Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:47:23 (5570): wrapper (7.7.26015): starting
15:47:23 (5570): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 15:47:23] Arguments: --nthreads 12
[2025-10-12 15:47:23] Threads: 12
[2025-10-12 15:47:23] Checking for CVMFS
[2025-10-12 15:47:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:47:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:47:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:47:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:47:23] 2.11.2.0 2925 223321 97296 151635 3 56 11658948 20275201 1 130560 1 108698442 99.985 12907602 12183 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:47:23] CVMFS is ok
[2025-10-12 15:47:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:47:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:47:23] Further information can be found at the LHC@home message board.
[2025-10-12 15:47:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:47:23] Checking for apptainer binary...
[2025-10-12 15:47:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:47:23] Running /usr/bin/apptainer --version
[2025-10-12 15:47:23] apptainer version 1.3.2-1.el7
[2025-10-12 15:47:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:47:24] c-205-10.aglt2.org
[2025-10-12 15:47:24] apptainer works
[2025-10-12 15:47:25] Set ATHENA_PROC_NUMBER=12
[2025-10-12 15:47:25] Set ATHENA_CORE_NUMBER=12
[2025-10-12 15:47:25] Starting ATLAS job with PandaID=6840536034
[2025-10-12 15:47:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:03:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:03:52]  status=None
[2025-10-12 17:03:52]  status_code=0
[2025-10-12 17:03:52]  storage_token=
[2025-10-12 17:03:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840536034/log.46676269._086089.job.log.tgz.1
[2025-10-12 17:03:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/e8/log.46676269._086089.job.log.tgz.1
[2025-10-12 17:03:52]  workdir=None
[2025-10-12 17:03:52] ]
[2025-10-12 17:03:52] 2025-10-12 21:02:59,121 | INFO     | transferring file log.46676269._086089.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840536034/log.46676269._086089.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 17:03:52] 2025-10-12 21:02:59,122 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840536034/log.46676269._086089.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._086089.job
[2025-10-12 17:03:52] 2025-10-12 21:02:59,145 | INFO     | adding to output.list: log.46676269._086089.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/e8/log.46676269._086089.job.log.tg
[2025-10-12 17:03:52] 2025-10-12 21:02:59,147 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:03:52] 2025-10-12 21:02:59,147 | INFO     | summary of transferred files:
[2025-10-12 17:03:52] 2025-10-12 21:02:59,147 | INFO     |  -- lfn=log.46676269._086089.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:03:52] 2025-10-12 21:02:59,148 | INFO     | stage-out finished correctly
[2025-10-12 17:03:52] 2025-10-12 21:02:59,299 | INFO     | number of running child processes to parent process 16052: 1
[2025-10-12 17:03:52] 2025-10-12 21:02:59,299 | INFO     | maximum number of monitored processes: 6
[2025-10-12 17:03:52] 2025-10-12 21:03:01,026 | INFO     | time since job start (4521s) is within the limit (172800.0s)
[2025-10-12 17:03:52] 2025-10-12 21:03:01,291 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:03:52] 2025-10-12 21:03:01,807 | INFO     | monitor loop #338: job 0:6840536034 is in state 'finished'
[2025-10-12 17:03:52] 2025-10-12 21:03:01,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:03:52] 2025-10-12 21:03:02,463 | INFO     | job 6840536034 has state=finished
[2025-10-12 17:03:52] 2025-10-12 21:03:02,463 | INFO     | preparing for final server update for job 6840536034 in state='finished'
[2025-10-12 17:03:52] 2025-10-12 21:03:02,464 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:03:52] 2025-10-12 21:03:02,464 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:03:52] 2025-10-12 21:03:02,464 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:03:52] 2025-10-12 21:03:02,465 | INFO     | job 6840536034 has finished - writing final server update
[2025-10-12 17:03:52] 2025-10-12 21:03:02,465 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:03:52] 2025-10-12 21:03:02,466 | INFO     | executing command: lscpu
[2025-10-12 17:03:52] 2025-10-12 21:03:02,491 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:03:52] 2025-10-12 21:03:03,032 | INFO     | time since job start (4523s) is within the limit (172800.0s)
[2025-10-12 17:03:52] 2025-10-12 21:03:04,311 | INFO     | monitor loop #339: job 0:6840536034 is in state 'finished'
[2025-10-12 17:03:52] 2025-10-12 21:03:04,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:03:52] 2025-10-12 21:03:05,037 | INFO     | time since job start (4525s) is within the limit (172800.0s)
[2025-10-12 17:03:52] 2025-10-12 21:03:06,156 | INFO     | PID=9242 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 17:03:52] 2025-10-12 21:03:06,812 | INFO     | monitor loop #340: job 0:6840536034 is in state 'finished'
