Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:40 (3553245): wrapper (7.7.26015): starting
17:20:40 (3553245): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 17:20:40] Arguments: --nthreads 11
[2025-10-12 17:20:40] Threads: 11
[2025-10-12 17:20:40] Checking for CVMFS
[2025-10-12 17:20:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:20:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:20:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:20:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:20:41] 2.13.2.0 128560 116508 191848 151638 0 65 29975851 39288833 5073 16776704 1 73611925 99.572 80452123 35345 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:20:41] CVMFS is ok
[2025-10-12 17:20:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:20:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:20:41] Further information can be found at the LHC@home message board.
[2025-10-12 17:20:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:20:41] Checking for apptainer binary...
[2025-10-12 17:20:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:20:41] Running /usr/bin/apptainer --version
[2025-10-12 17:20:41] apptainer version 1.4.3-1.el9
[2025-10-12 17:20:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:20:41] c-211-5.aglt2.org
[2025-10-12 17:20:41] apptainer works
[2025-10-12 17:20:41] Set ATHENA_PROC_NUMBER=11
[2025-10-12 17:20:41] Set ATHENA_CORE_NUMBER=11
[2025-10-12 17:20:41] Starting ATLAS job with PandaID=6839990810
[2025-10-12 17:20:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:57:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:57:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/3c/log.46676269._079246.job.log.tgz.1
[2025-10-12 18:57:13]  workdir=None
[2025-10-12 18:57:13] ]
[2025-10-12 18:57:13] 2025-10-12 22:56:21,799 | INFO     | transferring file log.46676269._079246.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839990810/log.46676269._079246.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 18:57:13] 2025-10-12 22:56:21,799 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839990810/log.46676269._079246.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._079246.job
[2025-10-12 18:57:13] 2025-10-12 22:56:21,821 | INFO     | adding to output.list: log.46676269._079246.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/3c/log.46676269._079246.job.log.tg
[2025-10-12 18:57:13] 2025-10-12 22:56:21,822 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:57:13] 2025-10-12 22:56:21,822 | INFO     | summary of transferred files:
[2025-10-12 18:57:13] 2025-10-12 22:56:21,822 | INFO     |  -- lfn=log.46676269._079246.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:57:13] 2025-10-12 22:56:21,822 | INFO     | stage-out finished correctly
[2025-10-12 18:57:13] 2025-10-12 22:56:22,331 | INFO     | monitor loop #270: job 0:6839990810 is in state 'finished'
[2025-10-12 18:57:13] 2025-10-12 22:56:22,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:57:13] 2025-10-12 22:56:22,906 | INFO     | time since job start (5726s) is within the limit (172800.0s)
[2025-10-12 18:57:13] 2025-10-12 22:56:24,787 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:57:13] 2025-10-12 22:56:24,844 | INFO     | monitor loop #271: job 0:6839990810 is in state 'finished'
[2025-10-12 18:57:13] 2025-10-12 22:56:24,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:57:13] 2025-10-12 22:56:24,915 | INFO     | time since job start (5728s) is within the limit (172800.0s)
[2025-10-12 18:57:13] 2025-10-12 22:56:25,927 | INFO     | job 6839990810 has state=finished
[2025-10-12 18:57:13] 2025-10-12 22:56:25,932 | INFO     | preparing for final server update for job 6839990810 in state='finished'
[2025-10-12 18:57:13] 2025-10-12 22:56:25,933 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:57:13] 2025-10-12 22:56:25,933 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:57:13] 2025-10-12 22:56:25,933 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:57:13] 2025-10-12 22:56:25,933 | INFO     | job 6839990810 has finished - writing final server update
[2025-10-12 18:57:13] 2025-10-12 22:56:25,934 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:57:13] 2025-10-12 22:56:25,934 | INFO     | executing command: lscpu
[2025-10-12 18:57:13] 2025-10-12 22:56:26,015 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:57:13] 2025-10-12 22:56:26,922 | INFO     | time since job start (5730s) is within the limit (172800.0s)
[2025-10-12 18:57:13] 2025-10-12 22:56:27,349 | INFO     | monitor loop #272: job 0:6839990810 is in state 'finished'
[2025-10-12 18:57:13] 2025-10-12 22:56:27,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:57:13] 2025-10-12 22:56:28,929 | INFO     | time since job start (5732s) is within the limit (172800.0s)
[2025-10-12 18:57:13] 2025-10-12 22:56:29,852 | INFO     | monitor loop #273: job 0:6839990810 is in state 'finished'
[2025-10-12 18:57:13] 2025-10-12 22:56:29,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:57:13] 2025-10-12 22:56:30,254 | INFO     | PID=3556891 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:57:13] 2025-10-12 22:56:30,254 | INFO     | .. there are 6 such processes running
[2025-10-12 18:57:13] 2025-10-12 22:56:31,255 | INFO     | time since job start (5735s) is within the limit (172800.0s)
