Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:38:32 (2485873): wrapper (7.7.26015): starting
01:38:32 (2485873): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 01:38:32] Arguments: --nthreads 12
[2025-10-13 01:38:32] Threads: 12
[2025-10-13 01:38:32] Checking for CVMFS
[2025-10-13 01:38:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:38:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:38:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:38:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:38:32] 2.13.2.0 8715 29718 236540 151641 0 188 40409589 46080000 6454 130560 0 201408137 99.891 56057816 21598 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-13 01:38:32] CVMFS is ok
[2025-10-13 01:38:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:38:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:38:32] Further information can be found at the LHC@home message board.
[2025-10-13 01:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:38:32] Checking for apptainer binary...
[2025-10-13 01:38:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:38:32] Running /usr/bin/apptainer --version
[2025-10-13 01:38:32] apptainer version 1.4.2-1.el9
[2025-10-13 01:38:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:38:33] mff2104.farm.particle.cz
[2025-10-13 01:38:33] apptainer works
[2025-10-13 01:38:33] Set ATHENA_PROC_NUMBER=12
[2025-10-13 01:38:33] Set ATHENA_CORE_NUMBER=12
[2025-10-13 01:38:33] Starting ATLAS job with PandaID=6839319383
[2025-10-13 01:38:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:32:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:32:57]  status_code=0
[2025-10-13 02:32:57]  storage_token=
[2025-10-13 02:32:57]  surl=/scratch/.boinc/slots/3/PanDA_Pilot-6839319383/log.46676269._070085.job.log.tgz.1
[2025-10-13 02:32:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/74/log.46676269._070085.job.log.tgz.1
[2025-10-13 02:32:57]  workdir=None
[2025-10-13 02:32:57] ]
[2025-10-13 02:32:57] 2025-10-13 00:32:13,981 | INFO     | transferring file log.46676269._070085.job.log.tgz.1 from /scratch/.boinc/slots/3/PanDA_Pilot-6839319383/log.46676269._070085.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-13 02:32:57] 2025-10-13 00:32:13,982 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/3/PanDA_Pilot-6839319383/log.46676269._070085.job.log.tgz.1 /scratch/.boinc/slots/3/log.46676269._070085.j
[2025-10-13 02:32:57] 2025-10-13 00:32:14,006 | INFO     | adding to output.list: log.46676269._070085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/74/log.46676269._070085.job.log.tg
[2025-10-13 02:32:57] 2025-10-13 00:32:14,008 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 02:32:57] 2025-10-13 00:32:14,008 | INFO     | summary of transferred files:
[2025-10-13 02:32:57] 2025-10-13 00:32:14,008 | INFO     |  -- lfn=log.46676269._070085.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 02:32:57] 2025-10-13 00:32:14,008 | INFO     | stage-out finished correctly
[2025-10-13 02:32:57] 2025-10-13 00:32:14,651 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 02:32:57] 2025-10-13 00:32:15,393 | INFO     | time since job start (3210s) is within the limit (172800.0s)
[2025-10-13 02:32:57] 2025-10-13 00:32:16,186 | WARNING  | process 2497023 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 02:32:57] 2025-10-13 00:32:16,187 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6839319383/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:32:57] 2025-10-13 00:32:16,518 | INFO     | number of running child processes to parent process 2497023: 1
[2025-10-13 02:32:57] 2025-10-13 00:32:16,519 | INFO     | maximum number of monitored processes: 6
[2025-10-13 02:32:57] 2025-10-13 00:32:16,986 | INFO     | job 6839319383 has state=finished
[2025-10-13 02:32:57] 2025-10-13 00:32:16,987 | INFO     | preparing for final server update for job 6839319383 in state='finished'
[2025-10-13 02:32:57] 2025-10-13 00:32:16,987 | INFO     | this job has now completed (state=finished)