[2025-10-12 17:03:52] 2025-10-12 21:03:06,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:03:52] 2025-10-12 21:03:07,156 | INFO     | time since job start (4527s) is within the limit (172800.0s)
[2025-10-12 17:03:52] 2025-10-12 21:03:08,250 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:03:52] 2025-10-12 21:03:08,254 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 17:03:52] 2025-10-12 21:03:08,256 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840536034/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:03:52] 2025-10-12 21:03:08,257 | INFO     | extracted standard info from prmon json
[2025-10-12 17:03:52] 2025-10-12 21:03:08,257 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:03:52] 2025-10-12 21:03:08,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:03:52] 2025-10-12 21:03:08,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:03:52] 2025-10-12 21:03:08,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:03:52] 2025-10-12 21:03:08,259 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:03:52] 2025-10-12 21:03:08,260 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 17:03:52] 2025-10-12 21:03:08,260 | INFO     | sum of deviations: -6494517988.000007
[2025-10-12 17:03:52] 2025-10-12 21:03:08,260 | INFO     | mean x: 1760300807.0
[2025-10-12 17:03:52] 2025-10-12 21:03:08,260 | INFO     | mean y: 2765596.9104477614
[2025-10-12 17:03:52] 2025-10-12 21:03:08,260 | INFO     | -- intersect: 122613286402.85649
[2025-10-12 17:03:52] 2025-10-12 21:03:08,260 | INFO     | intersect: 122613286402.85649
[2025-10-12 17:03:52] 2025-10-12 21:03:08,261 | INFO     | chi2: 0.08313905687031045
[2025-10-12 17:03:52] 2025-10-12 21:03:08,261 | INFO     | -- intersect: 122613286402.85649
[2025-10-12 17:03:52] 2025-10-12 21:03:08,261 | INFO     | current memory leak: -69.65 B/s (using 67 data points, chi2=0.08)
[2025-10-12 17:03:52] 2025-10-12 21:03:08,261 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-10-12 17:03:52] 2025-10-12 21:03:08,261 | INFO     | ..............................
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . Timing measurements:
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . get job = 0 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . initial setup = 2 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . payload setup = 7 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . stage-in = 0 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . payload execution = 4489 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . stage-out = 0 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | . log creation = 0 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,262 | INFO     | ..............................
[2025-10-12 17:03:52] 2025-10-12 21:03:08,348 | INFO     | 
[2025-10-12 17:03:52] 2025-10-12 21:03:08,348 | INFO     | job summary report
[2025-10-12 17:03:52] 2025-10-12 21:03:08,348 | INFO     | --------------------------------------------------
[2025-10-12 17:03:52] 2025-10-12 21:03:08,349 | INFO     | PanDA job id: 6840536034
[2025-10-12 17:03:52] 2025-10-12 21:03:08,349 | INFO     | task id: 46676269
[2025-10-12 17:03:52] 2025-10-12 21:03:08,349 | INFO     | errors: (none)
[2025-10-12 17:03:52] 2025-10-12 21:03:08,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:03:52] 2025-10-12 21:03:08,349 | INFO     | pilot state: finished 
[2025-10-12 17:03:52] 2025-10-12 21:03:08,349 | INFO     | transexitcode: 0
[2025-10-12 17:03:52] 2025-10-12 21:03:08,349 | INFO     | exeerrorcode: 0
[2025-10-12 17:03:52] 2025-10-12 21:03:08,350 | INFO     | exeerrordiag: 
[2025-10-12 17:03:52] 2025-10-12 21:03:08,350 | INFO     | exitcode: 0
[2025-10-12 17:03:52] 2025-10-12 21:03:08,350 | INFO     | exitmsg: OK
[2025-10-12 17:03:52] 2025-10-12 21:03:08,350 | INFO     | cpuconsumptiontime: 47484 s
[2025-10-12 17:03:52] 2025-10-12 21:03:08,350 | INFO     | nevents: 400
[2025-10-12 17:03:52] 2025-10-12 21:03:08,350 | INFO     | neventsw: 0
[2025-10-12 17:03:52] 2025-10-12 21:03:08,351 | INFO     | pid: 16052
[2025-10-12 17:03:52] 2025-10-12 21:03:08,351 | INFO     | pgrp: 16052
[2025-10-12 17:03:52] 2025-10-12 21:03:08,351 | INFO     | corecount: 12
[2025-10-12 17:03:52] 2025-10-12 21:03:08,351 | INFO     | event service: False
[2025-10-12 17:03:52] 2025-10-12 21:03:08,351 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4500: 2375280, 4502: 2384278, 4504: 2384334, 4511: 2384656}
[2025-10-12 17:03:52] 2025-10-12 21:03:08,351 | INFO     | --------------------------------------------------
[2025-10-12 17:03:52] 2025-10-12 21:03:08,352 | INFO     | 
[2025-10-12 17:03:52] 2025-10-12 21:03:08,352 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:03:52] 2025-10-12 21:03:08,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:03:52] 2025-10-12 21:03:08,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:03:52] 2025-10-12 21:03:08,380 | INFO     | job 6840536034 has completed (purged errors)
[2025-10-12 17:03:52] 2025-10-12 21:03:08,380 | INFO     | overall cleanup function is called
[2025-10-12 17:03:52] 2025-10-12 21:03:09,389 | INFO     | --- collectZombieJob: --- 10, [16052]
[2025-10-12 17:03:52] 2025-10-12 21:03:09,389 | INFO     | zombie collector waiting for pid 16052
