Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:48:46 (32531): wrapper (7.7.26015): starting
15:48:46 (32531): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 15:48:46] Arguments: --nthreads 12
[2025-10-12 15:48:46] Threads: 12
[2025-10-12 15:48:46] Checking for CVMFS
[2025-10-12 15:48:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:48:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:48:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:48:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:48:46] 2.11.2.0 2924 223276 102516 151635 0 57 15749087 20275201 1 130560 4 110461500 99.984 13810562 12967 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:48:46] CVMFS is ok
[2025-10-12 15:48:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:48:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:48:46] Further information can be found at the LHC@home message board.
[2025-10-12 15:48:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:48:46] Checking for apptainer binary...
[2025-10-12 15:48:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:48:46] Running /usr/bin/apptainer --version
[2025-10-12 15:48:46] apptainer version 1.3.2-1.el7
[2025-10-12 15:48:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:48:48] c-205-28.aglt2.org
[2025-10-12 15:48:48] apptainer works
[2025-10-12 15:48:48] Set ATHENA_PROC_NUMBER=12
[2025-10-12 15:48:48] Set ATHENA_CORE_NUMBER=12
[2025-10-12 15:48:48] Starting ATLAS job with PandaID=6840390581
[2025-10-12 15:48:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:59:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:59:30] 2025-10-12 20:58:51,206 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840390581/log.46676269._083413.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._083413.job
[2025-10-12 16:59:30] 2025-10-12 20:58:51,248 | INFO     | adding to output.list: log.46676269._083413.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/9b/log.46676269._083413.job.log.tg
[2025-10-12 16:59:30] 2025-10-12 20:58:51,249 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:59:30] 2025-10-12 20:58:51,249 | INFO     | summary of transferred files:
[2025-10-12 16:59:30] 2025-10-12 20:58:51,249 | INFO     |  -- lfn=log.46676269._083413.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:59:30] 2025-10-12 20:58:51,250 | INFO     | stage-out finished correctly
[2025-10-12 16:59:30] 2025-10-12 20:58:51,334 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:59:30] 2025-10-12 20:58:53,159 | INFO     | time since job start (4190s) is within the limit (172800.0s)
[2025-10-12 16:59:30] 2025-10-12 20:58:53,254 | INFO     | job 6840390581 has state=finished
[2025-10-12 16:59:30] 2025-10-12 20:58:53,254 | INFO     | preparing for final server update for job 6840390581 in state='finished'
[2025-10-12 16:59:30] 2025-10-12 20:58:53,255 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:59:30] 2025-10-12 20:58:53,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:59:30] 2025-10-12 20:58:53,255 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:59:30] 2025-10-12 20:58:53,256 | INFO     | job 6840390581 has finished - writing final server update
[2025-10-12 16:59:30] 2025-10-12 20:58:53,256 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:59:30] 2025-10-12 20:58:53,257 | INFO     | executing command: lscpu
[2025-10-12 16:59:30] 2025-10-12 20:58:53,284 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:59:30] 2025-10-12 20:58:53,326 | WARNING  | process 10431 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 16:59:30] 2025-10-12 20:58:53,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840390581/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:59:30] 2025-10-12 20:58:53,327 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840390581/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:59:30] 2025-10-12 20:58:53,327 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 16:59:30] 2025-10-12 20:58:53,327 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 16:59:30] 2025-10-12 20:58:53,328 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3839667 B
[2025-10-12 16:59:30] 2025-10-12 20:58:53,328 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15789 B
