Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:44 (13080): wrapper (7.7.26015): starting
07:46:44 (13080): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:46:44] Arguments: --nthreads 8
[2025-10-13 07:46:44] Threads: 8
[2025-10-13 07:46:44] Checking for CVMFS
[2025-10-13 07:46:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:46:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:46:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:46:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:46:46] 2.11.2.0 3973 221588 142200 151650 0 61 17228876 25165824 4632 130560 0 127205353 99.875 72453455 3738 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 07:46:46] CVMFS is ok
[2025-10-13 07:46:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:46:46] Checking for apptainer binary...
[2025-10-13 07:46:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:46:46] Running /usr/bin/apptainer --version
[2025-10-13 07:46:46] apptainer version 1.3.2-1.el7
[2025-10-13 07:46:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:47:06] cg-vwn471.simple-grid.lan
[2025-10-13 07:47:06] apptainer works
[2025-10-13 07:47:06] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:47:06] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:47:06] Starting ATLAS job with PandaID=6829691843
[2025-10-13 07:47:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:21:24]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:21:24] 2025-10-13 09:20:16,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:21:24] 2025-10-13 09:20:16,586 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:21:24] 2025-10-13 09:20:16,586 | INFO     | sum of square deviations: 2370641658.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,588 | INFO     | sum of deviations: 40709135985.00001
[2025-10-13 11:21:24] 2025-10-13 09:20:16,588 | INFO     | mean x: 1760341105.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,588 | INFO     | mean y: 2447894.4162436547
[2025-10-13 11:21:24] 2025-10-13 09:20:16,588 | INFO     | -- intersect: -30226484083.387623
[2025-10-13 11:21:24] 2025-10-13 09:20:16,588 | INFO     | intersect: -30226484083.387623
[2025-10-13 11:21:24] 2025-10-13 09:20:16,589 | INFO     | chi2: 6.17944668406348
[2025-10-13 11:21:24] 2025-10-13 09:20:16,589 | INFO     | sum of square deviations: 2194675568.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,590 | INFO     | sum of deviations: 52563043182.50001
[2025-10-13 11:21:24] 2025-10-13 09:20:16,590 | INFO     | mean x: 1760340952.5
[2025-10-13 11:21:24] 2025-10-13 09:20:16,591 | INFO     | mean y: 2457935.5572916665
[2025-10-13 11:21:24] 2025-10-13 09:20:16,591 | INFO     | -- intersect: -42158159720.79268
[2025-10-13 11:21:24] 2025-10-13 09:20:16,591 | INFO     | intersect: -42158159720.79268
[2025-10-13 11:21:24] 2025-10-13 09:20:16,591 | INFO     | chi2: 5.478445550463765
[2025-10-13 11:21:24] 2025-10-13 09:20:16,591 | INFO     | current chi2=5.478445550463765 (change=11.344076087064009 %)
[2025-10-13 11:21:24] 2025-10-13 09:20:16,591 | INFO     | right removable region: 191
[2025-10-13 11:21:24] 2025-10-13 09:20:16,592 | INFO     | sum of square deviations: 2194675568.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,593 | INFO     | sum of deviations: -26459042464.5
[2025-10-13 11:21:24] 2025-10-13 09:20:16,593 | INFO     | mean x: 1760341257.5
[2025-10-13 11:21:24] 2025-10-13 09:20:16,593 | INFO     | mean y: 2506041.8385416665
[2025-10-13 11:21:24] 2025-10-13 09:20:16,593 | INFO     | -- intersect: 21225207366.503685
[2025-10-13 11:21:24] 2025-10-13 09:20:16,593 | INFO     | intersect: 21225207366.503685
