Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:51:34 (2478863): wrapper (7.7.26015): starting
16:51:34 (2478863): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:51:35] Arguments: --nthreads 8
[2025-10-12 16:51:35] Threads: 8
[2025-10-12 16:51:35] Checking for CVMFS
[2025-10-12 16:51:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:51:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:51:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:51:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:51:37] 2.13.2.0 2554489 129744 376072 151636 3 391 38968888 40960000 16393 16776704 0 323258268 99.732 234294704 22297 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:51:37] CVMFS is ok
[2025-10-12 16:51:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:51:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:51:37] Further information can be found at the LHC@home message board.
[2025-10-12 16:51:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:51:37] Checking for apptainer binary...
[2025-10-12 16:51:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:51:37] Running /usr/bin/apptainer --version
[2025-10-12 16:51:37] apptainer version 1.4.3-1.el9
[2025-10-12 16:51:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:51:38] c7-13-33.aglt2.org
[2025-10-12 16:51:38] apptainer works
[2025-10-12 16:51:38] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:51:38] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:51:38] Starting ATLAS job with PandaID=6840392360
[2025-10-12 16:51:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:57:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:57:04] 2025-10-12 23:56:12,320 | INFO     | sum of square deviations: 1748854146.7247186
[2025-10-12 19:57:04] 2025-10-12 23:56:12,321 | INFO     | sum of deviations: 9689940262.286503
[2025-10-12 19:57:04] 2025-10-12 23:56:12,364 | INFO     | mean x: 1760307885.039326
[2025-10-12 19:57:04] 2025-10-12 23:56:12,365 | INFO     | mean y: 2319486.387640449
[2025-10-12 19:57:04] 2025-10-12 23:56:12,365 | INFO     | -- intersect: -9751082923.53208
[2025-10-12 19:57:04] 2025-10-12 23:56:12,365 | INFO     | intersect: -9751082923.53208
[2025-10-12 19:57:04] 2025-10-12 23:56:12,365 | INFO     | chi2: 4.383653990910689
[2025-10-12 19:57:04] 2025-10-12 23:56:12,366 | INFO     | sum of square deviations: 1605604886.8323739
[2025-10-12 19:57:04] 2025-10-12 23:56:12,366 | INFO     | sum of deviations: 30299505956.39308
[2025-10-12 19:57:04] 2025-10-12 23:56:12,367 | INFO     | mean x: 1760307732.549133
[2025-10-12 19:57:04] 2025-10-12 23:56:12,367 | INFO     | mean y: 2341046.9537572255
[2025-10-12 19:57:04] 2025-10-12 23:56:12,367 | INFO     | -- intersect: -33216575427.996914
[2025-10-12 19:57:04] 2025-10-12 23:56:12,367 | INFO     | intersect: -33216575427.996914
[2025-10-12 19:57:04] 2025-10-12 23:56:12,367 | INFO     | chi2: 3.033229862812838
[2025-10-12 19:57:04] 2025-10-12 23:56:12,367 | INFO     | current chi2=3.033229862812838 (change=30.805901444272184 %)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,367 | INFO     | sum of square deviations: 1470359827.7857175
[2025-10-12 19:57:04] 2025-10-12 23:56:12,368 | INFO     | sum of deviations: 29644510821.642857
[2025-10-12 19:57:04] 2025-10-12 23:56:12,368 | INFO     | mean x: 1760307580.0357144
[2025-10-12 19:57:04] 2025-10-12 23:56:12,368 | INFO     | mean y: 2340311.0595238097
[2025-10-12 19:57:04] 2025-10-12 23:56:12,368 | INFO     | -- intersect: -35487922765.81884
[2025-10-12 19:57:04] 2025-10-12 23:56:12,368 | INFO     | intersect: -35487922765.81884
[2025-10-12 19:57:04] 2025-10-12 23:56:12,369 | INFO     | chi2: 3.0382917348791216
[2025-10-12 19:57:04] 2025-10-12 23:56:12,369 | INFO     | current chi2=3.0382917348791216 (change=-0.1668805957748791 %)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,369 | INFO     | right removable region: 167
[2025-10-12 19:57:04] 2025-10-12 23:56:12,432 | INFO     | PID=2485665 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:57:04] 2025-10-12 23:56:12,432 | INFO     | .. there are 20 such processes running
[2025-10-12 19:57:04] 2025-10-12 23:56:12,436 | INFO     | monitor loop #714: job 0:6840392360 is in state 'finished'
[2025-10-12 19:57:04] 2025-10-12 23:56:12,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,436 | INFO     | sum of square deviations: 1605557062.7283306
[2025-10-12 19:57:04] 2025-10-12 23:56:12,437 | INFO     | sum of deviations: -32265284191.618504
[2025-10-12 19:57:04] 2025-10-12 23:56:12,437 | INFO     | mean x: 1760308037.5549133
[2025-10-12 19:57:04] 2025-10-12 23:56:12,437 | INFO     | mean y: 2363877.4335260116
[2025-10-12 19:57:04] 2025-10-12 23:56:12,437 | INFO     | -- intersect: 35377524570.87185
[2025-10-12 19:57:04] 2025-10-12 23:56:12,437 | INFO     | intersect: 35377524570.87185
[2025-10-12 19:57:04] 2025-10-12 23:56:12,438 | INFO     | chi2: 1.6835224548556944
[2025-10-12 19:57:04] 2025-10-12 23:56:12,438 | INFO     | current chi2=1.6835224548556944 (change=61.595453054771134 %)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,438 | INFO     | sum of square deviations: 1470306641.1428552
