025-10-13 10:57:03,869 | INFO     | intersect: 1462058261.9763243
[2025-10-13 06:58:01] 2025-10-13 10:57:03,870 | INFO     | chi2: 0.1670504814497302
[2025-10-13 06:58:01] 2025-10-13 10:57:03,870 | INFO     | -- intersect: 1462058261.9763243
[2025-10-13 06:58:01] 2025-10-13 10:57:03,870 | INFO     | current memory leak: -0.83 B/s (using 355 data points, chi2=0.17)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,871 | INFO     | could have reported an average CPU frequency of 2599 MHz (17 samples)
[2025-10-13 06:58:01] 2025-10-13 10:57:03,875 | INFO     | ..............................
[2025-10-13 06:58:01] 2025-10-13 10:57:03,875 | INFO     | . Timing measurements:
[2025-10-13 06:58:01] 2025-10-13 10:57:03,875 | INFO     | . get job = 0 s
[2025-10-13 06:58:01] 2025-10-13 10:57:03,876 | INFO     | . initial setup = 5 s
[2025-10-13 06:58:01] 2025-10-13 10:57:03,876 | INFO     | . payload setup = 37 s
[2025-10-13 06:58:01] 2025-10-13 10:57:03,876 | INFO     | . stage-in = 0 s
[2025-10-13 06:58:01] 2025-10-13 10:57:03,876 | INFO     | . payload execution = 24490 s
[2025-10-13 06:58:01] 2025-10-13 10:57:03,876 | INFO     | . stage-out = 14 s
[2025-10-13 06:58:01] 2025-10-13 10:57:03,876 | INFO     | . log creation = 0 s
[2025-10-13 06:58:01] 2025-10-13 10:57:03,876 | INFO     | ..............................
[2025-10-13 06:58:01] 2025-10-13 10:57:05,010 | INFO     | 
[2025-10-13 06:58:01] 2025-10-13 10:57:05,011 | INFO     | job summary report
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | --------------------------------------------------
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | PanDA job id: 6840081382
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | task id: 46676269
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | errors: (none)
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | pilot state: finished 
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | transexitcode: 0
[2025-10-13 06:58:01] 2025-10-13 10:57:05,012 | INFO     | exeerrorcode: 0
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | exeerrordiag: 
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | exitcode: 0
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | exitmsg: OK
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | cpuconsumptiontime: 48661 s
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | nevents: 400
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | neventsw: 0
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | pid: 1166645
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | pgrp: 1166645
[2025-10-13 06:58:01] 2025-10-13 10:57:05,013 | INFO     | corecount: 9
[2025-10-13 06:58:01] 2025-10-13 10:57:05,014 | INFO     | event service: False
[2025-10-13 06:58:01] 2025-10-13 10:57:05,014 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348913, 13: 2348913, 24: 2348969, 26: 2349259, 35: 2349415, 24533: 2384293, 24534: 2384292, 24550: 2393346, 24552: 2393402, 246
[2025-10-13 06:58:01] 2025-10-13 10:57:05,014 | INFO     | --------------------------------------------------
[2025-10-13 06:58:01] 2025-10-13 10:57:05,088 | INFO     | 
[2025-10-13 06:58:01] 2025-10-13 10:57:05,088 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:58:01] 2025-10-13 10:57:05,386 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,387 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:58:01] 2025-10-13 10:57:05,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:58:01] 2025-10-13 10:57:05,389 | INFO     | job 6840081382 has completed (purged errors)
[2025-10-13 06:58:01] 2025-10-13 10:57:05,389 | INFO     | overall cleanup function is called
[2025-10-13 06:58:01] 2025-10-13 10:57:06,456 | INFO     | --- collectZombieJob: --- 10, [1166645]
[2025-10-13 06:58:01] 2025-10-13 10:57:06,456 | INFO     | zombie collector waiting for pid 1166645
[2025-10-13 06:58:01] 2025-10-13 10:57:06,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:58:01] 2025-10-13 10:57:06,480 | INFO     | collected zombie processes
[2025-10-13 06:58:01] 2025-10-13 10:57:06,480 | INFO     | will attempt to kill all subprocesses of pid=1166645
[2025-10-13 06:58:01] 2025-10-13 10:57:07,966 | INFO     | process IDs to be killed: [1166645] (in reverse order)
[2025-10-13 06:58:01] 2025-10-13 10:57:08,198 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:58:01] 2025-10-13 10:57:08,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:58:01] 2025-10-13 10:57:08,303 | INFO     | did not find any defunct processes belonging to 1166645
[2025-10-13 06:58:01] 2025-10-13 10:57:08,338 | INFO     | did not find any defunct processes belonging to 1166645
[2025-10-13 06:58:01] 2025-10-13 10:57:08,338 | INFO     | ready for new job