[2025-10-13 11:21:24] 2025-10-13 09:20:16,594 | INFO     | chi2: 1.519128776624524
[2025-10-13 11:21:24] 2025-10-13 09:20:16,594 | INFO     | current chi2=1.519128776624524 (change=75.41642716099017 %)
[2025-10-13 11:21:24] 2025-10-13 09:20:16,594 | INFO     | sum of square deviations: 2027639878.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,595 | INFO     | sum of deviations: -43128825913.00001
[2025-10-13 11:21:24] 2025-10-13 09:20:16,596 | INFO     | mean x: 1760341410.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,596 | INFO     | mean y: 2521044.7379679144
[2025-10-13 11:21:24] 2025-10-13 09:20:16,596 | INFO     | -- intersect: 37445786509.71861
[2025-10-13 11:21:24] 2025-10-13 09:20:16,596 | INFO     | intersect: 37445786509.71861
[2025-10-13 11:21:24] 2025-10-13 09:20:16,596 | INFO     | chi2: 0.9514646951569494
[2025-10-13 11:21:24] 2025-10-13 09:20:16,596 | INFO     | current chi2=0.9514646951569494 (change=37.36773933865658 %)
[2025-10-13 11:21:24] 2025-10-13 09:20:16,597 | INFO     | sum of square deviations: 1869302025.5
[2025-10-13 11:21:24] 2025-10-13 09:20:16,598 | INFO     | sum of deviations: -37376688173.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,598 | INFO     | mean x: 1760341562.5
[2025-10-13 11:21:24] 2025-10-13 09:20:16,598 | INFO     | mean y: 2515498.923076923
[2025-10-13 11:21:24] 2025-10-13 09:20:16,598 | INFO     | -- intersect: 35200539553.88289
[2025-10-13 11:21:24] 2025-10-13 09:20:16,598 | INFO     | intersect: 35200539553.88289
[2025-10-13 11:21:24] 2025-10-13 09:20:16,599 | INFO     | chi2: 0.9430465917239705
[2025-10-13 11:21:24] 2025-10-13 09:20:16,599 | INFO     | current chi2=0.9430465917239705 (change=0.8847520539467071 %)
[2025-10-13 11:21:24] 2025-10-13 09:20:16,599 | INFO     | left removable region: 30
[2025-10-13 11:21:24] 2025-10-13 09:20:16,599 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,600 | INFO     | sum of deviations: -5412208651.999999
[2025-10-13 11:21:24] 2025-10-13 09:20:16,600 | INFO     | mean x: 1760341837.0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,601 | INFO     | mean y: 2506415.198757764
[2025-10-13 11:21:24] 2025-10-13 09:20:16,601 | INFO     | -- intersect: 7365124016.380874
[2025-10-13 11:21:24] 2025-10-13 09:20:16,601 | INFO     | intersect: 7365124016.380874
[2025-10-13 11:21:24] 2025-10-13 09:20:16,601 | INFO     | chi2: 0.06688815790922371
[2025-10-13 11:21:24] 2025-10-13 09:20:16,601 | INFO     | -- intersect: 7365124016.380874
[2025-10-13 11:21:24] 2025-10-13 09:20:16,601 | INFO     | current memory leak: -4.18 B/s (using 161 data points, chi2=0.07)
[2025-10-13 11:21:24] 2025-10-13 09:20:16,602 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2025-10-13 11:21:24] 2025-10-13 09:20:16,602 | INFO     | ..............................
[2025-10-13 11:21:24] 2025-10-13 09:20:16,602 | INFO     | . Timing measurements:
[2025-10-13 11:21:24] 2025-10-13 09:20:16,602 | INFO     | . get job = 0 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,603 | INFO     | . initial setup = 4 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,603 | INFO     | . payload setup = 123 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,603 | INFO     | . stage-in = 0 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,603 | INFO     | . payload execution = 12151 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,603 | INFO     | . stage-out = 4 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,603 | INFO     | . log creation = 1 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,603 | INFO     | ..............................
