Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:54:31 (25890): wrapper (7.7.26015): starting
15:54:31 (25890): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:54:31] Arguments: --nthreads 8
[2025-10-12 15:54:31] Threads: 8
[2025-10-12 15:54:31] Checking for CVMFS
[2025-10-12 15:54:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:54:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:54:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:54:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:54:32] 2.11.2.0 27570 83791 79776 151635 3 57 13531273 20275200 1 130560 0 37468165 99.987 2794446 35580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:54:32] CVMFS is ok
[2025-10-12 15:54:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:54:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:54:32] Further information can be found at the LHC@home message board.
[2025-10-12 15:54:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:54:32] Checking for apptainer binary...
[2025-10-12 15:54:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:54:32] Running /usr/bin/apptainer --version
[2025-10-12 15:54:32] apptainer version 1.3.2-1.el7
[2025-10-12 15:54:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:54:34] c-204-23.aglt2.org
[2025-10-12 15:54:34] apptainer works
[2025-10-12 15:54:34] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:54:34] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:54:34] Starting ATLAS job with PandaID=6839590695
[2025-10-12 15:54:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:57:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:57:09] 2025-10-12 21:56:31,406 | INFO     | time since job start (7300s) is within the limit (172800.0s)
[2025-10-12 17:57:09] 2025-10-12 21:56:32,198 | INFO     | monitor loop #542: job 0:6839590695 is in state 'finished'
[2025-10-12 17:57:09] 2025-10-12 21:56:32,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:57:09] 2025-10-12 21:56:32,526 | INFO     | PID=29593 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:57:09] 2025-10-12 21:56:33,100 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:57:09] 2025-10-12 21:56:33,103 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,105 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839590695/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,105 | INFO     | extracted standard info from prmon json
[2025-10-12 17:57:09] 2025-10-12 21:56:33,105 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:57:09] 2025-10-12 21:56:33,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:57:09] 2025-10-12 21:56:33,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:57:09] 2025-10-12 21:56:33,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:57:09] 2025-10-12 21:56:33,109 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:57:09] 2025-10-12 21:56:33,109 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,110 | INFO     | sum of deviations: 9724302251.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,110 | INFO     | mean x: 1760302522.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,110 | INFO     | mean y: 2487415.12605042
[2025-10-12 17:57:09] 2025-10-12 21:56:33,110 | INFO     | -- intersect: -32758510462.599426
[2025-10-12 17:57:09] 2025-10-12 21:56:33,110 | INFO     | intersect: -32758510462.599426
[2025-10-12 17:57:09] 2025-10-12 21:56:33,110 | INFO     | chi2: 1.598195685159727
[2025-10-12 17:57:09] 2025-10-12 21:56:33,111 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 17:57:09] 2025-10-12 21:56:33,111 | INFO     | sum of deviations: 9282451373.999994
[2025-10-12 17:57:09] 2025-10-12 21:56:33,111 | INFO     | mean x: 1760302369.5
[2025-10-12 17:57:09] 2025-10-12 21:56:33,112 | INFO     | mean y: 2486347.245614035
[2025-10-12 17:57:09] 2025-10-12 21:56:33,112 | INFO     | -- intersect: -35568048654.4592
[2025-10-12 17:57:09] 2025-10-12 21:56:33,112 | INFO     | intersect: -35568048654.4592
[2025-10-12 17:57:09] 2025-10-12 21:56:33,112 | INFO     | chi2: 1.6011062265511604
[2025-10-12 17:57:09] 2025-10-12 21:56:33,112 | INFO     | current chi2=1.6011062265511604 (change=-0.18211420656804891 %)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,112 | INFO     | right removable region: 113
[2025-10-12 17:57:09] 2025-10-12 21:56:33,113 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 17:57:09] 2025-10-12 21:56:33,113 | INFO     | sum of deviations: -8456400903.000001
[2025-10-12 17:57:09] 2025-10-12 21:56:33,113 | INFO     | mean x: 1760302674.5
[2025-10-12 17:57:09] 2025-10-12 21:56:33,113 | INFO     | mean y: 2530513.6666666665
[2025-10-12 17:57:09] 2025-10-12 21:56:33,114 | INFO     | -- intersect: 32407629587.9518
[2025-10-12 17:57:09] 2025-10-12 21:56:33,114 | INFO     | intersect: 32407629587.9518
[2025-10-12 17:57:09] 2025-10-12 21:56:33,114 | INFO     | chi2: 0.0936570949775051
[2025-10-12 17:57:09] 2025-10-12 21:56:33,114 | INFO     | current chi2=0.0936570949775051 (change=94.1398230612702 %)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,114 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,115 | INFO     | sum of deviations: -6147290372.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,115 | INFO     | mean x: 1760302827.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,115 | INFO     | mean y: 2524311.633027523
