Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:52:40 (3276535): wrapper (7.7.26015): starting
07:52:40 (3276535): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 07:52:40] Arguments: --nthreads 3
[2025-10-13 07:52:40] Threads: 3
[2025-10-13 07:52:40] Checking for CVMFS
[2025-10-13 07:52:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:52:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:52:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:52:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:52:40] 2.9.2.0 1615862 5317 85920 151650 0 57 31609681 36864000 0 130560 0 4202273 99.991 185407 908 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 07:52:40] CVMFS is ok
[2025-10-13 07:52:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:52:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:52:40] Further information can be found at the LHC@home message board.
[2025-10-13 07:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:52:40] Checking for apptainer binary...
[2025-10-13 07:52:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:52:40] Running /usr/bin/apptainer --version
[2025-10-13 07:52:40] apptainer version 1.4.1-1.1
[2025-10-13 07:52:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:52:40] thA323
[2025-10-13 07:52:40] apptainer works
[2025-10-13 07:52:40] Set ATHENA_PROC_NUMBER=3
[2025-10-13 07:52:40] Set ATHENA_CORE_NUMBER=3
[2025-10-13 07:52:40] Starting ATLAS job with PandaID=6839588812
[2025-10-13 07:52:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:12:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:12:58] 2025-10-13 07:12:03,048 | INFO     | all data control threads have been joined
[2025-10-13 09:12:58] 2025-10-13 07:12:03,049 | INFO     | all payload control threads have been joined
[2025-10-13 09:12:58] 2025-10-13 07:12:03,175 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:03,198 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:03,360 | INFO     | all job control threads have been joined
[2025-10-13 09:12:58] 2025-10-13 07:12:03,428 | INFO     | [job] validate thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:03,458 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:03,564 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:03,598 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:03,620 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:04,015 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:04,054 | INFO     | [payload] control thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:04,054 | INFO     | [data] control thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:04,121 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:04,366 | INFO     | [job] control thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:06,016 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:12,641 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:12:58] 2025-10-13 07:12:13,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:12:58] 2025-10-13 07:12:31,646 | INFO     | PID=3280254 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:12:58] 2025-10-13 07:12:31,646 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:12:58] 2025-10-13 07:12:31,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:12:58] 2025-10-13 07:12:31,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:12:58] 2025-10-13 07:12:52,389 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:12:58] 2025-10-13 07:12:53,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139856229013312)>', '<ExcThread(monitor, started 139855602378496)>']
[2025-10-13 09:12:58] 2025-10-13 07:12:53,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:12:58] 2025-10-13 07:12:53,755 | INFO     | [monitor] control thread has ended
[2025-10-13 09:12:58] 2025-10-13 07:12:58,338 | INFO     | all workflow threads have been joined
[2025-10-13 09:12:58] 2025-10-13 07:12:58,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:12:58] 2025-10-13 07:12:58,338 | INFO     | traces error code: 0
[2025-10-13 09:12:58] 2025-10-13 07:12:58,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:12:58] 2025-10-13 07:12:58,390 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:12:58] 2025-10-13 07:12:58,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:12:58] 2025-10-13 07:12:58,395 [wrapper] pilotpid: 3280254
[2025-10-13 09:12:58] 2025-10-13 07:12:58,397 [wrapper] Pilot exit status: 0
[2025-10-13 09:12:58] 2025-10-13 07:12:58,405 [wrapper] pandaids: 6839588812