[2025-10-13 11:21:24] 2025-10-13 09:20:16,717 | INFO     | 
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | job summary report
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | --------------------------------------------------
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | PanDA job id: 6829691843
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | task id: 46376905
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | errors: (none)
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | pilot state: finished 
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | transexitcode: 0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,718 | INFO     | exeerrorcode: 0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | exeerrordiag: 
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | exitcode: 0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | exitmsg: OK
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | cpuconsumptiontime: 45459 s
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | nevents: 400
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | neventsw: 0
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | pid: 23429
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | pgrp: 23429
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | corecount: 8
[2025-10-13 11:21:24] 2025-10-13 09:20:16,719 | INFO     | event service: False
[2025-10-13 11:21:24] 2025-10-13 09:20:16,720 | INFO     | sizes: {0: 2348646, 1: 2348845, 2: 2348845, 12: 2348873, 23: 2348901, 34: 2348929, 44: 2349085, 55: 2349113, 66: 2349141, 77: 2349169, 87: 2349225, 91: 2349795, 98
[2025-10-13 11:21:24] 2025-10-13 09:20:16,720 | INFO     | --------------------------------------------------
[2025-10-13 11:21:24] 2025-10-13 09:20:16,720 | INFO     | 
[2025-10-13 11:21:24] 2025-10-13 09:20:16,720 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-13 11:21:24] 2025-10-13 09:20:17,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:21:24] 2025-10-13 09:20:17,317 | INFO     | job 6829691843 has completed (purged errors)
[2025-10-13 11:21:24] 2025-10-13 09:20:17,318 | INFO     | overall cleanup function is called
[2025-10-13 11:21:24] 2025-10-13 09:20:18,327 | INFO     | --- collectZombieJob: --- 10, [23429]
[2025-10-13 11:21:24] 2025-10-13 09:20:18,327 | INFO     | zombie collector waiting for pid 23429
[2025-10-13 11:21:24] 2025-10-13 09:20:18,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:21:24] 2025-10-13 09:20:18,327 | INFO     | collected zombie processes
[2025-10-13 11:21:24] 2025-10-13 09:20:18,327 | INFO     | will attempt to kill all subprocesses of pid=23429
[2025-10-13 11:21:24] 2025-10-13 09:20:18,457 | INFO     | process IDs to be killed: [23429] (in reverse order)
[2025-10-13 11:21:24] 2025-10-13 09:20:18,857 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:21:24] 2025-10-13 09:20:18,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:21:24] 2025-10-13 09:20:18,861 | INFO     | did not find any defunct processes belonging to 23429
[2025-10-13 11:21:24] 2025-10-13 09:20:18,864 | INFO     | did not find any defunct processes belonging to 23429
[2025-10-13 11:21:24] 2025-10-13 09:20:18,864 | INFO     | ready for new job
[2025-10-13 11:21:24] 2025-10-13 09:20:18,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:21:24] 2025-10-13 09:20:18,866 | INFO     | ***************************************
[2025-10-13 11:21:24] 2025-10-13 09:20:18,866 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 11:21:24] 2025-10-13 09:20:18,866 | INFO     | ***************************************
[2025-10-13 11:21:24] 2025-10-13 09:20:18,867 | INFO     | 
[2025-10-13 11:21:24] 2025-10-13 09:20:18,867 | INFO     | pilot is running in a VM
[2025-10-13 11:21:24] 2025-10-13 09:20:18,867 | INFO     | architecture information:
[2025-10-13 11:21:24] 2025-10-13 09:20:18,879 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:21:24] 2025-10-13 09:20:19,054 | INFO     | cat /etc/os-release:
[2025-10-13 11:21:24] NAME="CentOS Linux"
[2025-10-13 11:21:24] VERSION="7 (Core)"
[2025-10-13 11:21:24] ID="centos"
[2025-10-13 11:21:24] ID_LIKE="rhel fedora"
[2025-10-13 11:21:24] VERSION_ID="7"
[2025-10-13 11:21:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:21:24] ANSI_COLOR="0;31"
[2025-10-13 11:21:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:21:24] HOME_URL="https://www.centos.org/"
[2025-10-13 11:21:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:21:24] 
