Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:22:35 (2975139): wrapper (7.7.26015): starting
13:22:35 (2975139): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 13:22:35] Arguments: --nthreads 12
[2025-10-12 13:22:35] Threads: 12
[2025-10-12 13:22:35] Checking for CVMFS
[2025-10-12 13:22:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:22:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:22:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:22:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:22:36] 2.11.5.0 2129 32651 233724 151636 3 207 42077292 45568000 16387 130560 0 327219582 99.841 150479974 25229 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 13:22:36] CVMFS is ok
[2025-10-12 13:22:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:22:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:22:36] Further information can be found at the LHC@home message board.
[2025-10-12 13:22:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:22:36] Checking for apptainer binary...
[2025-10-12 13:22:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:22:36] Running /usr/bin/apptainer --version
[2025-10-12 13:22:36] apptainer version 1.4.1-1.el9
[2025-10-12 13:22:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:22:36] wns0037.triumf.lcg
[2025-10-12 13:22:36] apptainer works
[2025-10-12 13:22:36] Set ATHENA_PROC_NUMBER=12
[2025-10-12 13:22:36] Set ATHENA_CORE_NUMBER=12
[2025-10-12 13:22:36] Starting ATLAS job with PandaID=6840223788
[2025-10-12 13:22:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:28:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:28:39] 2025-10-12 20:28:07,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:28:39] 2025-10-12 20:28:07,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | WARNING  | wrong length of table data, x=[1760300711.0], y=[1281.0] (must be same and length>=4)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | INFO     | could have reported an average CPU frequency of 2473 MHz (4 samples)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | ..............................
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . Timing measurements:
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . get job = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . initial setup = 4 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . payload setup = 36 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . stage-in = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . payload execution = 49 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . stage-out = 1 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . log creation = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | ..............................
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840223788/pilotlog.txt
[2025-10-12 13:28:39] 2025-10-12 20:28:07,232 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 13:28:39] - Log from pilotlog.txt -
[2025-10-12 13:28:39] 2025-10-12 20:28:07,192 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840223788/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,193 | INFO     | extracted standard info from prmon json
[2025-10-12 13:28:39] 2025-10-12 20:28:07,193 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:28:39] 2025-10-12 20:28:07,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:28:39] 2025-10-12 20:28:07,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | WARNING  | wrong length of table data, x=[1760300711.0], y=[1281.0] (must be same and length>=4)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | INFO     | could have reported an average CPU frequency of 2473 MHz (4 samples)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | ..............................
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . Timing measurements:
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . get job = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . initial setup = 4 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . payload setup = 36 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . stage-in = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . payload execution = 49 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . stage-out = 1 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . log creation = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | ..............................
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840223788/pilotlog.txt
[2025-10-12 13:28:39] 2025-10-12 20:28:07,232 | WARNING  | 
[2025-10-12 13:28:39] [begin log extracts]
[2025-10-12 13:28:39] - Log from pilotlog.txt -
[2025-10-12 13:28:39] 2025-10-12 20:28:07,192 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840223788/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,193 | INFO     | extracted standard info from prmon json
[2025-10-12 13:28:39] 2025-10-12 20:28:07,193 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:28:39] 2025-10-12 20:28:07,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:28:39] 2025-10-12 20:28:07,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | WARNING  | wrong length of table data, x=[1760300711.0], y=[1281.0] (must be same and length>=4)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,202 | INFO     | could have reported an average CPU frequency of 2473 MHz (4 samples)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | ..............................
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . Timing measurements:
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . get job = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . initial setup = 4 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . payload setup = 36 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . stage-in = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . payload execution = 49 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . stage-out = 1 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | . log creation = 0 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | ..............................
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 13:28:39] 2025-10-12 20:28:07,203 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840223788/pilotlog.txt
[2025-10-12 13:28:39] [end log extracts]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,233 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,233 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 13:28:39] 2025-10-12 20:28:07,467 | INFO     | 
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | job summary report
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | --------------------------------------------------
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | PanDA job id: 6840223788
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | task id: 46676269
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 13:25:30,997 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | pilot state: failed 
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | transexitcode: 65
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | exeerrorcode: 65
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | exitcode: 65
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | nevents: 0
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | neventsw: 0
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | pid: 2985673
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | pgrp: 2985673
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | corecount: 12
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | event service: False