[2025-10-13 06:58:01] 2025-10-13 10:57:08,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:58:01] 2025-10-13 10:57:08,345 | INFO     | ***************************************
[2025-10-13 06:58:01] 2025-10-13 10:57:08,346 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:58:01] 2025-10-13 10:57:08,346 | INFO     | ***************************************
[2025-10-13 06:58:01] 2025-10-13 10:57:08,346 | INFO     | 
[2025-10-13 06:58:01] 2025-10-13 10:57:08,364 | INFO     | architecture information:
[2025-10-13 06:58:01] 2025-10-13 10:57:08,365 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:58:01] 2025-10-13 10:57:08,538 | INFO     | cat /etc/os-release:
[2025-10-13 06:58:01] NAME="CentOS Linux"
[2025-10-13 06:58:01] VERSION="7 (Core)"
[2025-10-13 06:58:01] ID="centos"
[2025-10-13 06:58:01] ID_LIKE="rhel fedora"
[2025-10-13 06:58:01] VERSION_ID="7"
[2025-10-13 06:58:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:58:01] ANSI_COLOR="0;31"
[2025-10-13 06:58:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:58:01] HOME_URL="https://www.centos.org/"
[2025-10-13 06:58:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:58:01] 
[2025-10-13 06:58:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:58:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:58:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:58:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:58:01] 
[2025-10-13 06:58:01] 2025-10-13 10:57:08,539 | INFO     | ***************************************
[2025-10-13 06:58:01] 2025-10-13 10:57:09,042 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:58:01] 2025-10-13 10:57:09,188 | INFO     | sufficient remaining disk space (74690068480 B)
[2025-10-13 06:58:01] 2025-10-13 10:57:09,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:58:01] 2025-10-13 10:57:09,188 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:58:01] 2025-10-13 10:57:09,188 | INFO     | update_server=False
[2025-10-13 06:58:01] 2025-10-13 10:57:09,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:58:01] 2025-10-13 10:57:09,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:58:01] 2025-10-13 10:57:09,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:58:01] 2025-10-13 10:57:09,678 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:58:01] 2025-10-13 10:57:09,678 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:58:01] 2025-10-13 10:57:09,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:58:01] 2025-10-13 10:57:09,679 | INFO     | will abort loop
[2025-10-13 06:58:01] 2025-10-13 10:57:10,032 | INFO     | all payload control threads have been joined
[2025-10-13 06:58:01] 2025-10-13 10:57:10,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:58:01] 2025-10-13 10:57:10,202 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:10,273 | INFO     | all data control threads have been joined
[2025-10-13 06:58:01] 2025-10-13 10:57:10,390 | INFO     | [job] validate thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:10,401 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:10,684 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:10,751 | INFO     | all job control threads have been joined
[2025-10-13 06:58:01] 2025-10-13 10:57:11,059 | INFO     | [payload] control thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,066 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,250 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,279 | INFO     | [data] control thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,292 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,293 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,300 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,700 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,713 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:11,778 | INFO     | [job] control thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:13,257 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:58:01] 2025-10-13 10:57:30,502 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:58:01] 2025-10-13 10:57:31,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176539789120)>', '<ExcThread(monitor, started 140175912986368)>']
[2025-10-13 06:58:01] 2025-10-13 10:57:36,083 | INFO     | all workflow threads have been joined
[2025-10-13 06:58:01] 2025-10-13 10:57:36,084 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:58:01] 2025-10-13 10:57:36,084 | INFO     | traces error code: 0
[2025-10-13 06:58:01] 2025-10-13 10:57:36,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:58:01] 2025-10-13 10:57:39,394 | INFO     | PID=1146240 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:58:01] 2025-10-13 10:57:39,395 | INFO     | .. there are 27 such processes running