[2025-10-12 16:59:30] 2025-10-12 20:58:53,328 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:59:30] 2025-10-12 20:58:55,164 | INFO     | time since job start (4192s) is within the limit (172800.0s)
[2025-10-12 16:59:30] 2025-10-12 20:58:56,282 | INFO     | PID=3927 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:59:30] 2025-10-12 20:58:57,283 | INFO     | time since job start (4194s) is within the limit (172800.0s)
[2025-10-12 16:59:30] 2025-10-12 20:58:57,935 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 16:59:30] 2025-10-12 20:58:57,942 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-10-12 16:59:30] 2025-10-12 20:58:57,945 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840390581/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:59:30] 2025-10-12 20:58:57,946 | INFO     | extracted standard info from prmon json
[2025-10-12 16:59:30] 2025-10-12 20:58:57,946 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:59:30] 2025-10-12 20:58:57,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:59:30] 2025-10-12 20:58:57,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:59:30] 2025-10-12 20:58:57,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:59:30] 2025-10-12 20:58:57,948 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:59:30] 2025-10-12 20:58:57,948 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 16:59:30] 2025-10-12 20:58:57,949 | INFO     | sum of deviations: -6896042558.0
[2025-10-12 16:59:30] 2025-10-12 20:58:57,949 | INFO     | mean x: 1760300737.5
[2025-10-12 16:59:30] 2025-10-12 20:58:57,949 | INFO     | mean y: 2777525.8387096776
[2025-10-12 16:59:30] 2025-10-12 20:58:57,949 | INFO     | -- intersect: 164306085002.42676
[2025-10-12 16:59:30] 2025-10-12 20:58:57,949 | INFO     | intersect: 164306085002.42676
[2025-10-12 16:59:30] 2025-10-12 20:58:57,949 | INFO     | chi2: 0.05005622151082874
[2025-10-12 16:59:30] 2025-10-12 20:58:57,950 | INFO     | -- intersect: 164306085002.42676
[2025-10-12 16:59:30] 2025-10-12 20:58:57,950 | INFO     | current memory leak: -93.34 B/s (using 62 data points, chi2=0.05)
[2025-10-12 16:59:30] 2025-10-12 20:58:57,950 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-10-12 16:59:30] 2025-10-12 20:58:57,950 | INFO     | ..............................
[2025-10-12 16:59:30] 2025-10-12 20:58:57,950 | INFO     | . Timing measurements:
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | . get job = 0 s
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | . initial setup = 2 s
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | . payload setup = 7 s
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | . stage-in = 0 s
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | . payload execution = 4159 s
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | . stage-out = 0 s
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | . log creation = 0 s
[2025-10-12 16:59:30] 2025-10-12 20:58:57,951 | INFO     | ..............................
[2025-10-12 16:59:30] 2025-10-12 20:58:57,973 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-10-12 16:59:30] 2025-10-12 20:58:57,979 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 16:59:30] 2025-10-12 20:58:58,039 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6840390581: 4136126 B (within 2537553920 B limit)
[2025-10-12 16:59:30] 2025-10-12 20:58:58,039 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6840390581/HITS.46676269._083413.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 16:59:30] 2025-10-12 20:58:58,039 | INFO     | total size of present files: 0 B (workdir size: 4136126 B)
[2025-10-12 16:59:30] 2025-10-12 20:58:58,039 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6840390581/HITS.46676269._083413.pool.root.1 since it does not exist
[2025-10-12 16:59:30] 2025-10-12 20:58:58,128 | INFO     | number of running child processes to parent process 10431: 1
[2025-10-12 16:59:30] 2025-10-12 20:58:58,128 | INFO     | maximum number of monitored processes: 6
[2025-10-12 16:59:30] 2025-10-12 20:58:58,128 | INFO     | aborting job monitoring since job object (job id=6840390581) has expired
[2025-10-12 16:59:30] 2025-10-12 20:58:58,362 | INFO     | 
[2025-10-12 16:59:30] 2025-10-12 20:58:58,362 | INFO     | job summary report
[2025-10-12 16:59:30] 2025-10-12 20:58:58,362 | INFO     | --------------------------------------------------
