Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:24 (3267169): wrapper (7.7.26015): starting
00:01:24 (3267169): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:01:24] Arguments: --nthreads 9
[2025-10-13 00:01:24] Threads: 9
[2025-10-13 00:01:24] Checking for CVMFS
[2025-10-13 00:01:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:28] 2.13.2.0 1101976 130195 295892 151647 1 538 26065138 32935936 29210 16776704 0 173457750 99.813 80836268 29162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:28] CVMFS is ok
[2025-10-13 00:01:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:28] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:28] Checking for apptainer binary...
[2025-10-13 00:01:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:28] Running /usr/bin/apptainer --version
[2025-10-13 00:01:28] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:30] c-5-2.aglt2.org
[2025-10-13 00:01:30] apptainer works
[2025-10-13 00:01:30] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:01:30] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:01:30] Starting ATLAS job with PandaID=6840390890
[2025-10-13 00:01:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:08:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:08:51] 2025-10-13 13:07:51,325 | INFO     | chi2: 2.5497653474153688
[2025-10-13 09:08:51] 2025-10-13 13:07:51,325 | INFO     | current chi2=2.5497653474153688 (change=61.33930140470999 %)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,326 | INFO     | sum of square deviations: 43849099770.579735
[2025-10-13 09:08:51] 2025-10-13 13:07:51,332 | INFO     | sum of deviations: 29054626406.389633
[2025-10-13 09:08:51] 2025-10-13 13:07:51,332 | INFO     | mean x: 1760344958.4433782
[2025-10-13 09:08:51] 2025-10-13 13:07:51,333 | INFO     | mean y: 2445402.30134357
[2025-10-13 09:08:51] 2025-10-13 13:07:51,333 | INFO     | -- intersect: -1163967714.080581
[2025-10-13 09:08:51] 2025-10-13 13:07:51,333 | INFO     | intersect: -1163967714.080581
[2025-10-13 09:08:51] 2025-10-13 13:07:51,334 | INFO     | chi2: 0.9380295104207329
[2025-10-13 09:08:51] 2025-10-13 13:07:51,334 | INFO     | current chi2=0.9380295104207329 (change=63.211143669687516 %)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,334 | INFO     | sum of square deviations: 42598504847.78863
[2025-10-13 09:08:51] 2025-10-13 13:07:51,341 | INFO     | sum of deviations: -27341210573.199623
[2025-10-13 09:08:51] 2025-10-13 13:07:51,341 | INFO     | mean x: 1760345110.9515505
[2025-10-13 09:08:51] 2025-10-13 13:07:51,341 | INFO     | mean y: 2452278.3120155036
[2025-10-13 09:08:51] 2025-10-13 13:07:51,341 | INFO     | -- intersect: 1132303350.1279156
[2025-10-13 09:08:51] 2025-10-13 13:07:51,341 | INFO     | intersect: 1132303350.1279156
[2025-10-13 09:08:51] 2025-10-13 13:07:51,342 | INFO     | chi2: 0.5020146306804837
[2025-10-13 09:08:51] 2025-10-13 13:07:51,342 | INFO     | current chi2=0.5020146306804837 (change=46.48200028852868 %)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,343 | INFO     | sum of square deviations: 41372037014.57538
[2025-10-13 09:08:51] 2025-10-13 13:07:51,349 | INFO     | sum of deviations: -66539183278.87674
[2025-10-13 09:08:51] 2025-10-13 13:07:51,350 | INFO     | mean x: 1760345263.4520547
[2025-10-13 09:08:51] 2025-10-13 13:07:51,350 | INFO     | mean y: 2457148.88258317
[2025-10-13 09:08:51] 2025-10-13 13:07:51,350 | INFO     | -- intersect: 2833643248.7517586
[2025-10-13 09:08:51] 2025-10-13 13:07:51,350 | INFO     | intersect: 2833643248.7517586
[2025-10-13 09:08:51] 2025-10-13 13:07:51,351 | INFO     | chi2: 0.27582918123411077
[2025-10-13 09:08:51] 2025-10-13 13:07:51,351 | INFO     | current chi2=0.27582918123411077 (change=45.05554930536133 %)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,352 | INFO     | sum of square deviations: 40169180722.28655
[2025-10-13 09:08:51] 2025-10-13 13:07:51,359 | INFO     | sum of deviations: -91414776533.19165
[2025-10-13 09:08:51] 2025-10-13 13:07:51,359 | INFO     | mean x: 1760345415.9624505
[2025-10-13 09:08:51] 2025-10-13 13:07:51,360 | INFO     | mean y: 2460301.83201581
[2025-10-13 09:08:51] 2025-10-13 13:07:51,360 | INFO     | -- intersect: 4008556018.1968174
[2025-10-13 09:08:51] 2025-10-13 13:07:51,360 | INFO     | intersect: 4008556018.1968174
[2025-10-13 09:08:51] 2025-10-13 13:07:51,361 | INFO     | chi2: 0.17534385631625035
[2025-10-13 09:08:51] 2025-10-13 13:07:51,361 | INFO     | current chi2=0.17534385631625035 (change=36.43027342802183 %)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,362 | INFO     | sum of square deviations: 38990014326.56698
[2025-10-13 09:08:51] 2025-10-13 13:07:51,369 | INFO     | sum of deviations: -94780107337.4691
[2025-10-13 09:08:51] 2025-10-13 13:07:51,369 | INFO     | mean x: 1760345568.463074
[2025-10-13 09:08:51] 2025-10-13 13:07:51,369 | INFO     | mean y: 2460734.109780439
[2025-10-13 09:08:51] 2025-10-13 13:07:51,369 | INFO     | -- intersect: 4281652337.69642
[2025-10-13 09:08:51] 2025-10-13 13:07:51,369 | INFO     | intersect: 4281652337.69642
[2025-10-13 09:08:51] 2025-10-13 13:07:51,370 | INFO     | chi2: 0.16660558999906552
[2025-10-13 09:08:51] 2025-10-13 13:07:51,370 | INFO     | current chi2=0.16660558999906552 (change=4.983502987081842 %)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,370 | INFO     | left removable region: 60
[2025-10-13 09:08:51] 2025-10-13 13:07:51,371 | INFO     | sum of square deviations: 31173883773.858135
[2025-10-13 09:08:51] 2025-10-13 13:07:51,378 | INFO     | sum of deviations: -53710357097.00003
[2025-10-13 09:08:51] 2025-10-13 13:07:51,378 | INFO     | mean x: 1760346300.4709678
[2025-10-13 09:08:51] 2025-10-13 13:07:51,378 | INFO     | mean y: 2459438.0
[2025-10-13 09:08:51] 2025-10-13 13:07:51,378 | INFO     | -- intersect: 3035409361.6782794
[2025-10-13 09:08:51] 2025-10-13 13:07:51,378 | INFO     | intersect: 3035409361.6782794
[2025-10-13 09:08:51] 2025-10-13 13:07:51,379 | INFO     | chi2: 0.13574518605673044
[2025-10-13 09:08:51] 2025-10-13 13:07:51,379 | INFO     | -- intersect: 3035409361.6782794
[2025-10-13 09:08:51] 2025-10-13 13:07:51,379 | INFO     | current memory leak: -1.72 B/s (using 465 data points, chi2=0.14)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,380 | INFO     | could have reported an average CPU frequency of 2600 MHz (21 samples)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,380 | INFO     | ..............................
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . Timing measurements:
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . get job = 0 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . initial setup = 14 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . payload setup = 82 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . stage-in = 0 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . payload execution = 32431 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . stage-out = 3 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | . log creation = 0 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,381 | INFO     | ..............................
[2025-10-13 09:08:51] 2025-10-13 13:07:51,582 | INFO     | time since job start (32650s) is within the limit (172800.0s)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,801 | INFO     | 
[2025-10-13 09:08:51] 2025-10-13 13:07:51,801 | INFO     | job summary report
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | --------------------------------------------------
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | PanDA job id: 6840390890
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | task id: 46676269
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | errors: (none)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | pilot state: finished 
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | transexitcode: 0
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | exeerrorcode: 0
[2025-10-13 09:08:51] 2025-10-13 13:07:51,802 | INFO     | exeerrordiag: 
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | exitcode: 0
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | exitmsg: OK
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | cpuconsumptiontime: 50510 s
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | nevents: 400
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | neventsw: 0
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | pid: 3295229
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | pgrp: 3295229
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | corecount: 9
[2025-10-13 09:08:51] 2025-10-13 13:07:51,803 | INFO     | event service: False
[2025-10-13 09:08:51] 2025-10-13 13:07:51,804 | INFO     | sizes: {0: 2348684, 1: 2348684, 2: 2348712, 3: 2348911, 4: 2348939, 16: 2348967, 27: 2349123, 40: 2349151, 52: 2349179, 62: 2349469, 64: 2349497, 32516: 2388154, 3
[2025-10-13 09:08:51] 2025-10-13 13:07:51,804 | INFO     | --------------------------------------------------
[2025-10-13 09:08:51] 2025-10-13 13:07:51,804 | INFO     | 
[2025-10-13 09:08:51] 2025-10-13 13:07:51,804 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 09:08:51] 2025-10-13 13:07:51,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,838 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:08:51] 2025-10-13 13:07:51,838 | INFO     | job 6840390890 has completed (purged errors)
[2025-10-13 09:08:51] 2025-10-13 13:07:51,838 | INFO     | overall cleanup function is called
[2025-10-13 09:08:51] 2025-10-13 13:07:52,849 | INFO     | --- collectZombieJob: --- 10, [3295229]
[2025-10-13 09:08:51] 2025-10-13 13:07:52,849 | INFO     | zombie collector waiting for pid 3295229
[2025-10-13 09:08:51] 2025-10-13 13:07:52,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:08:51] 2025-10-13 13:07:52,850 | INFO     | collected zombie processes
[2025-10-13 09:08:51] 2025-10-13 13:07:52,850 | INFO     | will attempt to kill all subprocesses of pid=3295229
[2025-10-13 09:08:51] 2025-10-13 13:07:53,357 | INFO     | process IDs to be killed: [3295229] (in reverse order)
[2025-10-13 09:08:51] 2025-10-13 13:07:53,481 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:08:51] 2025-10-13 13:07:53,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:08:51] 2025-10-13 13:07:53,498 | INFO     | did not find any defunct processes belonging to 3295229
[2025-10-13 09:08:51] 2025-10-13 13:07:53,515 | INFO     | did not find any defunct processes belonging to 3295229
[2025-10-13 09:08:51] 2025-10-13 13:07:53,516 | INFO     | ready for new job
[2025-10-13 09:08:51] 2025-10-13 13:07:53,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:08:51] 2025-10-13 13:07:53,519 | INFO     | ***************************************
[2025-10-13 09:08:51] 2025-10-13 13:07:53,520 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:08:51] 2025-10-13 13:07:53,520 | INFO     | ***************************************
[2025-10-13 09:08:51] 2025-10-13 13:07:53,520 | INFO     | 
[2025-10-13 09:08:51] 2025-10-13 13:07:53,540 | INFO     | architecture information:
[2025-10-13 09:08:51] 2025-10-13 13:07:53,541 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:08:51] 2025-10-13 13:07:53,561 | INFO     | cat /etc/os-release:
[2025-10-13 09:08:51] NAME="CentOS Linux"
[2025-10-13 09:08:51] VERSION="7 (Core)"
[2025-10-13 09:08:51] ID="centos"
[2025-10-13 09:08:51] ID_LIKE="rhel fedora"
[2025-10-13 09:08:51] VERSION_ID="7"
[2025-10-13 09:08:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:08:51] ANSI_COLOR="0;31"
[2025-10-13 09:08:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:08:51] HOME_URL="https://www.centos.org/"
[2025-10-13 09:08:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:08:51] 
[2025-10-13 09:08:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:08:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:08:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:08:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:08:51] 
[2025-10-13 09:08:51] 2025-10-13 13:07:53,562 | INFO     | ***************************************
[2025-10-13 09:08:51] 2025-10-13 13:07:54,066 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 09:08:51] 2025-10-13 13:07:54,085 | INFO     | sufficient remaining disk space (76001837056 B)
[2025-10-13 09:08:51] 2025-10-13 13:07:54,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:08:51] 2025-10-13 13:07:54,086 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:08:51] 2025-10-13 13:07:54,086 | INFO     | update_server=False
[2025-10-13 09:08:51] 2025-10-13 13:07:54,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:08:51] 2025-10-13 13:07:54,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:08:51] 2025-10-13 13:07:54,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:08:51] 2025-10-13 13:07:54,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:08:51] 2025-10-13 13:07:54,090 | INFO     | aborting loop
[2025-10-13 09:08:51] 2025-10-13 13:07:54,476 | INFO     | all data control threads have been joined
[2025-10-13 09:08:51] 2025-10-13 13:07:54,524 | INFO     | all payload control threads have been joined
[2025-10-13 09:08:51] 2025-10-13 13:07:54,948 | INFO     | all job control threads have been joined
[2025-10-13 09:08:51] 2025-10-13 13:07:55,091 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,104 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,138 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,427 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,482 | INFO     | [data] control thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,502 | INFO     | [job] validate thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,530 | INFO     | [payload] control thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,548 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,664 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:55,954 | INFO     | [job] control thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:56,056 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:56,096 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:56,110 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:56,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:08:51] 2025-10-13 13:07:57,508 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:07:58,101 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:08:04,575 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:08:51] 2025-10-13 13:08:05,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:08:51] 2025-10-13 13:08:25,217 | INFO     | PID=3276524 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:08:51] 2025-10-13 13:08:25,217 | INFO     | .. there are 26 such processes running
[2025-10-13 09:08:51] 2025-10-13 13:08:25,218 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:08:51] 2025-10-13 13:08:25,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:08:51] 2025-10-13 13:08:25,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:08:51] 2025-10-13 13:08:45,181 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:08:51] 2025-10-13 13:08:45,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598987917120)>', '<ExcThread(monitor, started 140598505895680)>']
[2025-10-13 09:08:51] 2025-10-13 13:08:46,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:08:51] 2025-10-13 13:08:46,352 | INFO     | [monitor] control thread has ended
[2025-10-13 09:08:51] 2025-10-13 13:08:50,683 | INFO     | all workflow threads have been joined
[2025-10-13 09:08:51] 2025-10-13 13:08:50,683 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:08:51] 2025-10-13 13:08:50,684 | INFO     | traces error code: 0
[2025-10-13 09:08:51] 2025-10-13 13:08:50,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:08:51] 2025-10-13 13:08:50,966 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:08:51] 2025-10-13 13:08:50,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:08:51] 2025-10-13 13:08:50,986 [wrapper] pilotpid: 3276524
[2025-10-13 09:08:51] 2025-10-13 13:08:50,990 [wrapper] Pilot exit status: 0
[2025-10-13 09:08:51] 2025-10-13 13:08:51,019 [wrapper] pandaids: 6840390890
[2025-10-13 09:08:51] 2025-10-13 13:08:51,104 [wrapper] cleanup supervisor_pilot  594636 3276525
[2025-10-13 09:08:51] 2025-10-13 13:08:51,109 [wrapper] Test setup, not cleaning
[2025-10-13 09:08:51] 2025-10-13 13:08:51,113 [wrapper] apfmon messages muted
[2025-10-13 09:08:51] 2025-10-13 13:08:51,117 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:08:51] 2025-10-13 13:08:51,121 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:08:51]  *** Error codes and diagnostics ***
[2025-10-13 09:08:51]     "exeErrorCode": 0,
[2025-10-13 09:08:51]     "exeErrorDiag": "",
[2025-10-13 09:08:51]     "pilotErrorCode": 0,
[2025-10-13 09:08:51]     "pilotErrorDiag": "",
[2025-10-13 09:08:51]  *** Listing of results directory ***
[2025-10-13 09:08:51] total 418844
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:34 queuedata.json
[2025-10-13 09:08:51] -rwx------. 1 boincer umatlas     36292 Oct 12 12:36 runpilot2-wrapper.sh
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:08:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 09:08:51] -rw-r--r--. 2 boincer umatlas 220378003 Oct 13 00:01 EVNT.46676267._004749.pool.root.1
[2025-10-13 09:08:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 09:08:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 09:08:51] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 00:01 input.tar.gz
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:01 pandaJob.out
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 09:08:51] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas      6657 Oct 13 09:02 init_data.xml
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas 195931892 Oct 13 09:06 HITS.46676269._083662.pool.root.1
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:07 boinc_task_state.xml
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas      1046 Oct 13 09:07 memory_monitor_summary.json
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas    672545 Oct 13 09:07 log.46676269._083662.job.log.tgz.1
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas        95 Oct 13 09:07 pilot_heartbeat.json
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas      7831 Oct 13 09:07 heartbeat.json
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:08 boinc_mmap_file
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:08 wrapper_checkpoint.txt
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas      4896 Oct 13 09:08 pilotlog.txt
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas   3672742 Oct 13 09:08 log.46676269._083662.job.log.1
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas       357 Oct 13 09:08 output.list
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:08 runtime_log
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas   4362240 Oct 13 09:08 result.tar.gz
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas       656 Oct 13 09:08 tzDLDmTEES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmagkNDme80Rqm.diag
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 09:08 runtime_log.err
[2025-10-13 09:08:51] -rw-r--r--. 1 boincer umatlas     21089 Oct 13 09:08 stderr.txt
[2025-10-13 09:08:51] HITS file was successfully produced:
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas 195931892 Oct 13 09:06 shared/HITS.pool.root.1
[2025-10-13 09:08:51]  *** Contents of shared directory: ***
[2025-10-13 09:08:51] total 411396
[2025-10-13 09:08:51] -rw-r--r--. 2 boincer umatlas 220378003 Oct 13 00:01 ATLAS.root_0
[2025-10-13 09:08:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 09:08:51] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 00:01 input.tar.gz
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas 195931892 Oct 13 09:06 HITS.pool.root.1
[2025-10-13 09:08:51] -rw-------. 1 boincer umatlas   4362240 Oct 13 09:08 result.tar.gz
09:09:12 (3267169): run_atlas exited; CPU time 51684.741665
09:09:12 (3267169): called boinc_finish(0)

</stderr_txt>
]]>

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