Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:17:56 (2463037): wrapper (7.7.26015): starting
07:17:56 (2463037): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 07:17:56] Arguments: --nthreads 2
[2025-10-13 07:17:56] Threads: 2
[2025-10-13 07:17:56] Checking for CVMFS
[2025-10-13 07:17:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:17:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:17:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:17:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:17:56] 2.9.2.0 1187580 5386 61152 151650 1 56 26990101 36864000 0 130560 0 3358083 99.989 184597 833 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 07:17:56] CVMFS is ok
[2025-10-13 07:17:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:17:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:17:56] Further information can be found at the LHC@home message board.
[2025-10-13 07:17:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:17:56] Checking for apptainer binary...
[2025-10-13 07:17:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:17:56] Running /usr/bin/apptainer --version
[2025-10-13 07:17:56] apptainer version 1.4.1-1.1
[2025-10-13 07:17:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:17:56] thA314b
[2025-10-13 07:17:56] apptainer works
[2025-10-13 07:17:56] Set ATHENA_PROC_NUMBER=2
[2025-10-13 07:17:56] Set ATHENA_CORE_NUMBER=2
[2025-10-13 07:17:56] Starting ATLAS job with PandaID=6840390888
[2025-10-13 07:17:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:23:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:23:26] 2025-10-13 07:22:38,969 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:23:26] 2025-10-13 07:22:38,969 | INFO     | update_server=False
[2025-10-13 09:23:26] 2025-10-13 07:22:38,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:23:26] 2025-10-13 07:22:38,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:23:26] 2025-10-13 07:22:39,283 | INFO     | all payload control threads have been joined
[2025-10-13 09:23:26] 2025-10-13 07:22:39,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:23:26] 2025-10-13 07:22:39,291 | INFO     | aborting loop
[2025-10-13 09:23:26] 2025-10-13 07:22:39,571 | INFO     | all data control threads have been joined
[2025-10-13 09:23:26] 2025-10-13 07:22:39,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:23:26] 2025-10-13 07:22:39,975 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:39,976 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,028 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,214 | INFO     | all job control threads have been joined
[2025-10-13 09:23:26] 2025-10-13 07:22:40,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:23:26] 2025-10-13 07:22:40,289 | INFO     | [payload] control thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,296 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,424 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,577 | INFO     | [data] control thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,663 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,663 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,770 | INFO     | [job] validate thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:40,963 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:41,220 | INFO     | [job] control thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:41,331 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:42,221 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:43,965 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:22:49,576 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:23:26] 2025-10-13 07:22:50,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:23:26] 2025-10-13 07:23:09,426 | INFO     | PID=2466739 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:23:26] 2025-10-13 07:23:09,639 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:23:26] 2025-10-13 07:23:09,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:23:26] 2025-10-13 07:23:09,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:23:26] 2025-10-13 07:23:20,532 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:23:26] 2025-10-13 07:23:21,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952514479936)>', '<ExcThread(monitor, started 139952021030656)>']
[2025-10-13 09:23:26] 2025-10-13 07:23:21,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:23:26] 2025-10-13 07:23:21,705 | INFO     | [monitor] control thread has ended
[2025-10-13 09:23:26] 2025-10-13 07:23:26,678 | INFO     | all workflow threads have been joined
[2025-10-13 09:23:26] 2025-10-13 07:23:26,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:23:26] 2025-10-13 07:23:26,679 | INFO     | traces error code: 0