[2025-10-12 16:59:30] 2025-10-12 20:58:58,362 | INFO     | PanDA job id: 6840390581
[2025-10-12 16:59:30] 2025-10-12 20:58:58,363 | INFO     | task id: 46676269
[2025-10-12 16:59:30] 2025-10-12 20:58:58,363 | INFO     | errors: (none)
[2025-10-12 16:59:30] 2025-10-12 20:58:58,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:59:30] 2025-10-12 20:58:58,363 | INFO     | pilot state: finished 
[2025-10-12 16:59:30] 2025-10-12 20:58:58,363 | INFO     | transexitcode: 0
[2025-10-12 16:59:30] 2025-10-12 20:58:58,363 | INFO     | exeerrorcode: 0
[2025-10-12 16:59:30] 2025-10-12 20:58:58,363 | INFO     | exeerrordiag: 
[2025-10-12 16:59:30] 2025-10-12 20:58:58,364 | INFO     | exitcode: 0
[2025-10-12 16:59:30] 2025-10-12 20:58:58,364 | INFO     | exitmsg: OK
[2025-10-12 16:59:30] 2025-10-12 20:58:58,364 | INFO     | cpuconsumptiontime: 45865 s
[2025-10-12 16:59:30] 2025-10-12 20:58:58,364 | INFO     | nevents: 400
[2025-10-12 16:59:30] 2025-10-12 20:58:58,364 | INFO     | neventsw: 0
[2025-10-12 16:59:30] 2025-10-12 20:58:58,364 | INFO     | pid: 10431
[2025-10-12 16:59:30] 2025-10-12 20:58:58,365 | INFO     | pgrp: 10431
[2025-10-12 16:59:30] 2025-10-12 20:58:58,365 | INFO     | corecount: 12
[2025-10-12 16:59:30] 2025-10-12 20:58:58,365 | INFO     | event service: False
[2025-10-12 16:59:30] 2025-10-12 20:58:58,365 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4169: 2375073, 4170: 2375072, 4171: 2384126, 4172: 2384310, 4178: 2384504}
[2025-10-12 16:59:30] 2025-10-12 20:58:58,365 | INFO     | --------------------------------------------------
[2025-10-12 16:59:30] 2025-10-12 20:58:58,365 | INFO     | 
[2025-10-12 16:59:30] 2025-10-12 20:58:58,366 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:59:30] 2025-10-12 20:58:58,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:59:30] 2025-10-12 20:58:58,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:59:30] 2025-10-12 20:58:58,393 | INFO     | job 6840390581 has completed (purged errors)
[2025-10-12 16:59:30] 2025-10-12 20:58:58,394 | INFO     | overall cleanup function is called
[2025-10-12 16:59:30] 2025-10-12 20:58:59,401 | INFO     | --- collectZombieJob: --- 10, [10431]
[2025-10-12 16:59:30] 2025-10-12 20:58:59,401 | INFO     | zombie collector waiting for pid 10431
[2025-10-12 16:59:30] 2025-10-12 20:58:59,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:59:30] 2025-10-12 20:58:59,402 | INFO     | collected zombie processes
[2025-10-12 16:59:30] 2025-10-12 20:58:59,402 | INFO     | will attempt to kill all subprocesses of pid=10431
[2025-10-12 16:59:30] 2025-10-12 20:58:59,491 | INFO     | process IDs to be killed: [10431] (in reverse order)
[2025-10-12 16:59:30] 2025-10-12 20:58:59,546 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:59:30] 2025-10-12 20:58:59,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:59:30] 2025-10-12 20:58:59,548 | INFO     | did not find any defunct processes belonging to 10431
[2025-10-12 16:59:30] 2025-10-12 20:58:59,551 | INFO     | did not find any defunct processes belonging to 10431
[2025-10-12 16:59:30] 2025-10-12 20:58:59,551 | INFO     | ready for new job
[2025-10-12 16:59:30] 2025-10-12 20:58:59,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:59:30] 2025-10-12 20:58:59,552 | INFO     | ***************************************
[2025-10-12 16:59:30] 2025-10-12 20:58:59,552 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:59:30] 2025-10-12 20:58:59,552 | INFO     | ***************************************
[2025-10-12 16:59:30] 2025-10-12 20:58:59,552 | INFO     | 
[2025-10-12 16:59:30] 2025-10-12 20:58:59,553 | INFO     | architecture information:
[2025-10-12 16:59:30] 2025-10-12 20:58:59,553 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:59:30] 2025-10-12 20:58:59,569 | INFO     | cat /etc/os-release:
[2025-10-12 16:59:30] NAME="CentOS Linux"
[2025-10-12 16:59:30] VERSION="7 (Core)"
[2025-10-12 16:59:30] ID="centos"
[2025-10-12 16:59:30] ID_LIKE="rhel fedora"
[2025-10-12 16:59:30] VERSION_ID="7"
[2025-10-12 16:59:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:59:30] ANSI_COLOR="0;31"
[2025-10-12 16:59:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:59:30] HOME_URL="https://www.centos.org/"
[2025-10-12 16:59:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:59:30] 