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | sum of deviations: -34086502382.142853
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | mean x: 1760308190.0714285
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | mean y: 2365835.095238095
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | -- intersect: 40812049771.18613
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | intersect: 40812049771.18613
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | chi2: 1.632624320671758
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | current chi2=1.632624320671758 (change=3.023311868346854 %)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | left removable region: 20
[2025-10-12 19:57:04] 2025-10-12 23:56:12,439 | INFO     | sum of square deviations: 984977938.136056
[2025-10-12 19:57:04] 2025-10-12 23:56:12,444 | INFO     | sum of deviations: 2612403865.5578246
[2025-10-12 19:57:04] 2025-10-12 23:56:12,444 | INFO     | mean x: 1760308159.5646257
[2025-10-12 19:57:04] 2025-10-12 23:56:12,444 | INFO     | mean y: 2369300.4149659863
[2025-10-12 19:57:04] 2025-10-12 23:56:12,444 | INFO     | -- intersect: -4666401097.957545
[2025-10-12 19:57:04] 2025-10-12 23:56:12,444 | INFO     | intersect: -4666401097.957545
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | chi2: 0.03494500830567091
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | -- intersect: -4666401097.957545
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | current memory leak: 2.65 B/s (using 147 data points, chi2=0.03)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | could have reported an average CPU frequency of 3274 MHz (9 samples)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | ..............................
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | . Timing measurements:
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | . get job = 0 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | . initial setup = 5 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,445 | INFO     | . payload setup = 34 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,446 | INFO     | . stage-in = 0 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,446 | INFO     | . payload execution = 10855 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,446 | INFO     | . stage-out = 5 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,446 | INFO     | . log creation = 0 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,446 | INFO     | ..............................
[2025-10-12 19:57:04] 2025-10-12 23:56:12,801 | INFO     | 
[2025-10-12 19:57:04] 2025-10-12 23:56:12,801 | INFO     | job summary report
[2025-10-12 19:57:04] 2025-10-12 23:56:12,801 | INFO     | --------------------------------------------------
[2025-10-12 19:57:04] 2025-10-12 23:56:12,801 | INFO     | PanDA job id: 6840392360
[2025-10-12 19:57:04] 2025-10-12 23:56:12,801 | INFO     | task id: 46676269
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | errors: (none)
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | pilot state: finished 
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | transexitcode: 0
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | exeerrorcode: 0
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | exeerrordiag: 
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | exitcode: 0
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | exitmsg: OK
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | cpuconsumptiontime: 31641 s
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | nevents: 400
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | neventsw: 0
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | pid: 2504559
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | pgrp: 2504559
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | corecount: 8
[2025-10-12 19:57:04] 2025-10-12 23:56:12,802 | INFO     | event service: False
[2025-10-12 19:57:04] 2025-10-12 23:56:12,803 | INFO     | sizes: {0: 2348857, 12: 2348857, 22: 2348885, 34: 2348913, 35: 2349203, 45: 2349231, 10894: 2378423, 10895: 2378422, 10901: 2387532, 10945: 2387734}
[2025-10-12 19:57:04] 2025-10-12 23:56:12,803 | INFO     | --------------------------------------------------
[2025-10-12 19:57:04] 2025-10-12 23:56:12,803 | INFO     | 
[2025-10-12 19:57:04] 2025-10-12 23:56:12,803 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 19:57:04] 2025-10-12 23:56:13,039 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | job 6840392360 has completed (purged errors)
[2025-10-12 19:57:04] 2025-10-12 23:56:13,041 | INFO     | overall cleanup function is called
[2025-10-12 19:57:04] 2025-10-12 23:56:14,062 | INFO     | --- collectZombieJob: --- 10, [2504559]
[2025-10-12 19:57:04] 2025-10-12 23:56:14,062 | INFO     | zombie collector waiting for pid 2504559
[2025-10-12 19:57:04] 2025-10-12 23:56:14,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:57:04] 2025-10-12 23:56:14,062 | INFO     | collected zombie processes
[2025-10-12 19:57:04] 2025-10-12 23:56:14,062 | INFO     | will attempt to kill all subprocesses of pid=2504559
[2025-10-12 19:57:04] 2025-10-12 23:56:14,819 | INFO     | process IDs to be killed: [2504559] (in reverse order)