[2025-10-12 17:03:52] 2025-10-12 21:03:09,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:03:52] 2025-10-12 21:03:09,394 | INFO     | collected zombie processes
[2025-10-12 17:03:52] 2025-10-12 21:03:09,394 | INFO     | will attempt to kill all subprocesses of pid=16052
[2025-10-12 17:03:52] 2025-10-12 21:03:09,487 | INFO     | process IDs to be killed: [16052] (in reverse order)
[2025-10-12 17:03:52] 2025-10-12 21:03:09,538 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:03:52] 2025-10-12 21:03:09,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:03:52] 2025-10-12 21:03:09,541 | INFO     | did not find any defunct processes belonging to 16052
[2025-10-12 17:03:52] 2025-10-12 21:03:09,544 | INFO     | did not find any defunct processes belonging to 16052
[2025-10-12 17:03:52] 2025-10-12 21:03:09,544 | INFO     | ready for new job
[2025-10-12 17:03:52] 2025-10-12 21:03:09,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:03:52] 2025-10-12 21:03:09,546 | INFO     | ***************************************
[2025-10-12 17:03:52] 2025-10-12 21:03:09,547 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:03:52] 2025-10-12 21:03:09,547 | INFO     | ***************************************
[2025-10-12 17:03:52] 2025-10-12 21:03:09,547 | INFO     | 
[2025-10-12 17:03:52] 2025-10-12 21:03:09,547 | INFO     | architecture information:
[2025-10-12 17:03:52] 2025-10-12 21:03:09,548 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:03:52] 2025-10-12 21:03:09,562 | INFO     | cat /etc/os-release:
[2025-10-12 17:03:52] NAME="CentOS Linux"
[2025-10-12 17:03:52] VERSION="7 (Core)"
[2025-10-12 17:03:52] ID="centos"
[2025-10-12 17:03:52] ID_LIKE="rhel fedora"
[2025-10-12 17:03:52] VERSION_ID="7"
[2025-10-12 17:03:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:03:52] ANSI_COLOR="0;31"
[2025-10-12 17:03:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:03:52] HOME_URL="https://www.centos.org/"
[2025-10-12 17:03:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:03:52] 
[2025-10-12 17:03:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:03:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:03:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:03:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:03:52] 
[2025-10-12 17:03:52] 2025-10-12 21:03:09,562 | INFO     | ***************************************
[2025-10-12 17:03:52] 2025-10-12 21:03:10,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:03:52] 2025-10-12 21:03:10,082 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-12 17:03:52] 2025-10-12 21:03:10,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:03:52] 2025-10-12 21:03:10,083 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:03:52] 2025-10-12 21:03:10,083 | INFO     | update_server=False
[2025-10-12 17:03:52] 2025-10-12 21:03:10,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:03:52] 2025-10-12 21:03:10,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:03:52] 2025-10-12 21:03:10,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:03:52] 2025-10-12 21:03:10,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:03:52] 2025-10-12 21:03:10,318 | INFO     | aborting loop
[2025-10-12 17:03:52] 2025-10-12 21:03:10,370 | INFO     | all job control threads have been joined
[2025-10-12 17:03:52] 2025-10-12 21:03:10,527 | INFO     | all payload control threads have been joined
[2025-10-12 17:03:52] 2025-10-12 21:03:10,882 | INFO     | all data control threads have been joined
[2025-10-12 17:03:52] 2025-10-12 21:03:11,089 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,089 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,319 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,375 | INFO     | [job] control thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,532 | INFO     | [payload] control thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,642 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,650 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,652 | INFO     | [job] validate thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:03:52] 2025-10-12 21:03:11,887 | INFO     | [data] control thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,991 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:11,993 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:12,089 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:12,512 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:12,629 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:15,890 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:03:52] 2025-10-12 21:03:40,354 | INFO     | PID=9242 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 17:03:52] 2025-10-12 21:03:40,355 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:03:52] 2025-10-12 21:03:40,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:03:52] 2025-10-12 21:03:40,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:03:52] 2025-10-12 21:03:47,145 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:03:52] 2025-10-12 21:03:47,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183289333568)>', '<ExcThread(monitor, started 140182565156608)>']
[2025-10-12 17:03:52] 2025-10-12 21:03:47,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:03:52] 2025-10-12 21:03:47,390 | INFO     | [monitor] control thread has ended