[2025-10-12 17:57:09] 2025-10-12 21:56:33,115 | INFO     | -- intersect: 26951964720.72278
[2025-10-12 17:57:09] 2025-10-12 21:56:33,115 | INFO     | intersect: 26951964720.72278
[2025-10-12 17:57:09] 2025-10-12 21:56:33,116 | INFO     | chi2: 0.0782103665940561
[2025-10-12 17:57:09] 2025-10-12 21:56:33,116 | INFO     | current chi2=0.0782103665940561 (change=16.49285447851981 %)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,116 | INFO     | left removable region: 20
[2025-10-12 17:57:09] 2025-10-12 21:56:33,116 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,117 | INFO     | sum of deviations: 1035062396.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,117 | INFO     | mean x: 1760302949.0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,117 | INFO     | mean y: 2501556.64516129
[2025-10-12 17:57:09] 2025-10-12 21:56:33,117 | INFO     | -- intersect: -7303451778.503407
[2025-10-12 17:57:09] 2025-10-12 21:56:33,117 | INFO     | intersect: -7303451778.503407
[2025-10-12 17:57:09] 2025-10-12 21:56:33,117 | INFO     | chi2: 7.719948052980279e-05
[2025-10-12 17:57:09] 2025-10-12 21:56:33,117 | INFO     | -- intersect: -7303451778.503407
[2025-10-12 17:57:09] 2025-10-12 21:56:33,118 | INFO     | current memory leak: 4.15 B/s (using 93 data points, chi2=0.00)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,118 | INFO     | could have reported an average CPU frequency of 1959 MHz (7 samples)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,118 | INFO     | ..............................
[2025-10-12 17:57:09] 2025-10-12 21:56:33,118 | INFO     | . Timing measurements:
[2025-10-12 17:57:09] 2025-10-12 21:56:33,118 | INFO     | . get job = 0 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,118 | INFO     | . initial setup = 2 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,119 | INFO     | . payload setup = 8 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,119 | INFO     | . stage-in = 0 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,119 | INFO     | . payload execution = 7261 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,119 | INFO     | . stage-out = 0 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,119 | INFO     | . log creation = 0 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,119 | INFO     | ..............................
[2025-10-12 17:57:09] 2025-10-12 21:56:33,212 | INFO     | 
[2025-10-12 17:57:09] 2025-10-12 21:56:33,212 | INFO     | job summary report
[2025-10-12 17:57:09] 2025-10-12 21:56:33,213 | INFO     | --------------------------------------------------
[2025-10-12 17:57:09] 2025-10-12 21:56:33,213 | INFO     | PanDA job id: 6839590695
[2025-10-12 17:57:09] 2025-10-12 21:56:33,213 | INFO     | task id: 46676269
[2025-10-12 17:57:09] 2025-10-12 21:56:33,213 | INFO     | errors: (none)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:57:09] 2025-10-12 21:56:33,213 | INFO     | pilot state: finished 
[2025-10-12 17:57:09] 2025-10-12 21:56:33,214 | INFO     | transexitcode: 0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,214 | INFO     | exeerrorcode: 0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,214 | INFO     | exeerrordiag: 
[2025-10-12 17:57:09] 2025-10-12 21:56:33,214 | INFO     | exitcode: 0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,214 | INFO     | exitmsg: OK
[2025-10-12 17:57:09] 2025-10-12 21:56:33,214 | INFO     | cpuconsumptiontime: 54068 s
[2025-10-12 17:57:09] 2025-10-12 21:56:33,215 | INFO     | nevents: 400
[2025-10-12 17:57:09] 2025-10-12 21:56:33,215 | INFO     | neventsw: 0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,215 | INFO     | pid: 3820
[2025-10-12 17:57:09] 2025-10-12 21:56:33,215 | INFO     | pgrp: 3820
[2025-10-12 17:57:09] 2025-10-12 21:56:33,215 | INFO     | corecount: 8
[2025-10-12 17:57:09] 2025-10-12 21:56:33,216 | INFO     | event service: False
[2025-10-12 17:57:09] 2025-10-12 21:56:33,216 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 7273: 2376485, 7274: 2376484, 7275: 2385666, 7279: 2385722, 7284: 2385916}
[2025-10-12 17:57:09] 2025-10-12 21:56:33,216 | INFO     | --------------------------------------------------
[2025-10-12 17:57:09] 2025-10-12 21:56:33,216 | INFO     | 
[2025-10-12 17:57:09] 2025-10-12 21:56:33,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:57:09] 2025-10-12 21:56:33,244 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:57:09] 2025-10-12 21:56:33,248 | INFO     | job 6839590695 has completed (purged errors)
[2025-10-12 17:57:09] 2025-10-12 21:56:33,249 | INFO     | overall cleanup function is called
[2025-10-12 17:57:09] 2025-10-12 21:56:34,257 | INFO     | --- collectZombieJob: --- 10, [3820]
[2025-10-12 17:57:09] 2025-10-12 21:56:34,258 | INFO     | zombie collector waiting for pid 3820
[2025-10-12 17:57:09] 2025-10-12 21:56:34,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:57:09] 2025-10-12 21:56:34,267 | INFO     | collected zombie processes
[2025-10-12 17:57:09] 2025-10-12 21:56:34,267 | INFO     | will attempt to kill all subprocesses of pid=3820