[2025-10-12 19:57:04] 2025-10-12 23:56:15,557 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:57:04] 2025-10-12 23:56:15,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:57:04] 2025-10-12 23:56:15,633 | INFO     | did not find any defunct processes belonging to 2504559
[2025-10-12 19:57:04] 2025-10-12 23:56:15,715 | INFO     | did not find any defunct processes belonging to 2504559
[2025-10-12 19:57:04] 2025-10-12 23:56:15,715 | INFO     | ready for new job
[2025-10-12 19:57:04] 2025-10-12 23:56:15,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:57:04] 2025-10-12 23:56:15,717 | INFO     | ***************************************
[2025-10-12 19:57:04] 2025-10-12 23:56:15,717 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:57:04] 2025-10-12 23:56:15,717 | INFO     | ***************************************
[2025-10-12 19:57:04] 2025-10-12 23:56:15,718 | INFO     | 
[2025-10-12 19:57:04] 2025-10-12 23:56:15,751 | INFO     | architecture information:
[2025-10-12 19:57:04] 2025-10-12 23:56:15,775 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:57:04] 2025-10-12 23:56:15,861 | INFO     | cat /etc/os-release:
[2025-10-12 19:57:04] NAME="CentOS Linux"
[2025-10-12 19:57:04] VERSION="7 (Core)"
[2025-10-12 19:57:04] ID="centos"
[2025-10-12 19:57:04] ID_LIKE="rhel fedora"
[2025-10-12 19:57:04] VERSION_ID="7"
[2025-10-12 19:57:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:57:04] ANSI_COLOR="0;31"
[2025-10-12 19:57:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:57:04] HOME_URL="https://www.centos.org/"
[2025-10-12 19:57:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:57:04] 
[2025-10-12 19:57:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:57:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:57:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:57:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:57:04] 
[2025-10-12 19:57:04] 2025-10-12 23:56:15,861 | INFO     | ***************************************
[2025-10-12 19:57:04] 2025-10-12 23:56:16,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 19:57:04] 2025-10-12 23:56:16,388 | INFO     | sufficient remaining disk space (85269151744 B)
[2025-10-12 19:57:04] 2025-10-12 23:56:16,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:57:04] 2025-10-12 23:56:16,389 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:57:04] 2025-10-12 23:56:16,389 | INFO     | update_server=False
[2025-10-12 19:57:04] 2025-10-12 23:56:16,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:57:04] 2025-10-12 23:56:16,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:57:04] 2025-10-12 23:56:16,389 | INFO     | aborting loop
[2025-10-12 19:57:04] 2025-10-12 23:56:16,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:57:04] 2025-10-12 23:56:16,406 | INFO     | all data control threads have been joined
[2025-10-12 19:57:04] 2025-10-12 23:56:16,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:57:04] 2025-10-12 23:56:17,020 | INFO     | all payload control threads have been joined
[2025-10-12 19:57:04] 2025-10-12 23:56:17,396 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:17,413 | INFO     | [data] control thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:17,419 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:17,595 | INFO     | [job] validate thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:17,713 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:17,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:17,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:57:04] 2025-10-12 23:56:17,953 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:17,961 | INFO     | all job control threads have been joined
[2025-10-12 19:57:04] 2025-10-12 23:56:18,027 | INFO     | [payload] control thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:18,092 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:18,108 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:18,446 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:18,795 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:18,826 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:18,922 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:18,967 | INFO     | [job] control thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:20,413 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:57:04] 2025-10-12 23:56:45,664 | INFO     | PID=2485665 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:57:04] 2025-10-12 23:56:45,670 | INFO     | .. there are 20 such processes running
[2025-10-12 19:57:04] 2025-10-12 23:56:45,676 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:57:04] 2025-10-12 23:56:45,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:57:04] 2025-10-12 23:56:45,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:57:04] 2025-10-12 23:56:55,540 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:57:04] 2025-10-12 23:56:56,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708342273856)>', '<ExcThread(monitor, started 140707993990912)>']
[2025-10-12 19:57:04] 2025-10-12 23:56:57,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:57:04] 2025-10-12 23:56:57,757 | INFO     | [monitor] control thread has ended