[2025-10-13 02:32:57] 2025-10-13 00:32:16,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 02:32:57] 2025-10-13 00:32:16,988 | INFO     | log transfer has been attempted: DONE
[2025-10-13 02:32:57] 2025-10-13 00:32:16,988 | INFO     | job 6839319383 has finished - writing final server update
[2025-10-13 02:32:57] 2025-10-13 00:32:16,988 | INFO     | total number of processed events: 400 (read)
[2025-10-13 02:32:57] 2025-10-13 00:32:16,989 | INFO     | executing command: lscpu
[2025-10-13 02:32:57] 2025-10-13 00:32:17,068 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 02:32:57] 2025-10-13 00:32:17,400 | INFO     | time since job start (3212s) is within the limit (172800.0s)
[2025-10-13 02:32:57] 2025-10-13 00:32:19,025 | INFO     | monitor loop #232: job 0:6839319383 is in state 'finished'
[2025-10-13 02:32:57] 2025-10-13 00:32:19,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 02:32:57] 2025-10-13 00:32:19,406 | INFO     | time since job start (3214s) is within the limit (172800.0s)
[2025-10-13 02:32:57] 2025-10-13 00:32:21,411 | INFO     | time since job start (3216s) is within the limit (172800.0s)
[2025-10-13 02:32:57] 2025-10-13 00:32:21,529 | INFO     | monitor loop #233: job 0:6839319383 is in state 'finished'
[2025-10-13 02:32:57] 2025-10-13 00:32:21,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,414 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 02:32:57] 2025-10-13 00:32:23,416 | INFO     | time since job start (3218s) is within the limit (172800.0s)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,431 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2764.4128437499985
[2025-10-13 02:32:57] 2025-10-13 00:32:23,449 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6839319383/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,450 | INFO     | extracted standard info from prmon json
[2025-10-13 02:32:57] 2025-10-13 00:32:23,450 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:32:57] 2025-10-13 00:32:23,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:32:57] 2025-10-13 00:32:23,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:32:57] 2025-10-13 00:32:23,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:32:57] 2025-10-13 00:32:23,452 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:32:57] 2025-10-13 00:32:23,452 | INFO     | sum of square deviations: 30168007.5
[2025-10-13 02:32:57] 2025-10-13 00:32:23,453 | INFO     | sum of deviations: 469061604.5
[2025-10-13 02:32:57] 2025-10-13 00:32:23,453 | INFO     | mean x: 1760314031.5
[2025-10-13 02:32:57] 2025-10-13 00:32:23,453 | INFO     | mean y: 2722731.1086956523
[2025-10-13 02:32:57] 2025-10-13 00:32:23,453 | INFO     | -- intersect: -27367189718.0066
[2025-10-13 02:32:57] 2025-10-13 00:32:23,453 | INFO     | intersect: -27367189718.0066
[2025-10-13 02:32:57] 2025-10-13 00:32:23,453 | INFO     | chi2: 0.032812507088070576
[2025-10-13 02:32:57] 2025-10-13 00:32:23,453 | INFO     | -- intersect: -27367189718.0066
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | current memory leak: 15.55 B/s (using 46 data points, chi2=0.03)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | could have reported an average CPU frequency of 2760 MHz (5 samples)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | ..............................
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | . Timing measurements:
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | . get job = 0 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | . initial setup = 1 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | . payload setup = 6 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,454 | INFO     | . stage-in = 0 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,455 | INFO     | . payload execution = 3180 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,455 | INFO     | . stage-out = 0 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,455 | INFO     | . log creation = 0 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,455 | INFO     | ..............................