[2025-10-12 18:57:13] 2025-10-12 22:56:31,656 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 18:57:13] 2025-10-12 22:56:31,663 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.179725
[2025-10-12 18:57:13] 2025-10-12 22:56:31,670 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839990810/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:57:13] 2025-10-12 22:56:31,671 | INFO     | extracted standard info from prmon json
[2025-10-12 18:57:13] 2025-10-12 22:56:31,671 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:57:13] 2025-10-12 22:56:31,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:57:13] 2025-10-12 22:56:31,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:57:13] 2025-10-12 22:56:31,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:57:13] 2025-10-12 22:56:31,675 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:57:13] 2025-10-12 22:56:31,675 | INFO     | sum of square deviations: 204163828.0
[2025-10-12 18:57:13] 2025-10-12 22:56:31,676 | INFO     | sum of deviations: -14524769596.999998
[2025-10-12 18:57:13] 2025-10-12 22:56:31,676 | INFO     | mean x: 1760307021.0
[2025-10-12 18:57:13] 2025-10-12 22:56:31,676 | INFO     | mean y: 2777835.7586206896
[2025-10-12 18:57:13] 2025-10-12 22:56:31,676 | INFO     | -- intersect: 125235803443.04904
[2025-10-12 18:57:13] 2025-10-12 22:56:31,676 | INFO     | intersect: 125235803443.04904
[2025-10-12 18:57:13] 2025-10-12 22:56:31,677 | INFO     | chi2: 0.09606914650362468
[2025-10-12 18:57:13] 2025-10-12 22:56:31,677 | INFO     | -- intersect: 125235803443.04904
[2025-10-12 18:57:13] 2025-10-12 22:56:31,677 | INFO     | current memory leak: -71.14 B/s (using 87 data points, chi2=0.10)
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | could have reported an average CPU frequency of 2600 MHz (6 samples)
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | ..............................
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | . Timing measurements:
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | . get job = 0 s
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | . initial setup = 2 s
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | . payload setup = 9 s
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | . stage-in = 0 s
[2025-10-12 18:57:13] 2025-10-12 22:56:31,678 | INFO     | . payload execution = 5691 s
[2025-10-12 18:57:13] 2025-10-12 22:56:31,679 | INFO     | . stage-out = 0 s
[2025-10-12 18:57:13] 2025-10-12 22:56:31,679 | INFO     | . log creation = 0 s
[2025-10-12 18:57:13] 2025-10-12 22:56:31,679 | INFO     | ..............................
[2025-10-12 18:57:13] 2025-10-12 22:56:32,033 | INFO     | 
[2025-10-12 18:57:13] 2025-10-12 22:56:32,034 | INFO     | job summary report
[2025-10-12 18:57:13] 2025-10-12 22:56:32,034 | INFO     | --------------------------------------------------
[2025-10-12 18:57:13] 2025-10-12 22:56:32,034 | INFO     | PanDA job id: 6839990810
[2025-10-12 18:57:13] 2025-10-12 22:56:32,034 | INFO     | task id: 46676269
[2025-10-12 18:57:13] 2025-10-12 22:56:32,034 | INFO     | errors: (none)
[2025-10-12 18:57:13] 2025-10-12 22:56:32,034 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | pilot state: finished 
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | transexitcode: 0
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | exeerrorcode: 0
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | exeerrordiag: 
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | exitcode: 0
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | exitmsg: OK
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | cpuconsumptiontime: 50591 s
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | nevents: 400
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | neventsw: 0
[2025-10-12 18:57:13] 2025-10-12 22:56:32,035 | INFO     | pid: 3563579
[2025-10-12 18:57:13] 2025-10-12 22:56:32,036 | INFO     | pgrp: 3563579
[2025-10-12 18:57:13] 2025-10-12 22:56:32,036 | INFO     | corecount: 11
[2025-10-12 18:57:13] 2025-10-12 22:56:32,036 | INFO     | event service: False
[2025-10-12 18:57:13] 2025-10-12 22:56:32,036 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 5705: 2374990, 5707: 2383988, 5710: 2384044, 5717: 2384196}
[2025-10-12 18:57:13] 2025-10-12 22:56:32,036 | INFO     | --------------------------------------------------
[2025-10-12 18:57:13] 2025-10-12 22:56:32,036 | INFO     | 
[2025-10-12 18:57:13] 2025-10-12 22:56:32,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:57:13] 2025-10-12 22:56:32,095 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:57:13] 2025-10-12 22:56:32,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:57:13] 2025-10-12 22:56:32,098 | INFO     | job 6839990810 has completed (purged errors)
[2025-10-12 18:57:13] 2025-10-12 22:56:32,098 | INFO     | overall cleanup function is called
[2025-10-12 18:57:13] 2025-10-12 22:56:33,107 | INFO     | --- collectZombieJob: --- 10, [3563579]
[2025-10-12 18:57:13] 2025-10-12 22:56:33,107 | INFO     | zombie collector waiting for pid 3563579
[2025-10-12 18:57:13] 2025-10-12 22:56:33,108 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:57:13] 2025-10-12 22:56:33,108 | INFO     | collected zombie processes
[2025-10-12 18:57:13] 2025-10-12 22:56:33,108 | INFO     | will attempt to kill all subprocesses of pid=3563579