[2025-10-12 17:57:09] 2025-10-12 21:56:34,363 | INFO     | process IDs to be killed: [3820] (in reverse order)
[2025-10-12 17:57:09] 2025-10-12 21:56:34,423 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:57:09] 2025-10-12 21:56:34,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:57:09] 2025-10-12 21:56:34,428 | INFO     | did not find any defunct processes belonging to 3820
[2025-10-12 17:57:09] 2025-10-12 21:56:34,432 | INFO     | did not find any defunct processes belonging to 3820
[2025-10-12 17:57:09] 2025-10-12 21:56:34,432 | INFO     | ready for new job
[2025-10-12 17:57:09] 2025-10-12 21:56:34,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:57:09] 2025-10-12 21:56:34,434 | INFO     | ***************************************
[2025-10-12 17:57:09] 2025-10-12 21:56:34,434 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:57:09] 2025-10-12 21:56:34,434 | INFO     | ***************************************
[2025-10-12 17:57:09] 2025-10-12 21:56:34,434 | INFO     | 
[2025-10-12 17:57:09] 2025-10-12 21:56:34,435 | INFO     | architecture information:
[2025-10-12 17:57:09] 2025-10-12 21:56:34,435 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:57:09] 2025-10-12 21:56:34,454 | INFO     | cat /etc/os-release:
[2025-10-12 17:57:09] NAME="CentOS Linux"
[2025-10-12 17:57:09] VERSION="7 (Core)"
[2025-10-12 17:57:09] ID="centos"
[2025-10-12 17:57:09] ID_LIKE="rhel fedora"
[2025-10-12 17:57:09] VERSION_ID="7"
[2025-10-12 17:57:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:57:09] ANSI_COLOR="0;31"
[2025-10-12 17:57:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:57:09] HOME_URL="https://www.centos.org/"
[2025-10-12 17:57:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:57:09] 
[2025-10-12 17:57:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:57:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:57:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:57:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:57:09] 
[2025-10-12 17:57:09] 2025-10-12 21:56:34,455 | INFO     | ***************************************
[2025-10-12 17:57:09] 2025-10-12 21:56:34,958 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:57:09] 2025-10-12 21:56:34,979 | INFO     | sufficient remaining disk space (18561892352 B)
[2025-10-12 17:57:09] 2025-10-12 21:56:34,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:57:09] 2025-10-12 21:56:34,980 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:57:09] 2025-10-12 21:56:34,980 | INFO     | update_server=False
[2025-10-12 17:57:09] 2025-10-12 21:56:34,980 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:57:09] 2025-10-12 21:56:34,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:57:09] 2025-10-12 21:56:34,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:57:09] 2025-10-12 21:56:35,665 | INFO     | all data control threads have been joined
[2025-10-12 17:57:09] 2025-10-12 21:56:35,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:57:09] 2025-10-12 21:56:35,713 | INFO     | aborting loop
[2025-10-12 17:57:09] 2025-10-12 21:56:35,888 | INFO     | all payload control threads have been joined
[2025-10-12 17:57:09] 2025-10-12 21:56:35,985 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:35,987 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,176 | INFO     | all job control threads have been joined
[2025-10-12 17:57:09] 2025-10-12 21:56:36,273 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,667 | INFO     | [data] control thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,718 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,850 | INFO     | [job] validate thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,884 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,894 | INFO     | [payload] control thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,940 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,960 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:36,987 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:37,022 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:37,118 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:37,181 | INFO     | [job] control thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:56:37,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:57:09] 2025-10-12 21:56:41,943 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:57:09] 2025-10-12 21:57:03,208 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:57:09] 2025-10-12 21:57:04,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850596210496)>', '<ExcThread(monitor, started 139849990379264)>']
[2025-10-12 17:57:09] 2025-10-12 21:57:04,728 | INFO     | PID=29593 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:57:09] 2025-10-12 21:57:04,729 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:57:09] 2025-10-12 21:57:04,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:57:09] 2025-10-12 21:57:04,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:57:09] 2025-10-12 21:57:04,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:57:09] 2025-10-12 21:57:04,730 | INFO     | [monitor] control thread has ended