[2025-10-13 09:23:26] 2025-10-13 07:23:26,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:23:26] 2025-10-13 07:23:26,720 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:23:26] 2025-10-13 07:23:26,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:23:26] 2025-10-13 07:23:26,725 [wrapper] pilotpid: 2466739
[2025-10-13 09:23:26] 2025-10-13 07:23:26,727 [wrapper] Pilot exit status: 0
[2025-10-13 09:23:26] 2025-10-13 07:23:26,733 [wrapper] pandaids: 6840390888
[2025-10-13 09:23:26] 2025-10-13 07:23:26,746 [wrapper] cleanup supervisor_pilot 2487611 2466740
[2025-10-13 09:23:26] 2025-10-13 07:23:26,748 [wrapper] Test setup, not cleaning
[2025-10-13 09:23:26] 2025-10-13 07:23:26,750 [wrapper] apfmon messages muted
[2025-10-13 09:23:26] 2025-10-13 07:23:26,752 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:23:26] 2025-10-13 07:23:26,754 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:23:26]  *** Error codes and diagnostics ***
[2025-10-13 09:23:26]     "exeErrorCode": 0,
[2025-10-13 09:23:26]     "exeErrorDiag": "",
[2025-10-13 09:23:26]     "pilotErrorCode": 0,
[2025-10-13 09:23:26]     "pilotErrorDiag": "",
[2025-10-13 09:23:26]  *** Listing of results directory ***
[2025-10-13 09:23:26] total 414952
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:01 pilot3.tar.gz
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:32 queuedata.json
[2025-10-13 09:23:26] -rwx------ 1 boinc boinc     36292 Oct 12 18:33 runpilot2-wrapper.sh
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:23:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:17 run_atlas
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:17 job.xml
[2025-10-13 09:23:26] -rw-r--r-- 2 boinc boinc 220378003 Oct 13 07:17 EVNT.46676267._004749.pool.root.1
[2025-10-13 09:23:26] -rw-r--r-- 2 boinc boinc    569679 Oct 13 07:17 input.tar.gz
[2025-10-13 09:23:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:17 start_atlas.sh
[2025-10-13 09:23:26] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:17 shared
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:17 boinc_setup_complete
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc      6207 Oct 13 07:17 init_data.xml
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:17 boinc_lockfile
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc      2547 Oct 13 07:17 pandaJob.out
[2025-10-13 09:23:26] -rw------- 1 boinc boinc    973230 Oct 13 07:18 agis_schedconf.cvmfs.json
[2025-10-13 09:23:26] -rw------- 1 boinc boinc   1560580 Oct 13 07:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:23:26] drwx------ 5 boinc boinc      4096 Oct 13 07:18 pilot3
[2025-10-13 09:23:26] -rw------- 1 boinc boinc 197977192 Oct 13 09:22 HITS.46676269._083660.pool.root.1
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:22 boinc_task_state.xml
[2025-10-13 09:23:26] -rw------- 1 boinc boinc      1016 Oct 13 09:22 memory_monitor_summary.json
[2025-10-13 09:23:26] -rw------- 1 boinc boinc    260777 Oct 13 09:22 log.46676269._083660.job.log.tgz.1
[2025-10-13 09:23:26] -rw------- 1 boinc boinc      7749 Oct 13 09:22 heartbeat.json
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:23 boinc_mmap_file
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:23 wrapper_checkpoint.txt
[2025-10-13 09:23:26] -rw------- 1 boinc boinc        95 Oct 13 09:23 pilot_heartbeat.json
[2025-10-13 09:23:26] -rw------- 1 boinc boinc      4824 Oct 13 09:23 pilotlog.txt
[2025-10-13 09:23:26] -rw------- 1 boinc boinc   1076335 Oct 13 09:23 log.46676269._083660.job.log.1
[2025-10-13 09:23:26] -rw------- 1 boinc boinc       357 Oct 13 09:23 output.list
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:23 runtime_log
[2025-10-13 09:23:26] -rw------- 1 boinc boinc   1351680 Oct 13 09:23 result.tar.gz
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc      8782 Oct 13 09:23 runtime_log.err
[2025-10-13 09:23:26] -rw------- 1 boinc boinc       660 Oct 13 09:23 d1PMDmXBES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7ekNDm2MLXTm.diag
[2025-10-13 09:23:26] -rw-r--r-- 1 boinc boinc      7612 Oct 13 09:23 stderr.txt
[2025-10-13 09:23:26] HITS file was successfully produced:
[2025-10-13 09:23:26] -rw------- 1 boinc boinc 197977192 Oct 13 09:22 shared/HITS.pool.root.1
[2025-10-13 09:23:26]  *** Contents of shared directory: ***
[2025-10-13 09:23:26] total 410460
[2025-10-13 09:23:26] -rw-r--r-- 2 boinc boinc 220378003 Oct 13 07:17 ATLAS.root_0
[2025-10-13 09:23:26] -rw-r--r-- 2 boinc boinc    569679 Oct 13 07:17 input.tar.gz
[2025-10-13 09:23:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:17 start_atlas.sh
[2025-10-13 09:23:26] -rw------- 1 boinc boinc 197977192 Oct 13 09:22 HITS.pool.root.1
[2025-10-13 09:23:26] -rw------- 1 boinc boinc   1351680 Oct 13 09:23 result.tar.gz
09:23:28 (2463037): run_atlas exited; CPU time 14529.319801
09:23:28 (2463037): called boinc_finish(0)

</stderr_txt>
]]>

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