[2025-10-13 09:12:58] 2025-10-13 07:12:58,425 [wrapper] cleanup supervisor_pilot 3298698 3280255
[2025-10-13 09:12:58] 2025-10-13 07:12:58,428 [wrapper] Test setup, not cleaning
[2025-10-13 09:12:58] 2025-10-13 07:12:58,430 [wrapper] apfmon messages muted
[2025-10-13 09:12:58] 2025-10-13 07:12:58,433 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:12:58] 2025-10-13 07:12:58,435 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:12:58]  *** Error codes and diagnostics ***
[2025-10-13 09:12:58]     "exeErrorCode": 0,
[2025-10-13 09:12:58]     "exeErrorDiag": "",
[2025-10-13 09:12:58]     "pilotErrorCode": 0,
[2025-10-13 09:12:58]     "pilotErrorDiag": "",
[2025-10-13 09:12:58]  *** Listing of results directory ***
[2025-10-13 09:12:58] total 405408
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-13 09:12:58] -rwx------ 1 boinc boinc     36292 Oct 12 07:29 runpilot2-wrapper.sh
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:29 queuedata.json
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:12:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:52 run_atlas
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:52 job.xml
[2025-10-13 09:12:58] -rw-r--r-- 2 boinc boinc 219500944 Oct 13 07:52 EVNT.46676267._004323.pool.root.1
[2025-10-13 09:12:58] -rw-r--r-- 2 boinc boinc    569680 Oct 13 07:52 input.tar.gz
[2025-10-13 09:12:58] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:52 start_atlas.sh
[2025-10-13 09:12:58] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:52 shared
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:52 boinc_setup_complete
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc      6446 Oct 13 07:52 init_data.xml
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:52 boinc_lockfile
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:52 pandaJob.out
[2025-10-13 09:12:58] -rw------- 1 boinc boinc    973230 Oct 13 07:52 agis_schedconf.cvmfs.json
[2025-10-13 09:12:58] -rw------- 1 boinc boinc   1560580 Oct 13 07:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:12:58] drwx------ 5 boinc boinc      4096 Oct 13 07:52 pilot3
[2025-10-13 09:12:58] -rw------- 1 boinc boinc 189844533 Oct 13 09:11 HITS.46676269._072004.pool.root.1
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:11 boinc_task_state.xml
[2025-10-13 09:12:58] -rw------- 1 boinc boinc      1030 Oct 13 09:11 memory_monitor_summary.json
[2025-10-13 09:12:58] -rw------- 1 boinc boinc    249675 Oct 13 09:11 log.46676269._072004.job.log.tgz.1
[2025-10-13 09:12:58] -rw------- 1 boinc boinc      7753 Oct 13 09:12 heartbeat.json
[2025-10-13 09:12:58] -rw------- 1 boinc boinc        95 Oct 13 09:12 pilot_heartbeat.json
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:12 wrapper_checkpoint.txt
[2025-10-13 09:12:58] -rw------- 1 boinc boinc      5010 Oct 13 09:12 pilotlog.txt
[2025-10-13 09:12:58] -rw------- 1 boinc boinc    700447 Oct 13 09:12 log.46676269._072004.job.log.1
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:12 boinc_mmap_file
[2025-10-13 09:12:58] -rw------- 1 boinc boinc       357 Oct 13 09:12 output.list
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:12 runtime_log
[2025-10-13 09:12:58] -rw------- 1 boinc boinc    972800 Oct 13 09:12 result.tar.gz
[2025-10-13 09:12:58] -rw------- 1 boinc boinc       658 Oct 13 09:12 te0KDmxo3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlITMDm9MlNGn.diag
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc      8777 Oct 13 09:12 runtime_log.err
[2025-10-13 09:12:58] -rw-r--r-- 1 boinc boinc      6504 Oct 13 09:12 stderr.txt
[2025-10-13 09:12:58] HITS file was successfully produced:
[2025-10-13 09:12:58] -rw------- 1 boinc boinc 189844533 Oct 13 09:11 shared/HITS.pool.root.1
[2025-10-13 09:12:58]  *** Contents of shared directory: ***
[2025-10-13 09:12:58] total 401292
[2025-10-13 09:12:58] -rw-r--r-- 2 boinc boinc 219500944 Oct 13 07:52 ATLAS.root_0
[2025-10-13 09:12:58] -rw-r--r-- 2 boinc boinc    569680 Oct 13 07:52 input.tar.gz
[2025-10-13 09:12:58] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:52 start_atlas.sh
[2025-10-13 09:12:58] -rw------- 1 boinc boinc 189844533 Oct 13 09:11 HITS.pool.root.1
[2025-10-13 09:12:58] -rw------- 1 boinc boinc    972800 Oct 13 09:12 result.tar.gz
09:13:19 (3276535): run_atlas exited; CPU time 13611.252984
09:13:19 (3276535): called boinc_finish(0)

</stderr_txt>
]]>

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