[2025-10-13 02:32:57] 2025-10-13 00:32:23,680 | INFO     | 
[2025-10-13 02:32:57] 2025-10-13 00:32:23,680 | INFO     | job summary report
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | --------------------------------------------------
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | PanDA job id: 6839319383
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | task id: 46676269
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | errors: (none)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | pilot state: finished 
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | transexitcode: 0
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | exeerrorcode: 0
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | exeerrordiag: 
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | exitcode: 0
[2025-10-13 02:32:57] 2025-10-13 00:32:23,681 | INFO     | exitmsg: OK
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | cpuconsumptiontime: 32925 s
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | nevents: 400
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | neventsw: 0
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | pid: 2497023
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | pgrp: 2497023
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | corecount: 12
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | event service: False
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | sizes: {0: 2348744, 1: 2348886, 6: 2349148, 11: 2349176, 3190: 2374566, 3191: 2374565, 3192: 2383749, 3193: 2383805, 3201: 2384031}
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | --------------------------------------------------
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | 
[2025-10-13 02:32:57] 2025-10-13 00:32:23,682 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-10-13 02:32:57] 2025-10-13 00:32:23,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:32:57] 2025-10-13 00:32:23,751 | INFO     | job 6839319383 has completed (purged errors)
[2025-10-13 02:32:57] 2025-10-13 00:32:23,751 | INFO     | overall cleanup function is called
[2025-10-13 02:32:57] 2025-10-13 00:32:24,760 | INFO     | --- collectZombieJob: --- 10, [2497023]
[2025-10-13 02:32:57] 2025-10-13 00:32:24,761 | INFO     | zombie collector waiting for pid 2497023
[2025-10-13 02:32:57] 2025-10-13 00:32:24,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:32:57] 2025-10-13 00:32:24,761 | INFO     | collected zombie processes
[2025-10-13 02:32:57] 2025-10-13 00:32:24,761 | INFO     | will attempt to kill all subprocesses of pid=2497023
[2025-10-13 02:32:57] 2025-10-13 00:32:25,119 | INFO     | process IDs to be killed: [2497023] (in reverse order)
[2025-10-13 02:32:57] 2025-10-13 00:32:25,272 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:32:57] 2025-10-13 00:32:25,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:32:57] 2025-10-13 00:32:25,284 | INFO     | did not find any defunct processes belonging to 2497023
[2025-10-13 02:32:57] 2025-10-13 00:32:25,294 | INFO     | did not find any defunct processes belonging to 2497023
[2025-10-13 02:32:57] 2025-10-13 00:32:25,295 | INFO     | ready for new job
[2025-10-13 02:32:57] 2025-10-13 00:32:25,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:32:57] 2025-10-13 00:32:25,304 | INFO     | ***************************************
[2025-10-13 02:32:57] 2025-10-13 00:32:25,304 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:32:57] 2025-10-13 00:32:25,304 | INFO     | ***************************************
[2025-10-13 02:32:57] 2025-10-13 00:32:25,305 | INFO     | 
[2025-10-13 02:32:57] 2025-10-13 00:32:25,311 | INFO     | architecture information:
[2025-10-13 02:32:57] 2025-10-13 00:32:25,311 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:32:57] 2025-10-13 00:32:25,330 | INFO     | cat /etc/os-release:
[2025-10-13 02:32:57] NAME="CentOS Linux"
[2025-10-13 02:32:57] VERSION="7 (Core)"
[2025-10-13 02:32:57] ID="centos"
[2025-10-13 02:32:57] ID_LIKE="rhel fedora"
[2025-10-13 02:32:57] VERSION_ID="7"
[2025-10-13 02:32:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:32:57] ANSI_COLOR="0;31"
[2025-10-13 02:32:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:32:57] HOME_URL="https://www.centos.org/"
[2025-10-13 02:32:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:32:57] 
[2025-10-13 02:32:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:32:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:32:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:32:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:32:57] 
[2025-10-13 02:32:57] 2025-10-13 00:32:25,330 | INFO     | ***************************************
[2025-10-13 02:32:57] 2025-10-13 00:32:25,833 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-10-13 02:32:57] 2025-10-13 00:32:25,855 | INFO     | sufficient remaining disk space (1681284661248 B)
[2025-10-13 02:32:57] 2025-10-13 00:32:25,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:32:57] 2025-10-13 00:32:25,855 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:32:57] 2025-10-13 00:32:25,855 | INFO     | update_server=False
[2025-10-13 02:32:57] 2025-10-13 00:32:25,855 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:32:57] 2025-10-13 00:32:25,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:32:57] 2025-10-13 00:32:25,856 | INFO     | aborting loop
[2025-10-13 02:32:57] 2025-10-13 00:32:25,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:32:57] 2025-10-13 00:32:26,164 | INFO     | all payload control threads have been joined
[2025-10-13 02:32:57] 2025-10-13 00:32:26,555 | INFO     | all data control threads have been joined
[2025-10-13 02:32:57] 2025-10-13 00:32:26,861 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:26,861 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:26,902 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:32:57] 2025-10-13 00:32:27,122 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,170 | INFO     | [payload] control thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,492 | INFO     | all job control threads have been joined
[2025-10-13 02:32:57] 2025-10-13 00:32:27,561 | INFO     | [data] control thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,724 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,725 | INFO     | [job] validate thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,890 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:27,907 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:28,179 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:28,497 | INFO     | [job] control thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:28,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:32:57] 2025-10-13 00:32:29,122 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:29,560 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:29,862 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:32:57] 2025-10-13 00:32:49,490 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:32:57] 2025-10-13 00:32:49,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555343128384)>', '<ExcThread(monitor, started 140554843170560)>']
[2025-10-13 02:32:57] 2025-10-13 00:32:54,580 | INFO     | all workflow threads have been joined
[2025-10-13 02:32:57] 2025-10-13 00:32:54,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:32:57] 2025-10-13 00:32:54,581 | INFO     | traces error code: 0
[2025-10-13 02:32:57] 2025-10-13 00:32:54,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:32:57] 2025-10-13 00:32:56,930 | INFO     | PID=2489948 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:32:57] 2025-10-13 00:32:56,931 | INFO     | .. there are 8 such processes running
[2025-10-13 02:32:57] 2025-10-13 00:32:56,932 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:32:57] 2025-10-13 00:32:56,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:32:57] 2025-10-13 00:32:56,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:32:57] 2025-10-13 00:32:56,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:32:57] 2025-10-13 00:32:56,932 | INFO     | [monitor] control thread has ended
[2025-10-13 02:32:57] 2025-10-13 00:32:57,082 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:32:57] 2025-10-13 00:32:57,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:32:57] 2025-10-13 00:32:57,090 [wrapper] pilotpid: 2489948
[2025-10-13 02:32:57] 2025-10-13 00:32:57,093 [wrapper] Pilot exit status: 0
[2025-10-13 02:32:57] 2025-10-13 00:32:57,108 [wrapper] pandaids: 6839319383
[2025-10-13 02:32:57] 2025-10-13 00:32:57,189 [wrapper] cleanup supervisor_pilot 2680302 2489949