[2025-10-13 11:21:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:21:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:21:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:21:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:21:24] 
[2025-10-13 11:21:24] 2025-10-13 09:20:19,054 | INFO     | ***************************************
[2025-10-13 11:21:24] 2025-10-13 09:20:19,558 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-13 11:21:24] 2025-10-13 09:20:19,651 | INFO     | sufficient remaining disk space (495315845120 B)
[2025-10-13 11:21:24] 2025-10-13 09:20:19,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:21:24] 2025-10-13 09:20:19,652 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:21:24] 2025-10-13 09:20:19,652 | INFO     | update_server=False
[2025-10-13 11:21:24] 2025-10-13 09:20:19,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:21:24] 2025-10-13 09:20:19,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:21:24] 2025-10-13 09:20:19,823 | INFO     | all data control threads have been joined
[2025-10-13 11:21:24] 2025-10-13 09:20:19,878 | INFO     | all job control threads have been joined
[2025-10-13 11:21:24] 2025-10-13 09:20:20,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:21:24] 2025-10-13 09:20:20,173 | INFO     | aborting loop
[2025-10-13 11:21:24] 2025-10-13 09:20:20,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:21:24] 2025-10-13 09:20:20,658 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:20,673 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:20,786 | INFO     | all payload control threads have been joined
[2025-10-13 11:21:24] 2025-10-13 09:20:20,829 | INFO     | [data] control thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:20,884 | INFO     | [job] control thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:20,960 | INFO     | [job] validate thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,088 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,179 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,217 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,428 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,660 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:21:24] 2025-10-13 09:20:21,734 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,792 | INFO     | [payload] control thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:21,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:22,737 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:24,478 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:21:24] 2025-10-13 09:20:46,357 [wrapper] supervise_pilot (15 min periods counter: 15)
[2025-10-13 11:21:24] 2025-10-13 09:20:49,067 | INFO     | PID=16876 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:21:24] 2025-10-13 09:20:49,067 | INFO     | .. there are 9 such processes running
[2025-10-13 11:21:24] 2025-10-13 09:20:49,068 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:21:24] 2025-10-13 09:20:49,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:21:24] 2025-10-13 09:20:49,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:21:24] 2025-10-13 09:21:14,452 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:21:24] 2025-10-13 09:21:14,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488894986048)>', '<ExcThread(monitor, started 140488246032128)>']
[2025-10-13 11:21:24] 2025-10-13 09:21:15,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:21:24] 2025-10-13 09:21:15,220 | INFO     | [monitor] control thread has ended
[2025-10-13 11:21:24] 2025-10-13 09:21:19,479 | INFO     | all workflow threads have been joined
[2025-10-13 11:21:24] 2025-10-13 09:21:19,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:21:24] 2025-10-13 09:21:19,479 | INFO     | traces error code: 0
[2025-10-13 11:21:24] 2025-10-13 09:21:19,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:21:24] 2025-10-13 09:21:19,904 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:21:24] 2025-10-13 09:21:20,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:21:24] 2025-10-13 09:21:20,116 [wrapper] pilotpid: 16876
[2025-10-13 11:21:24] 2025-10-13 09:21:20,239 [wrapper] Pilot exit status: 0
[2025-10-13 11:21:24] 2025-10-13 09:21:20,704 [wrapper] pandaids: 6829691843
[2025-10-13 11:21:24] 2025-10-13 09:21:21,627 [wrapper] cleanup supervisor_pilot 17123 16877
[2025-10-13 11:21:24] 2025-10-13 09:21:21,720 [wrapper] Test setup, not cleaning
[2025-10-13 11:21:24] 2025-10-13 09:21:21,842 [wrapper] apfmon messages muted