[2025-10-13 06:58:01] 2025-10-13 10:57:39,395 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:58:01] 2025-10-13 10:57:39,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:58:01] 2025-10-13 10:57:39,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:58:01] 2025-10-13 10:57:39,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:58:01] 2025-10-13 10:57:39,405 | INFO     | [monitor] control thread has ended
[2025-10-13 06:58:01] 2025-10-13 10:57:39,964 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:58:01] 2025-10-13 10:57:39,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:58:01] 2025-10-13 10:57:39,992 [wrapper] pilotpid: 1146240
[2025-10-13 06:58:01] 2025-10-13 10:57:39,995 [wrapper] Pilot exit status: 0
[2025-10-13 06:58:01] 2025-10-13 10:57:40,139 [wrapper] pandaids: 6840081382
[2025-10-13 06:58:01] 2025-10-13 10:57:40,352 [wrapper] cleanup supervisor_pilot 2305421 1146241
[2025-10-13 06:58:01] 2025-10-13 10:57:40,389 [wrapper] Test setup, not cleaning
[2025-10-13 06:58:01] 2025-10-13 10:57:40,466 [wrapper] apfmon messages muted
[2025-10-13 06:58:01] 2025-10-13 10:57:40,526 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:58:01] 2025-10-13 10:57:40,553 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:58:01]  *** Error codes and diagnostics ***
[2025-10-13 06:58:01]     "exeErrorCode": 0,
[2025-10-13 06:58:01]     "exeErrorDiag": "",
[2025-10-13 06:58:01]     "pilotErrorCode": 0,
[2025-10-13 06:58:01]     "pilotErrorDiag": "",
[2025-10-13 06:58:01]  *** Listing of results directory ***
[2025-10-13 06:58:01] total 409504
[2025-10-13 06:58:01] -rwx------. 1 boincer umatlas     36292 Oct 12 09:45 runpilot2-wrapper.sh
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:45 queuedata.json
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:45 pilot3.tar.gz
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:58:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 06:58:01] -rw-r--r--. 2 boincer umatlas 218213812 Oct 13 00:04 EVNT.46676267._004001.pool.root.1
[2025-10-13 06:58:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 06:58:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 06:58:01] -rw-r--r--. 2 boincer umatlas    569670 Oct 13 00:04 input.tar.gz
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 06:58:01] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:54 boinc_task_state.xml
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas 190424819 Oct 13 06:54 HITS.46676269._079750.pool.root.1
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas      1042 Oct 13 06:55 memory_monitor_summary.json
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas    588087 Oct 13 06:55 log.46676269._079750.job.log.tgz.1
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas      7823 Oct 13 06:57 heartbeat.json
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas        95 Oct 13 06:57 pilot_heartbeat.json
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas      6704 Oct 13 06:57 init_data.xml
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas       823 Oct 13 06:57 pilotlog.txt
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas   2811250 Oct 13 06:57 log.46676269._079750.job.log.1
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas       357 Oct 13 06:57 output.list
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:57 runtime_log
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas   3420160 Oct 13 06:57 result.tar.gz
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 06:57 runtime_log.err
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas       655 Oct 13 06:57 NAQMDmTZBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm20TMDmAk6X6n.diag
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas        28 Oct 13 06:57 wrapper_checkpoint.txt
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:58 boinc_mmap_file
[2025-10-13 06:58:01] -rw-r--r--. 1 boincer umatlas     21115 Oct 13 06:58 stderr.txt
[2025-10-13 06:58:01] HITS file was successfully produced:
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas 190424819 Oct 13 06:54 shared/HITS.pool.root.1
[2025-10-13 06:58:01]  *** Contents of shared directory: ***
[2025-10-13 06:58:01] total 402984
[2025-10-13 06:58:01] -rw-r--r--. 2 boincer umatlas 218213812 Oct 13 00:04 ATLAS.root_0
[2025-10-13 06:58:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 06:58:01] -rw-r--r--. 2 boincer umatlas    569670 Oct 13 00:04 input.tar.gz
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas 190424819 Oct 13 06:54 HITS.pool.root.1
[2025-10-13 06:58:01] -rw-------. 1 boincer umatlas   3420160 Oct 13 06:57 result.tar.gz
06:58:02 (1141672): run_atlas exited; CPU time 49553.817956
06:58:02 (1141672): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN