Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
21:51:52 (2746759): wrapper (7.7.26015): starting
21:51:52 (2746759): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:51:52] Arguments: --nthreads 8
[2025-10-12 21:51:52] Threads: 8
[2025-10-12 21:51:52] Checking for CVMFS
[2025-10-12 21:51:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:51:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:51:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:51:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:51:53] 2.13.2.0 8166 2021 58984 151635 3 188 3269507 4096000 6377 130560 0 7102456 99.998 76077 367 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 21:51:53] CVMFS is ok
[2025-10-12 21:51:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:51:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 21:51:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 21:51:53] Further information can be found at the LHC@home message board.
[2025-10-12 21:51:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:51:53] Checking for apptainer binary...
[2025-10-12 21:51:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:51:53] Running /usr/bin/apptainer --version
[2025-10-12 21:51:53] apptainer version 1.4.2
[2025-10-12 21:51:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:51:53] JM7
[2025-10-12 21:51:53] apptainer works
[2025-10-12 21:51:53] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:51:53] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:51:53] Starting ATLAS job with PandaID=6840181730
[2025-10-12 21:51:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:02:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:02:16]  status=None
[2025-10-12 23:02:16]  status_code=0
[2025-10-12 23:02:16]  storage_token=
[2025-10-12 23:02:16]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6840181730/log.46676269._080605.job.log.tgz.1
[2025-10-12 23:02:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/ee/log.46676269._080605.job.log.tgz.1
[2025-10-12 23:02:16]  workdir=None
[2025-10-12 23:02:16] ]
[2025-10-12 23:02:16] 2025-10-12 21:01:13,507 | INFO     | transferring file log.46676269._080605.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6840181730/log.46676269._080605.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 23:02:16] 2025-10-12 21:01:13,507 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6840181730/log.46676269._080605.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.466762
[2025-10-12 23:02:16] 2025-10-12 21:01:13,523 | INFO     | adding to output.list: log.46676269._080605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/ee/log.46676269._080605.job.log.tg
[2025-10-12 23:02:16] 2025-10-12 21:01:13,523 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:02:16] 2025-10-12 21:01:13,524 | INFO     | summary of transferred files:
[2025-10-12 23:02:16] 2025-10-12 21:01:13,524 | INFO     |  -- lfn=log.46676269._080605.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:02:16] 2025-10-12 21:01:13,524 | INFO     | stage-out finished correctly
[2025-10-12 23:02:16] 2025-10-12 21:01:13,536 | INFO     | monitor loop #309: job 0:6840181730 is in state 'finished'
[2025-10-12 23:02:16] 2025-10-12 21:01:13,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:02:16] 2025-10-12 21:01:14,154 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:02:16] 2025-10-12 21:01:14,303 | INFO     | PID=2750723 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 23:02:16] 2025-10-12 21:01:14,303 | INFO     | .. there are 2 such processes running
[2025-10-12 23:02:16] 2025-10-12 21:01:15,304 | INFO     | time since job start (4150s) is within the limit (172800.0s)
[2025-10-12 23:02:16] 2025-10-12 21:01:16,060 | INFO     | monitor loop #310: job 0:6840181730 is in state 'finished'
[2025-10-12 23:02:16] 2025-10-12 21:01:16,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:02:16] 2025-10-12 21:01:17,004 | INFO     | job 6840181730 has state=finished
[2025-10-12 23:02:16] 2025-10-12 21:01:17,004 | INFO     | preparing for final server update for job 6840181730 in state='finished'
[2025-10-12 23:02:16] 2025-10-12 21:01:17,005 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:02:16] 2025-10-12 21:01:17,005 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:02:16] 2025-10-12 21:01:17,005 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:02:16] 2025-10-12 21:01:17,006 | INFO     | job 6840181730 has finished - writing final server update
[2025-10-12 23:02:16] 2025-10-12 21:01:17,006 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:02:16] 2025-10-12 21:01:17,008 | INFO     | executing command: lscpu
[2025-10-12 23:02:16] 2025-10-12 21:01:17,058 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:02:16] 2025-10-12 21:01:17,310 | INFO     | time since job start (4152s) is within the limit (172800.0s)
[2025-10-12 23:02:16] 2025-10-12 21:01:18,565 | INFO     | monitor loop #311: job 0:6840181730 is in state 'finished'
[2025-10-12 23:02:16] 2025-10-12 21:01:18,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:02:16] 2025-10-12 21:01:19,315 | INFO     | time since job start (4154s) is within the limit (172800.0s)
[2025-10-12 23:02:16] 2025-10-12 21:01:20,409 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:02:16] 2025-10-12 21:01:20,422 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 1474.6057812499998
[2025-10-12 23:02:16] 2025-10-12 21:01:20,435 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6840181730/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:02:16] 2025-10-12 21:01:20,436 | INFO     | extracted standard info from prmon json
[2025-10-12 23:02:16] 2025-10-12 21:01:20,436 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:02:16] 2025-10-12 21:01:20,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:02:16] 2025-10-12 21:01:20,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:02:16] 2025-10-12 21:01:20,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:02:16] 2025-10-12 21:01:20,440 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:02:16] 2025-10-12 21:01:20,440 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 23:02:16] 2025-10-12 21:01:20,441 | INFO     | sum of deviations: -1170635628.0
[2025-10-12 23:02:16] 2025-10-12 21:01:20,441 | INFO     | mean x: 1760300887.0
[2025-10-12 23:02:16] 2025-10-12 21:01:20,441 | INFO     | mean y: 2532783.770491803
[2025-10-12 23:02:16] 2025-10-12 21:01:20,441 | INFO     | -- intersect: 29288356683.514294
[2025-10-12 23:02:16] 2025-10-12 21:01:20,441 | INFO     | intersect: 29288356683.514294
[2025-10-12 23:02:16] 2025-10-12 21:01:20,442 | INFO     | chi2: 0.027860564902529698
[2025-10-12 23:02:16] 2025-10-12 21:01:20,442 | INFO     | -- intersect: 29288356683.514294
[2025-10-12 23:02:16] 2025-10-12 21:01:20,442 | INFO     | current memory leak: -16.64 B/s (using 61 data points, chi2=0.03)
[2025-10-12 23:02:16] 2025-10-12 21:01:20,442 | INFO     | could have reported an average CPU frequency of 1975 MHz (6 samples)
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | ..............................
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | . Timing measurements:
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | . get job = 0 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | . initial setup = 2 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | . payload setup = 5 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | . stage-in = 0 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | . payload execution = 4121 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,443 | INFO     | . stage-out = 0 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,444 | INFO     | . log creation = 0 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,444 | INFO     | ..............................
[2025-10-12 23:02:16] 2025-10-12 21:01:20,531 | INFO     | 
[2025-10-12 23:02:16] 2025-10-12 21:01:20,531 | INFO     | job summary report
[2025-10-12 23:02:16] 2025-10-12 21:01:20,531 | INFO     | --------------------------------------------------
[2025-10-12 23:02:16] 2025-10-12 21:01:20,531 | INFO     | PanDA job id: 6840181730
[2025-10-12 23:02:16] 2025-10-12 21:01:20,531 | INFO     | task id: 46676269
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | errors: (none)
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | pilot state: finished 
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | transexitcode: 0
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | exeerrorcode: 0
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | exeerrordiag: 
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | exitcode: 0
[2025-10-12 23:02:16] 2025-10-12 21:01:20,532 | INFO     | exitmsg: OK
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | cpuconsumptiontime: 30047 s
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | nevents: 400
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | neventsw: 0
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | pid: 2757576
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | pgrp: 2757576
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | corecount: 8
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | event service: False
[2025-10-12 23:02:16] 2025-10-12 21:01:20,533 | INFO     | sizes: {0: 2348750, 1: 2348892, 5: 2349154, 11: 2349210, 4131: 2375226, 4132: 2384238, 4133: 2384422, 4139: 2384616}
[2025-10-12 23:02:16] 2025-10-12 21:01:20,534 | INFO     | --------------------------------------------------
[2025-10-12 23:02:16] 2025-10-12 21:01:20,534 | INFO     | 
[2025-10-12 23:02:16] 2025-10-12 21:01:20,534 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-12 23:02:16] 2025-10-12 21:01:20,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:02:16] 2025-10-12 21:01:20,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,553 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:02:16] 2025-10-12 21:01:20,553 | INFO     | job 6840181730 has completed (purged errors)
[2025-10-12 23:02:16] 2025-10-12 21:01:20,553 | INFO     | overall cleanup function is called
[2025-10-12 23:02:16] 2025-10-12 21:01:21,562 | INFO     | --- collectZombieJob: --- 10, [2757576]
[2025-10-12 23:02:16] 2025-10-12 21:01:21,563 | INFO     | zombie collector waiting for pid 2757576
[2025-10-12 23:02:16] 2025-10-12 21:01:21,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:02:16] 2025-10-12 21:01:21,563 | INFO     | collected zombie processes
[2025-10-12 23:02:16] 2025-10-12 21:01:21,563 | INFO     | will attempt to kill all subprocesses of pid=2757576
[2025-10-12 23:02:16] 2025-10-12 21:01:21,841 | INFO     | process IDs to be killed: [2757576] (in reverse order)
[2025-10-12 23:02:16] 2025-10-12 21:01:21,902 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:02:16] 2025-10-12 21:01:21,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:02:16] 2025-10-12 21:01:21,909 | INFO     | did not find any defunct processes belonging to 2757576
[2025-10-12 23:02:16] 2025-10-12 21:01:21,916 | INFO     | did not find any defunct processes belonging to 2757576
[2025-10-12 23:02:16] 2025-10-12 21:01:21,916 | INFO     | ready for new job
[2025-10-12 23:02:16] 2025-10-12 21:01:21,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:02:16] 2025-10-12 21:01:21,918 | INFO     | ***************************************
[2025-10-12 23:02:16] 2025-10-12 21:01:21,919 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:02:16] 2025-10-12 21:01:21,919 | INFO     | ***************************************
[2025-10-12 23:02:16] 2025-10-12 21:01:21,919 | INFO     | 
[2025-10-12 23:02:16] 2025-10-12 21:01:21,922 | INFO     | architecture information:
[2025-10-12 23:02:16] 2025-10-12 21:01:21,923 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:02:16] 2025-10-12 21:01:21,935 | INFO     | cat /etc/os-release:
[2025-10-12 23:02:16] NAME="CentOS Linux"
[2025-10-12 23:02:16] VERSION="7 (Core)"
[2025-10-12 23:02:16] ID="centos"
[2025-10-12 23:02:16] ID_LIKE="rhel fedora"
[2025-10-12 23:02:16] VERSION_ID="7"
[2025-10-12 23:02:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:02:16] ANSI_COLOR="0;31"
[2025-10-12 23:02:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:02:16] HOME_URL="https://www.centos.org/"
[2025-10-12 23:02:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:02:16] 
[2025-10-12 23:02:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:02:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:02:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:02:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:02:16] 
[2025-10-12 23:02:16] 2025-10-12 21:01:21,936 | INFO     | ***************************************
[2025-10-12 23:02:16] 2025-10-12 21:01:22,439 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-12 23:02:16] 2025-10-12 21:01:22,451 | INFO     | sufficient remaining disk space (220751462400 B)
[2025-10-12 23:02:16] 2025-10-12 21:01:22,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:02:16] 2025-10-12 21:01:22,452 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:02:16] 2025-10-12 21:01:22,452 | INFO     | update_server=False
[2025-10-12 23:02:16] 2025-10-12 21:01:22,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:02:16] 2025-10-12 21:01:22,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:02:16] 2025-10-12 21:01:22,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:02:16] 2025-10-12 21:01:22,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:02:16] 2025-10-12 21:01:22,454 | INFO     | aborting loop
[2025-10-12 23:02:16] 2025-10-12 21:01:22,650 | INFO     | all payload control threads have been joined
[2025-10-12 23:02:16] 2025-10-12 21:01:23,251 | INFO     | all data control threads have been joined
[2025-10-12 23:02:16] 2025-10-12 21:01:23,458 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:23,458 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:23,459 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:23,553 | INFO     | all job control threads have been joined
[2025-10-12 23:02:16] 2025-10-12 21:01:23,655 | INFO     | [payload] control thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:23,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:23,736 | INFO     | [job] validate thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:23,748 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,174 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,257 | INFO     | [data] control thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,265 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,459 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,497 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,558 | INFO     | [job] control thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:24,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:02:16] 2025-10-12 21:01:28,771 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:32,831 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:02:16] 2025-10-12 21:01:33,837 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:02:16] 2025-10-12 21:01:52,715 | INFO     | PID=2750723 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:02:16] 2025-10-12 21:01:52,715 | INFO     | .. there are 2 such processes running
[2025-10-12 23:02:16] 2025-10-12 21:01:52,716 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:02:16] 2025-10-12 21:01:52,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:02:16] 2025-10-12 21:01:52,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:02:16] 2025-10-12 21:02:09,449 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:02:16] 2025-10-12 21:02:11,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133268727359296)>', '<ExcThread(monitor, started 133268372436736)>']
[2025-10-12 23:02:16] 2025-10-12 21:02:11,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:02:16] 2025-10-12 21:02:11,812 | INFO     | [monitor] control thread has ended
[2025-10-12 23:02:16] 2025-10-12 21:02:16,368 | INFO     | all workflow threads have been joined
[2025-10-12 23:02:16] 2025-10-12 21:02:16,368 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:02:16] 2025-10-12 21:02:16,369 | INFO     | traces error code: 0