[2025-10-12 16:59:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:59:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:59:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:59:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:59:30] 
[2025-10-12 16:59:30] 2025-10-12 20:58:59,569 | INFO     | ***************************************
[2025-10-12 16:59:30] 2025-10-12 20:59:00,073 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:59:30] 2025-10-12 20:59:00,090 | INFO     | sufficient remaining disk space (29364322304 B)
[2025-10-12 16:59:30] 2025-10-12 20:59:00,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:59:30] 2025-10-12 20:59:00,091 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:59:30] 2025-10-12 20:59:00,091 | INFO     | update_server=False
[2025-10-12 16:59:30] 2025-10-12 20:59:00,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:59:30] 2025-10-12 20:59:00,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:59:30] 2025-10-12 20:59:00,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:59:30] 2025-10-12 20:59:00,092 | INFO     | aborting loop
[2025-10-12 16:59:30] 2025-10-12 20:59:00,138 | INFO     | all payload control threads have been joined
[2025-10-12 16:59:30] 2025-10-12 20:59:00,923 | INFO     | all data control threads have been joined
[2025-10-12 16:59:30] 2025-10-12 20:59:01,097 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,097 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,144 | INFO     | [payload] control thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,182 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,225 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,259 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,444 | INFO     | all job control threads have been joined
[2025-10-12 16:59:30] 2025-10-12 20:59:01,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,761 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,884 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:01,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:59:30] 2025-10-12 20:59:01,928 | INFO     | [data] control thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:02,097 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:02,400 | INFO     | [job] validate thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:02,414 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:02,448 | INFO     | [job] control thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:03,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:59:30] 2025-10-12 20:59:04,054 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:05,931 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:59:30] 2025-10-12 20:59:09,497 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:59:30] 2025-10-12 20:59:11,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554746824512)>', '<ExcThread(monitor, started 140553769428736)>']
[2025-10-12 16:59:30] 2025-10-12 20:59:16,493 | INFO     | all workflow threads have been joined
[2025-10-12 16:59:30] 2025-10-12 20:59:16,494 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:59:30] 2025-10-12 20:59:16,494 | INFO     | traces error code: 0
[2025-10-12 16:59:30] 2025-10-12 20:59:16,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:59:30] 2025-10-12 20:59:30,493 | INFO     | PID=3927 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:59:30] 2025-10-12 20:59:30,493 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:59:30] 2025-10-12 20:59:30,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:59:30] 2025-10-12 20:59:30,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:59:30] 2025-10-12 20:59:30,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:59:30] 2025-10-12 20:59:30,494 | INFO     | [monitor] control thread has ended
[2025-10-12 16:59:30] 2025-10-12 20:59:30,589 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:59:30] 2025-10-12 20:59:30,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:59:30] 2025-10-12 20:59:30,597 [wrapper] pilotpid: 3927
[2025-10-12 16:59:30] 2025-10-12 20:59:30,601 [wrapper] Pilot exit status: 0
[2025-10-12 16:59:30] 2025-10-12 20:59:30,616 [wrapper] pandaids: 6840390581
[2025-10-12 16:59:30] 2025-10-12 20:59:30,657 [wrapper] cleanup supervisor_pilot 20464 3928
[2025-10-12 16:59:30] 2025-10-12 20:59:30,661 [wrapper] Test setup, not cleaning