[2025-10-12 19:57:04] 2025-10-12 23:57:01,920 | INFO     | all workflow threads have been joined
[2025-10-12 19:57:04] 2025-10-12 23:57:01,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:57:04] 2025-10-12 23:57:01,921 | INFO     | traces error code: 0
[2025-10-12 19:57:04] 2025-10-12 23:57:01,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:57:04] 2025-10-12 23:57:02,286 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:57:04] 2025-10-12 23:57:02,364 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:57:04] 2025-10-12 23:57:02,448 [wrapper] pilotpid: 2485665
[2025-10-12 19:57:04] 2025-10-12 23:57:02,494 [wrapper] Pilot exit status: 0
[2025-10-12 19:57:04] 2025-10-12 23:57:02,808 [wrapper] pandaids: 6840392360
[2025-10-12 19:57:04] 2025-10-12 23:57:03,406 [wrapper] cleanup supervisor_pilot 3076712 2485666
[2025-10-12 19:57:04] 2025-10-12 23:57:03,458 [wrapper] Test setup, not cleaning
[2025-10-12 19:57:04] 2025-10-12 23:57:03,474 [wrapper] apfmon messages muted
[2025-10-12 19:57:04] 2025-10-12 23:57:03,500 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:57:04] 2025-10-12 23:57:03,539 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:57:04]  *** Error codes and diagnostics ***
[2025-10-12 19:57:04]     "exeErrorCode": 0,
[2025-10-12 19:57:04]     "exeErrorDiag": "",
[2025-10-12 19:57:04]     "pilotErrorCode": 0,
[2025-10-12 19:57:04]     "pilotErrorDiag": "",
[2025-10-12 19:57:04]  *** Listing of results directory ***
[2025-10-12 19:57:04] total 411740
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 19:57:04] -rwx------. 1 boincer umatlas     36292 Oct 12 12:39 runpilot2-wrapper.sh
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:39 queuedata.json
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:57:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:51 run_atlas
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:51 job.xml
[2025-10-12 19:57:04] -rw-r--r--. 2 boincer umatlas 221043344 Oct 12 16:51 EVNT.46676267._004780.pool.root.1
[2025-10-12 19:57:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:51 start_atlas.sh
[2025-10-12 19:57:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:51 shared
[2025-10-12 19:57:04] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 16:51 input.tar.gz
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:51 boinc_lockfile
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:51 pandaJob.out
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas    975536 Oct 12 16:52 agis_schedconf.cvmfs.json
[2025-10-12 19:57:04] drwx------. 5 boincer umatlas      4096 Oct 12 16:52 pilot3
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas      6898 Oct 12 19:49 init_data.xml
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas 192989567 Oct 12 19:52 HITS.46676269._083821.pool.root.1
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas       531 Oct 12 19:52 boinc_task_state.xml
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas      1034 Oct 12 19:55 memory_monitor_summary.json
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas    408725 Oct 12 19:55 log.46676269._083821.job.log.tgz.1
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas      7784 Oct 12 19:56 heartbeat.json
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas        95 Oct 12 19:56 pilot_heartbeat.json
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:57 boinc_mmap_file
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas        28 Oct 12 19:57 wrapper_checkpoint.txt
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas      4824 Oct 12 19:57 pilotlog.txt
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas   1432322 Oct 12 19:57 log.46676269._083821.job.log.1
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas       357 Oct 12 19:57 output.list
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:57 runtime_log
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas   1863680 Oct 12 19:57 result.tar.gz
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas       656 Oct 12 19:57 W9sNDmLHES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUhkNDmnEqUim.diag
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 19:57 runtime_log.err
[2025-10-12 19:57:04] -rw-r--r--. 1 boincer umatlas     21208 Oct 12 19:57 stderr.txt
[2025-10-12 19:57:04] HITS file was successfully produced:
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas 192989567 Oct 12 19:52 shared/HITS.pool.root.1
[2025-10-12 19:57:04]  *** Contents of shared directory: ***
[2025-10-12 19:57:04] total 406736
[2025-10-12 19:57:04] -rw-r--r--. 2 boincer umatlas 221043344 Oct 12 16:51 ATLAS.root_0
[2025-10-12 19:57:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:51 start_atlas.sh
[2025-10-12 19:57:04] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 16:51 input.tar.gz
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas 192989567 Oct 12 19:52 HITS.pool.root.1
[2025-10-12 19:57:04] -rw-------. 1 boincer umatlas   1863680 Oct 12 19:57 result.tar.gz
19:57:05 (2478863): run_atlas exited; CPU time 31725.991950
19:57:05 (2478863): called boinc_finish(0)

</stderr_txt>
]]>

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