[2025-10-13 02:32:57] 2025-10-13 00:32:57,193 [wrapper] Test setup, not cleaning
[2025-10-13 02:32:57] 2025-10-13 00:32:57,196 [wrapper] apfmon messages muted
[2025-10-13 02:32:57] 2025-10-13 00:32:57,200 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:32:57] 2025-10-13 00:32:57,203 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:32:57]  *** Error codes and diagnostics ***
[2025-10-13 02:32:57]     "exeErrorCode": 0,
[2025-10-13 02:32:57]     "exeErrorDiag": "",
[2025-10-13 02:32:57]     "pilotErrorCode": 0,
[2025-10-13 02:32:57]     "pilotErrorDiag": "",
[2025-10-13 02:32:57]  *** Listing of results directory ***
[2025-10-13 02:32:57] total 408092
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:18 pilot3.tar.gz
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:20 queuedata.json
[2025-10-13 02:32:57] -rwx------ 1 boinc boinc     36292 Oct 12 05:21 runpilot2-wrapper.sh
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:32:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:38 run_atlas
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:38 job.xml
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc      6665 Oct 13 01:38 init_data.xml
[2025-10-13 02:32:57] -rw-r--r-- 2 boinc boinc 221673440 Oct 13 01:38 EVNT.46676267._003218.pool.root.1
[2025-10-13 02:32:57] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:38 start_atlas.sh
[2025-10-13 02:32:57] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:38 shared
[2025-10-13 02:32:57] -rw-r--r-- 2 boinc boinc    569681 Oct 13 01:38 input.tar.gz
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:38 boinc_lockfile
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc      2550 Oct 13 01:38 pandaJob.out
[2025-10-13 02:32:57] -rw------- 1 boinc boinc    975603 Oct 13 01:38 agis_schedconf.cvmfs.json
[2025-10-13 02:32:57] -rw------- 1 boinc boinc   1560580 Oct 13 01:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:32:57] drwx------ 5 boinc boinc      4096 Oct 13 01:38 pilot3
[2025-10-13 02:32:57] -rw------- 1 boinc boinc 190629577 Oct 13 02:31 HITS.46676269._070085.pool.root.1
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc       529 Oct 13 02:31 boinc_task_state.xml
[2025-10-13 02:32:57] -rw------- 1 boinc boinc      1022 Oct 13 02:32 memory_monitor_summary.json
[2025-10-13 02:32:57] -rw------- 1 boinc boinc    353430 Oct 13 02:32 log.46676269._070085.job.log.tgz.1
[2025-10-13 02:32:57] -rw------- 1 boinc boinc      7780 Oct 13 02:32 heartbeat.json
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc        27 Oct 13 02:32 wrapper_checkpoint.txt
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc      8192 Oct 13 02:32 boinc_mmap_file
[2025-10-13 02:32:57] -rw------- 1 boinc boinc        95 Oct 13 02:32 pilot_heartbeat.json
[2025-10-13 02:32:57] -rw------- 1 boinc boinc       822 Oct 13 02:32 pilotlog.txt
[2025-10-13 02:32:57] -rw------- 1 boinc boinc    485408 Oct 13 02:32 log.46676269._070085.job.log.1
[2025-10-13 02:32:57] -rw------- 1 boinc boinc       357 Oct 13 02:32 output.list
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:32 runtime_log
[2025-10-13 02:32:57] -rw------- 1 boinc boinc    860160 Oct 13 02:32 result.tar.gz
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc      8764 Oct 13 02:32 runtime_log.err
[2025-10-13 02:32:57] -rw------- 1 boinc boinc       663 Oct 13 02:32 992KDmHp1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQTiNDmdfWIvn.diag
[2025-10-13 02:32:57] -rw-r--r-- 1 boinc boinc     22164 Oct 13 02:32 stderr.txt
[2025-10-13 02:32:57] HITS file was successfully produced:
[2025-10-13 02:32:57] -rw------- 1 boinc boinc 190629577 Oct 13 02:31 shared/HITS.pool.root.1
[2025-10-13 02:32:57]  *** Contents of shared directory: ***
[2025-10-13 02:32:57] total 404068
[2025-10-13 02:32:57] -rw-r--r-- 2 boinc boinc 221673440 Oct 13 01:38 ATLAS.root_0
[2025-10-13 02:32:57] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:38 start_atlas.sh
[2025-10-13 02:32:57] -rw-r--r-- 2 boinc boinc    569681 Oct 13 01:38 input.tar.gz
[2025-10-13 02:32:57] -rw------- 1 boinc boinc 190629577 Oct 13 02:31 HITS.pool.root.1
[2025-10-13 02:32:57] -rw------- 1 boinc boinc    860160 Oct 13 02:32 result.tar.gz
02:32:59 (2485873): run_atlas exited; CPU time 32988.688936
02:32:59 (2485873): called boinc_finish(0)

</stderr_txt>
]]>

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