[2025-10-13 11:21:24] 2025-10-13 09:21:21,962 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:21:24] 2025-10-13 09:21:22,062 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:21:24]  *** Error codes and diagnostics ***
[2025-10-13 11:21:24]     "exeErrorCode": 0,
[2025-10-13 11:21:24]     "exeErrorDiag": "",
[2025-10-13 11:21:24]     "pilotErrorCode": 0,
[2025-10-13 11:21:24]     "pilotErrorDiag": "",
[2025-10-13 11:21:24]  *** Listing of results directory ***
[2025-10-13 11:21:24] total 391740
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc    552446 Oct  4 16:43 pilot3.tar.gz
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc      5112 Oct  4 16:43 queuedata.json
[2025-10-13 11:21:24] -rwx------. 1 boinc boinc     36292 Oct  4 16:44 runpilot2-wrapper.sh
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc       100 Oct 13 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:21:24] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 07:46 run_atlas
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc       105 Oct 13 07:46 job.xml
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc      6391 Oct 13 07:46 init_data.xml
[2025-10-13 11:21:24] -rw-r--r--. 2 boinc boinc 212288335 Oct 13 07:46 EVNT.46376901._002227.pool.root.1
[2025-10-13 11:21:24] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:46 start_atlas.sh
[2025-10-13 11:21:24] drwxrwx--x. 2 boinc boinc        68 Oct 13 07:46 shared
[2025-10-13 11:21:24] -rw-r--r--. 2 boinc boinc    565605 Oct 13 07:46 input.tar.gz
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc         0 Oct 13 07:46 boinc_lockfile
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc      2519 Oct 13 07:47 pandaJob.out
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc    973230 Oct 13 07:50 agis_schedconf.cvmfs.json
[2025-10-13 11:21:24] drwx------. 4 boinc boinc      4096 Oct 13 07:50 pilot3
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc 180759321 Oct 13 11:17 HITS.46376905._061721.pool.root.1
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc       531 Oct 13 11:17 boinc_task_state.xml
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc      1017 Oct 13 11:18 memory_monitor_summary.json
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc   1560580 Oct 13 11:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc    431259 Oct 13 11:18 log.46376905._061721.job.log.tgz.1
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc      7781 Oct 13 11:20 heartbeat.json
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc        95 Oct 13 11:20 pilot_heartbeat.json
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc      8192 Oct 13 11:21 boinc_mmap_file
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc        28 Oct 13 11:21 wrapper_checkpoint.txt
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc      4885 Oct 13 11:21 pilotlog.txt
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc   1677368 Oct 13 11:21 log.46376905._061721.job.log.1
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc       357 Oct 13 11:21 output.list
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc       620 Oct 13 11:21 runtime_log
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc   2129920 Oct 13 11:21 result.tar.gz
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc       656 Oct 13 11:21 rYZNDmOgIP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmukDMDmZaxlQo.diag
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc      8717 Oct 13 11:21 runtime_log.err
[2025-10-13 11:21:24] -rw-r--r--. 1 boinc boinc     20609 Oct 13 11:21 stderr.txt
[2025-10-13 11:21:24] HITS file was successfully produced:
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc 180759321 Oct 13 11:17 shared/HITS.pool.root.1
[2025-10-13 11:21:24]  *** Contents of shared directory: ***
[2025-10-13 11:21:24] total 386492
[2025-10-13 11:21:24] -rw-r--r--. 2 boinc boinc 212288335 Oct 13 07:46 ATLAS.root_0
[2025-10-13 11:21:24] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:46 start_atlas.sh
[2025-10-13 11:21:24] -rw-r--r--. 2 boinc boinc    565605 Oct 13 07:46 input.tar.gz
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc 180759321 Oct 13 11:17 HITS.pool.root.1
[2025-10-13 11:21:24] -rw-------. 1 boinc boinc   2129920 Oct 13 11:21 result.tar.gz
11:21:25 (13080): run_atlas exited; CPU time 45622.744290
11:21:25 (13080): called boinc_finish(0)

</stderr_txt>
]]>

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