[2025-10-12 16:59:30] 2025-10-12 20:59:30,665 [wrapper] apfmon messages muted
[2025-10-12 16:59:30] 2025-10-12 20:59:30,669 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:59:30] 2025-10-12 20:59:30,673 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:59:30]  *** Error codes and diagnostics ***
[2025-10-12 16:59:30]     "exeErrorCode": 0,
[2025-10-12 16:59:30]     "exeErrorDiag": "",
[2025-10-12 16:59:30]     "pilotErrorCode": 0,
[2025-10-12 16:59:30]     "pilotErrorDiag": "",
[2025-10-12 16:59:30]  *** Listing of results directory ***
[2025-10-12 16:59:30] total 409512
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:25 queuedata.json
[2025-10-12 16:59:30] -rwx------ 1 boincer umatlas     36292 Oct 12 12:25 runpilot2-wrapper.sh
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:59:30] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:48 run_atlas
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:48 job.xml
[2025-10-12 16:59:30] -rw-r--r-- 2 boincer umatlas 223408436 Oct 12 15:48 EVNT.46676267._004739.pool.root.1
[2025-10-12 16:59:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:48 start_atlas.sh
[2025-10-12 16:59:30] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:48 shared
[2025-10-12 16:59:30] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 15:48 input.tar.gz
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:48 boinc_lockfile
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:48 pandaJob.out
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas    975536 Oct 12 15:49 agis_schedconf.cvmfs.json
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas   1560580 Oct 12 15:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:59:30] drwx------ 5 boincer umatlas      4096 Oct 12 15:49 pilot3
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas 190070083 Oct 12 16:58 HITS.46676269._083413.pool.root.1
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 16:58 init_data.xml
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas       529 Oct 12 16:58 boinc_task_state.xml
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas      1050 Oct 12 16:58 memory_monitor_summary.json
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas    367771 Oct 12 16:58 log.46676269._083413.job.log.tgz.1
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas      7855 Oct 12 16:58 heartbeat.json
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas        95 Oct 12 16:58 pilot_heartbeat.json
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:59 boinc_mmap_file
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas        27 Oct 12 16:59 wrapper_checkpoint.txt
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas       744 Oct 12 16:59 pilotlog.txt
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas    612745 Oct 12 16:59 log.46676269._083413.job.log.1
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas       357 Oct 12 16:59 output.list
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:59 runtime_log
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas   1003520 Oct 12 16:59 result.tar.gz
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 16:59 runtime_log.err
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas       659 Oct 12 16:59 g9NKDmV4DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmadkNDmydE6Fo.diag
[2025-10-12 16:59:30] -rw-r--r-- 1 boincer umatlas     22743 Oct 12 16:59 stderr.txt
[2025-10-12 16:59:30] HITS file was successfully produced:
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas 190070083 Oct 12 16:58 shared/HITS.pool.root.1
[2025-10-12 16:59:30]  *** Contents of shared directory: ***
[2025-10-12 16:59:30] total 405352
[2025-10-12 16:59:30] -rw-r--r-- 2 boincer umatlas 223408436 Oct 12 15:48 ATLAS.root_0
[2025-10-12 16:59:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:48 start_atlas.sh
[2025-10-12 16:59:30] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 15:48 input.tar.gz
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas 190070083 Oct 12 16:58 HITS.pool.root.1
[2025-10-12 16:59:30] -rw------- 1 boincer umatlas   1003520 Oct 12 16:59 result.tar.gz
16:59:31 (32531): run_atlas exited; CPU time 45838.671476
16:59:31 (32531): called boinc_finish(0)

</stderr_txt>
]]>

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