[2025-10-12 18:57:13] 2025-10-12 22:56:33,348 | INFO     | process IDs to be killed: [3563579] (in reverse order)
[2025-10-12 18:57:13] 2025-10-12 22:56:33,419 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:57:13] 2025-10-12 22:56:33,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:57:13] 2025-10-12 22:56:33,428 | INFO     | did not find any defunct processes belonging to 3563579
[2025-10-12 18:57:13] 2025-10-12 22:56:33,436 | INFO     | did not find any defunct processes belonging to 3563579
[2025-10-12 18:57:13] 2025-10-12 22:56:33,436 | INFO     | ready for new job
[2025-10-12 18:57:13] 2025-10-12 22:56:33,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:57:13] 2025-10-12 22:56:33,438 | INFO     | ***************************************
[2025-10-12 18:57:13] 2025-10-12 22:56:33,438 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:57:13] 2025-10-12 22:56:33,438 | INFO     | ***************************************
[2025-10-12 18:57:13] 2025-10-12 22:56:33,439 | INFO     | 
[2025-10-12 18:57:13] 2025-10-12 22:56:33,441 | INFO     | architecture information:
[2025-10-12 18:57:13] 2025-10-12 22:56:33,441 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:57:13] 2025-10-12 22:56:33,458 | INFO     | cat /etc/os-release:
[2025-10-12 18:57:13] NAME="CentOS Linux"
[2025-10-12 18:57:13] VERSION="7 (Core)"
[2025-10-12 18:57:13] ID="centos"
[2025-10-12 18:57:13] ID_LIKE="rhel fedora"
[2025-10-12 18:57:13] VERSION_ID="7"
[2025-10-12 18:57:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:57:13] ANSI_COLOR="0;31"
[2025-10-12 18:57:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:57:13] HOME_URL="https://www.centos.org/"
[2025-10-12 18:57:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:57:13] 
[2025-10-12 18:57:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:57:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:57:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:57:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:57:13] 
[2025-10-12 18:57:13] 2025-10-12 22:56:33,459 | INFO     | ***************************************
[2025-10-12 18:57:13] 2025-10-12 22:56:33,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:57:13] 2025-10-12 22:56:33,981 | INFO     | sufficient remaining disk space (52537851904 B)
[2025-10-12 18:57:13] 2025-10-12 22:56:33,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:57:13] 2025-10-12 22:56:33,981 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:57:13] 2025-10-12 22:56:33,981 | INFO     | update_server=False
[2025-10-12 18:57:13] 2025-10-12 22:56:33,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:57:13] 2025-10-12 22:56:33,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:57:13] 2025-10-12 22:56:33,982 | INFO     | aborting loop
[2025-10-12 18:57:13] 2025-10-12 22:56:34,095 | INFO     | all data control threads have been joined
[2025-10-12 18:57:13] 2025-10-12 22:56:34,295 | INFO     | all job control threads have been joined
[2025-10-12 18:57:13] 2025-10-12 22:56:34,389 | INFO     | all payload control threads have been joined
[2025-10-12 18:57:13] 2025-10-12 22:56:34,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:57:13] 2025-10-12 22:56:34,987 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:34,988 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:34,994 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:35,101 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:35,102 | INFO     | [data] control thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:35,301 | INFO     | [job] control thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:35,394 | INFO     | [payload] control thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:35,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:57:13] 2025-10-12 22:56:35,985 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:35,989 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:36,104 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:36,298 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:36,444 | INFO     | [job] validate thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:36,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:57:13] 2025-10-12 22:56:36,988 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:37,816 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:39,493 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:56:44,979 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:57:13] 2025-10-12 22:56:45,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:57:13] 2025-10-12 22:57:04,583 | INFO     | PID=3556891 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:57:13] 2025-10-12 22:57:04,583 | INFO     | .. there are 6 such processes running
[2025-10-12 18:57:13] 2025-10-12 22:57:04,585 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:57:13] 2025-10-12 22:57:04,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:57:13] 2025-10-12 22:57:04,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:57:13] 2025-10-12 22:57:05,821 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:57:13] 2025-10-12 22:57:07,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643928008512)>', '<ExcThread(monitor, started 140643443656448)>']