[2025-10-12 23:02:16] 2025-10-12 21:02:16,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:02:16] 2025-10-12 21:02:16,470 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:02:16] 2025-10-12 21:02:16,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:02:16] 2025-10-12 21:02:16,475 [wrapper] pilotpid: 2750723
[2025-10-12 23:02:16] 2025-10-12 21:02:16,478 [wrapper] Pilot exit status: 0
[2025-10-12 23:02:16] 2025-10-12 21:02:16,487 [wrapper] pandaids: 6840181730
[2025-10-12 23:02:16] 2025-10-12 21:02:16,521 [wrapper] cleanup supervisor_pilot 2811540 2750724
[2025-10-12 23:02:16] 2025-10-12 21:02:16,524 [wrapper] Test setup, not cleaning
[2025-10-12 23:02:16] 2025-10-12 21:02:16,526 [wrapper] apfmon messages muted
[2025-10-12 23:02:16] 2025-10-12 21:02:16,529 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:02:16] 2025-10-12 21:02:16,532 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:02:16]  *** Error codes and diagnostics ***
[2025-10-12 23:02:16]     "exeErrorCode": 0,
[2025-10-12 23:02:16]     "exeErrorDiag": "",
[2025-10-12 23:02:16]     "pilotErrorCode": 0,
[2025-10-12 23:02:16]     "pilotErrorDiag": "",
[2025-10-12 23:02:16]  *** Listing of results directory ***
[2025-10-12 23:02:16] total 414240
[2025-10-12 23:02:16] -rw-r--r-- 1 josemi7 josemi7    557409 oct 12 15:55 pilot3.tar.gz
[2025-10-12 23:02:16] -rwx------ 1 josemi7 josemi7     36292 oct 12 16:22 runpilot2-wrapper.sh
[2025-10-12 23:02:16] -rw-r--r-- 1 josemi7 josemi7      5112 oct 12 16:22 queuedata.json
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7       100 oct 12 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:02:16] -rwxr-xr-x 1 josemi7 josemi7      7986 oct 12 21:51 run_atlas
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7       105 oct 12 21:51 job.xml
[2025-10-12 23:02:16] -rw-r--r-- 2 josemi7 josemi7 220437601 oct 12 21:51 EVNT.46676267._004229.pool.root.1
[2025-10-12 23:02:16] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 21:51 start_atlas.sh
[2025-10-12 23:02:16] drwxrwx--x 1 josemi7 josemi7        76 oct 12 21:51 shared
[2025-10-12 23:02:16] -rw-r--r-- 2 josemi7 josemi7    569676 oct 12 21:51 input.tar.gz
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7      6165 oct 12 21:51 init_data.xml
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 21:51 boinc_setup_complete
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 21:51 boinc_lockfile
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7      2550 oct 12 21:51 pandaJob.out
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7    975536 oct 12 21:52 agis_schedconf.cvmfs.json
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7   1560580 oct 12 21:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:02:16] drwx------ 1 josemi7 josemi7       414 oct 12 21:52 pilot3
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7 197949977 oct 12 23:00 HITS.46676269._080605.pool.root.1
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7       530 oct 12 23:00 boinc_task_state.xml
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7      1026 oct 12 23:01 memory_monitor_summary.json
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7    329652 oct 12 23:01 log.46676269._080605.job.log.tgz.1
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7      7769 oct 12 23:01 heartbeat.json
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7        95 oct 12 23:01 pilot_heartbeat.json
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7      8192 oct 12 23:01 boinc_mmap_file
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7        27 oct 12 23:01 wrapper_checkpoint.txt
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7      4903 oct 12 23:02 pilotlog.txt
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7    624077 oct 12 23:02 log.46676269._080605.job.log.1
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7       357 oct 12 23:02 output.list
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7       620 oct 12 23:02 runtime_log
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7    972800 oct 12 23:02 result.tar.gz
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7      8729 oct 12 23:02 runtime_log.err
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7       637 oct 12 23:02 J95MDmZ9BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmY5TMDm5io8Ao.diag
[2025-10-12 23:02:16] -rw-rw-r-- 1 josemi7 josemi7     22147 oct 12 23:02 stderr.txt
[2025-10-12 23:02:16] HITS file was successfully produced:
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7 197949977 oct 12 23:00 shared/HITS.pool.root.1
[2025-10-12 23:02:16]  *** Contents of shared directory: ***
[2025-10-12 23:02:16] total 410112
[2025-10-12 23:02:16] -rw-r--r-- 2 josemi7 josemi7 220437601 oct 12 21:51 ATLAS.root_0
[2025-10-12 23:02:16] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 21:51 start_atlas.sh
[2025-10-12 23:02:16] -rw-r--r-- 2 josemi7 josemi7    569676 oct 12 21:51 input.tar.gz
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7 197949977 oct 12 23:00 HITS.pool.root.1
[2025-10-12 23:02:16] -rw------- 1 josemi7 josemi7    972800 oct 12 23:02 result.tar.gz
23:02:17 (2746759): run_atlas exited; CPU time 30166.695934
23:02:17 (2746759): called boinc_finish(0)

</stderr_txt>
]]>

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