[2025-10-12 17:03:52] 2025-10-12 21:03:52,161 | INFO     | all workflow threads have been joined
[2025-10-12 17:03:52] 2025-10-12 21:03:52,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:03:52] 2025-10-12 21:03:52,169 | INFO     | traces error code: 0
[2025-10-12 17:03:52] 2025-10-12 21:03:52,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:03:52] 2025-10-12 21:03:52,269 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:03:52] 2025-10-12 21:03:52,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:03:52] 2025-10-12 21:03:52,276 [wrapper] pilotpid: 9242
[2025-10-12 17:03:52] 2025-10-12 21:03:52,280 [wrapper] Pilot exit status: 0
[2025-10-12 17:03:52] 2025-10-12 21:03:52,296 [wrapper] pandaids: 6840536034
[2025-10-12 17:03:52] 2025-10-12 21:03:52,343 [wrapper] cleanup supervisor_pilot 27816 9243
[2025-10-12 17:03:52] 2025-10-12 21:03:52,348 [wrapper] Test setup, not cleaning
[2025-10-12 17:03:52] 2025-10-12 21:03:52,352 [wrapper] apfmon messages muted
[2025-10-12 17:03:52] 2025-10-12 21:03:52,356 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:03:52] 2025-10-12 21:03:52,360 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:03:52]  *** Error codes and diagnostics ***
[2025-10-12 17:03:52]     "exeErrorCode": 0,
[2025-10-12 17:03:52]     "exeErrorDiag": "",
[2025-10-12 17:03:52]     "pilotErrorCode": 0,
[2025-10-12 17:03:52]     "pilotErrorDiag": "",
[2025-10-12 17:03:52]  *** Listing of results directory ***
[2025-10-12 17:03:52] total 415688
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:22 queuedata.json
[2025-10-12 17:03:52] -rwx------ 1 boincer umatlas     36292 Oct 12 14:23 runpilot2-wrapper.sh
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:03:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:47 run_atlas
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:47 job.xml
[2025-10-12 17:03:52] -rw-r--r-- 2 boincer umatlas 222923434 Oct 12 15:47 EVNT.46676267._004403.pool.root.1
[2025-10-12 17:03:52] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 15:47 input.tar.gz
[2025-10-12 17:03:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:47 start_atlas.sh
[2025-10-12 17:03:52] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:47 shared
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:47 boinc_lockfile
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:47 pandaJob.out
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas    975536 Oct 12 15:47 agis_schedconf.cvmfs.json
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas   1560580 Oct 12 15:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:03:52] drwx------ 5 boincer umatlas      4096 Oct 12 15:47 pilot3
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 17:01 init_data.xml
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas 196741429 Oct 12 17:02 HITS.46676269._086089.pool.root.1
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas      1050 Oct 12 17:02 memory_monitor_summary.json
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas    389765 Oct 12 17:02 log.46676269._086089.job.log.tgz.1
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:03 boinc_task_state.xml
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas      7858 Oct 12 17:03 heartbeat.json
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas        95 Oct 12 17:03 pilot_heartbeat.json
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:03 boinc_mmap_file
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:03 wrapper_checkpoint.txt
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas      4745 Oct 12 17:03 pilotlog.txt
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas    657678 Oct 12 17:03 log.46676269._086089.job.log.1
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas       357 Oct 12 17:03 output.list
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:03 runtime_log
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas   1064960 Oct 12 17:03 result.tar.gz
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 17:03 runtime_log.err
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas       659 Oct 12 17:03 F2PKDmEuFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv2kNDmE6Hm9n.diag
[2025-10-12 17:03:52] -rw-r--r-- 1 boincer umatlas     22077 Oct 12 17:03 stderr.txt
[2025-10-12 17:03:52] HITS file was successfully produced:
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas 196741429 Oct 12 17:02 shared/HITS.pool.root.1
[2025-10-12 17:03:52]  *** Contents of shared directory: ***
[2025-10-12 17:03:52] total 411456
[2025-10-12 17:03:52] -rw-r--r-- 2 boincer umatlas 222923434 Oct 12 15:47 ATLAS.root_0
[2025-10-12 17:03:52] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 15:47 input.tar.gz
[2025-10-12 17:03:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:47 start_atlas.sh
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas 196741429 Oct 12 17:02 HITS.pool.root.1
[2025-10-12 17:03:52] -rw------- 1 boincer umatlas   1064960 Oct 12 17:03 result.tar.gz
17:03:54 (5570): run_atlas exited; CPU time 47404.870669
17:03:54 (5570): called boinc_finish(0)

</stderr_txt>
]]>

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