[2025-10-12 18:57:13] 2025-10-12 22:57:08,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:57:13] 2025-10-12 22:57:08,608 | INFO     | [monitor] control thread has ended
[2025-10-12 18:57:13] 2025-10-12 22:57:12,852 | INFO     | all workflow threads have been joined
[2025-10-12 18:57:13] 2025-10-12 22:57:12,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:57:13] 2025-10-12 22:57:12,853 | INFO     | traces error code: 0
[2025-10-12 18:57:13] 2025-10-12 22:57:12,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:57:13] 2025-10-12 22:57:13,032 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:57:13] 2025-10-12 22:57:13,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:57:13] 2025-10-12 22:57:13,039 [wrapper] pilotpid: 3556891
[2025-10-12 18:57:13] 2025-10-12 22:57:13,042 [wrapper] Pilot exit status: 0
[2025-10-12 18:57:13] 2025-10-12 22:57:13,055 [wrapper] pandaids: 6839990810
[2025-10-12 18:57:13] 2025-10-12 22:57:13,105 [wrapper] cleanup supervisor_pilot 3716148 3556892
[2025-10-12 18:57:13] 2025-10-12 22:57:13,109 [wrapper] Test setup, not cleaning
[2025-10-12 18:57:13] 2025-10-12 22:57:13,113 [wrapper] apfmon messages muted
[2025-10-12 18:57:13] 2025-10-12 22:57:13,116 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:57:13] 2025-10-12 22:57:13,120 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:57:13]  *** Error codes and diagnostics ***
[2025-10-12 18:57:13]     "exeErrorCode": 0,
[2025-10-12 18:57:13]     "exeErrorDiag": "",
[2025-10-12 18:57:13]     "pilotErrorCode": 0,
[2025-10-12 18:57:13]     "pilotErrorDiag": "",
[2025-10-12 18:57:13]  *** Listing of results directory ***
[2025-10-12 18:57:13] total 412840
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:05 pilot3.tar.gz
[2025-10-12 18:57:13] -rwx------. 1 boincer umatlas     36292 Oct 12 09:15 runpilot2-wrapper.sh
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:15 queuedata.json
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:57:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:20 run_atlas
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:20 job.xml
[2025-10-12 18:57:13] -rw-r--r--. 2 boincer umatlas 219679653 Oct 12 17:20 EVNT.46676267._003859.pool.root.1
[2025-10-12 18:57:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:20 shared
[2025-10-12 18:57:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 17:20 input.tar.gz
[2025-10-12 18:57:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:20 start_atlas.sh
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:20 boinc_lockfile
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:20 pandaJob.out
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas    975528 Oct 12 17:20 agis_schedconf.cvmfs.json
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:57:13] drwx------. 5 boincer umatlas      4096 Oct 12 17:20 pilot3
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 18:49 init_data.xml
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas 197035122 Oct 12 18:55 HITS.46676269._079246.pool.root.1
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas       530 Oct 12 18:55 boinc_task_state.xml
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas      1034 Oct 12 18:56 memory_monitor_summary.json
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas    379548 Oct 12 18:56 log.46676269._079246.job.log.tgz.1
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas      7817 Oct 12 18:56 heartbeat.json
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas        95 Oct 12 18:57 pilot_heartbeat.json
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:57 boinc_mmap_file
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas        27 Oct 12 18:57 wrapper_checkpoint.txt
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas      4895 Oct 12 18:57 pilotlog.txt
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas    687977 Oct 12 18:57 log.46676269._079246.job.log.1
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas       357 Oct 12 18:57 output.list
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:57 runtime_log
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas   1085440 Oct 12 18:57 result.tar.gz
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas      8700 Oct 12 18:57 runtime_log.err
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas       651 Oct 12 18:57 mZEMDmP6AS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiyTMDmr7NDZm.diag
[2025-10-12 18:57:13] -rw-r--r--. 1 boincer umatlas     22348 Oct 12 18:57 stderr.txt
[2025-10-12 18:57:13] HITS file was successfully produced:
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas 197035122 Oct 12 18:55 shared/HITS.pool.root.1
[2025-10-12 18:57:13]  *** Contents of shared directory: ***
[2025-10-12 18:57:13] total 408592
[2025-10-12 18:57:13] -rw-r--r--. 2 boincer umatlas 219679653 Oct 12 17:20 ATLAS.root_0
[2025-10-12 18:57:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 17:20 input.tar.gz
[2025-10-12 18:57:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:20 start_atlas.sh
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas 197035122 Oct 12 18:55 HITS.pool.root.1
[2025-10-12 18:57:13] -rw-------. 1 boincer umatlas   1085440 Oct 12 18:57 result.tar.gz
18:57:14 (3553245): run_atlas exited; CPU time 50639.399645
18:57:14 (3553245): called boinc_finish(0)

</stderr_txt>
]]>

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