[2025-10-12 17:57:09] 2025-10-12 21:57:09,355 | INFO     | all workflow threads have been joined
[2025-10-12 17:57:09] 2025-10-12 21:57:09,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:57:09] 2025-10-12 21:57:09,355 | INFO     | traces error code: 0
[2025-10-12 17:57:09] 2025-10-12 21:57:09,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:57:09] 2025-10-12 21:57:09,486 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:57:09] 2025-10-12 21:57:09,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:57:09] 2025-10-12 21:57:09,495 [wrapper] pilotpid: 29593
[2025-10-12 17:57:09] 2025-10-12 21:57:09,499 [wrapper] Pilot exit status: 0
[2025-10-12 17:57:09] 2025-10-12 21:57:09,518 [wrapper] pandaids: 6839590695
[2025-10-12 17:57:09] 2025-10-12 21:57:09,563 [wrapper] cleanup supervisor_pilot 30514 29594
[2025-10-12 17:57:09] 2025-10-12 21:57:09,568 [wrapper] Test setup, not cleaning
[2025-10-12 17:57:09] 2025-10-12 21:57:09,573 [wrapper] apfmon messages muted
[2025-10-12 17:57:09] 2025-10-12 21:57:09,578 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:57:09] 2025-10-12 21:57:09,582 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:57:09]  *** Error codes and diagnostics ***
[2025-10-12 17:57:09]     "exeErrorCode": 0,
[2025-10-12 17:57:09]     "exeErrorDiag": "",
[2025-10-12 17:57:09]     "pilotErrorCode": 0,
[2025-10-12 17:57:09]     "pilotErrorDiag": "",
[2025-10-12 17:57:09]  *** Listing of results directory ***
[2025-10-12 17:57:09] total 408308
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 17:57:09] -rwx------ 1 boincer umatlas     36292 Oct 12 02:16 runpilot2-wrapper.sh
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:16 queuedata.json
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:57:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:54 run_atlas
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:54 job.xml
[2025-10-12 17:57:09] -rw-r--r-- 2 boincer umatlas 219626868 Oct 12 15:54 EVNT.46676267._004333.pool.root.1
[2025-10-12 17:57:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:54 start_atlas.sh
[2025-10-12 17:57:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:54 shared
[2025-10-12 17:57:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 15:54 input.tar.gz
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:54 boinc_lockfile
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:54 pandaJob.out
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas    975536 Oct 12 15:54 agis_schedconf.cvmfs.json
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas   1560580 Oct 12 15:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:57:09] drwx------ 5 boincer umatlas      4096 Oct 12 15:54 pilot3
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 17:46 init_data.xml
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas 191776711 Oct 12 17:55 HITS.46676269._072264.pool.root.1
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:56 boinc_task_state.xml
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas      1050 Oct 12 17:56 memory_monitor_summary.json
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas    375435 Oct 12 17:56 log.46676269._072264.job.log.tgz.1
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas      7845 Oct 12 17:56 heartbeat.json
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:56 boinc_mmap_file
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:56 wrapper_checkpoint.txt
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas        95 Oct 12 17:57 pilot_heartbeat.json
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas      4746 Oct 12 17:57 pilotlog.txt
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas   1025607 Oct 12 17:57 log.46676269._072264.job.log.1
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas       357 Oct 12 17:57 output.list
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:57 runtime_log
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas   1423360 Oct 12 17:57 result.tar.gz
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas       659 Oct 12 17:57 UdELDm5Y4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwniNDmsu7q6m.diag
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 17:57 runtime_log.err
[2025-10-12 17:57:09] -rw-r--r-- 1 boincer umatlas     21197 Oct 12 17:57 stderr.txt
[2025-10-12 17:57:09] HITS file was successfully produced:
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas 191776711 Oct 12 17:55 shared/HITS.pool.root.1
[2025-10-12 17:57:09]  *** Contents of shared directory: ***
[2025-10-12 17:57:09] total 403732
[2025-10-12 17:57:09] -rw-r--r-- 2 boincer umatlas 219626868 Oct 12 15:54 ATLAS.root_0
[2025-10-12 17:57:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:54 start_atlas.sh
[2025-10-12 17:57:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 15:54 input.tar.gz
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas 191776711 Oct 12 17:55 HITS.pool.root.1
[2025-10-12 17:57:09] -rw------- 1 boincer umatlas   1423360 Oct 12 17:57 result.tar.gz
17:57:10 (25890): run_atlas exited; CPU time 54025.733443
17:57:10 (25890): called boinc_finish(0)

</stderr_txt>
]]>

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