[2025-10-12 13:28:39] 2025-10-12 20:28:07,468 | INFO     | sizes: {0: 2348029, 1: 2348882, 2: 2348882, 13: 2348910, 25: 2348966, 30: 2349256, 35: 2349412, 90: 2372646, 92: 2376938, 94: 2376966, 236: 2377132}
[2025-10-12 13:28:39] 2025-10-12 20:28:07,469 | INFO     | --------------------------------------------------
[2025-10-12 13:28:39] 2025-10-12 20:28:07,469 | INFO     | 
[2025-10-12 13:28:39] 2025-10-12 20:28:07,469 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 13:28:39] 2025-10-12 20:28:07,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,486 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:28:39] 2025-10-12 20:28:07,486 | INFO     | job 6840223788 has completed (purged errors)
[2025-10-12 13:28:39] 2025-10-12 20:28:07,486 | INFO     | overall cleanup function is called
[2025-10-12 13:28:39] 2025-10-12 20:28:08,492 | INFO     | --- collectZombieJob: --- 10, [2985673]
[2025-10-12 13:28:39] 2025-10-12 20:28:08,492 | INFO     | zombie collector waiting for pid 2985673
[2025-10-12 13:28:39] 2025-10-12 20:28:08,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:28:39] 2025-10-12 20:28:08,492 | INFO     | collected zombie processes
[2025-10-12 13:28:39] 2025-10-12 20:28:08,492 | INFO     | will attempt to kill all subprocesses of pid=2985673
[2025-10-12 13:28:39] 2025-10-12 20:28:08,746 | INFO     | process IDs to be killed: [2985673] (in reverse order)
[2025-10-12 13:28:39] 2025-10-12 20:28:08,829 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:28:39] 2025-10-12 20:28:08,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:28:39] 2025-10-12 20:28:08,841 | INFO     | did not find any defunct processes belonging to 2985673
[2025-10-12 13:28:39] 2025-10-12 20:28:08,862 | INFO     | did not find any defunct processes belonging to 2985673
[2025-10-12 13:28:39] 2025-10-12 20:28:08,863 | INFO     | ready for new job
[2025-10-12 13:28:39] 2025-10-12 20:28:08,863 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:28:39] 2025-10-12 20:28:08,867 | INFO     | ***************************************
[2025-10-12 13:28:39] 2025-10-12 20:28:08,867 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:28:39] 2025-10-12 20:28:08,867 | INFO     | ***************************************
[2025-10-12 13:28:39] 2025-10-12 20:28:08,867 | INFO     | 
[2025-10-12 13:28:39] 2025-10-12 20:28:08,869 | INFO     | architecture information:
[2025-10-12 13:28:39] 2025-10-12 20:28:08,869 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:28:39] 2025-10-12 20:28:08,889 | INFO     | cat /etc/os-release:
[2025-10-12 13:28:39] NAME="CentOS Linux"
[2025-10-12 13:28:39] VERSION="7 (Core)"
[2025-10-12 13:28:39] ID="centos"
[2025-10-12 13:28:39] ID_LIKE="rhel fedora"
[2025-10-12 13:28:39] VERSION_ID="7"
[2025-10-12 13:28:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:28:39] ANSI_COLOR="0;31"
[2025-10-12 13:28:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:28:39] HOME_URL="https://www.centos.org/"
[2025-10-12 13:28:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:28:39] 
[2025-10-12 13:28:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:28:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:28:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:28:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:28:39] 
[2025-10-12 13:28:39] 2025-10-12 20:28:08,889 | INFO     | ***************************************
[2025-10-12 13:28:39] 2025-10-12 20:28:09,393 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 13:28:39] 2025-10-12 20:28:09,407 | INFO     | sufficient remaining disk space (1984922910720 B)
[2025-10-12 13:28:39] 2025-10-12 20:28:09,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:28:39] 2025-10-12 20:28:09,408 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:28:39] 2025-10-12 20:28:09,408 | INFO     | update_server=False
[2025-10-12 13:28:39] 2025-10-12 20:28:09,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:28:39] 2025-10-12 20:28:09,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:39] 2025-10-12 20:28:09,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:28:39] 2025-10-12 20:28:09,687 | INFO     | all job control threads have been joined
[2025-10-12 13:28:39] 2025-10-12 20:28:09,771 | INFO     | all data control threads have been joined
[2025-10-12 13:28:39] 2025-10-12 20:28:09,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:39] 2025-10-12 20:28:09,917 | INFO     | aborting loop
[2025-10-12 13:28:39] 2025-10-12 20:28:10,092 | INFO     | all payload control threads have been joined
[2025-10-12 13:28:39] 2025-10-12 20:28:10,414 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,415 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,430 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,623 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,694 | INFO     | [job] control thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,777 | INFO     | [data] control thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,906 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,922 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:10,946 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:11,098 | INFO     | [payload] control thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:11,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:28:39] 2025-10-12 20:28:11,435 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:11,582 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:11,608 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:11,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:11,893 | INFO     | [job] validate thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:14,210 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:28:39] 2025-10-12 20:28:15,361 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:28:39] 2025-10-12 20:28:16,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371031693120)>', '<ExcThread(monitor, started 140370637731584)>']
[2025-10-12 13:28:39] 2025-10-12 20:28:21,257 | INFO     | all workflow threads have been joined
[2025-10-12 13:28:39] 2025-10-12 20:28:21,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:28:39] 2025-10-12 20:28:21,257 | INFO     | traces error code: 0
[2025-10-12 13:28:39] 2025-10-12 20:28:21,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:28:39] 2025-10-12 20:28:39,094 | INFO     | PID=2978859 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:28:39] 2025-10-12 20:28:39,094 | INFO     | .. there are 28 such processes running
[2025-10-12 13:28:39] 2025-10-12 20:28:39,095 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:28:39] 2025-10-12 20:28:39,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:28:39] 2025-10-12 20:28:39,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:28:39] 2025-10-12 20:28:39,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:28:39] 2025-10-12 20:28:39,095 | INFO     | [monitor] control thread has ended
[2025-10-12 13:28:39] 2025-10-12 20:28:39,337 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:28:39] 2025-10-12 20:28:39,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:28:39] 2025-10-12 20:28:39,352 [wrapper] pilotpid: 2978859
[2025-10-12 13:28:39] 2025-10-12 20:28:39,356 [wrapper] Pilot exit status: 0
[2025-10-12 13:28:39] 2025-10-12 20:28:39,429 [wrapper] pandaids: 6840223788
[2025-10-12 13:28:39] 2025-10-12 20:28:39,591 [wrapper] cleanup supervisor_pilot 2978865 2978860
[2025-10-12 13:28:39] 2025-10-12 20:28:39,608 [wrapper] Test setup, not cleaning
[2025-10-12 13:28:39] 2025-10-12 20:28:39,636 [wrapper] apfmon messages muted
[2025-10-12 13:28:39] 2025-10-12 20:28:39,659 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:28:39] 2025-10-12 20:28:39,669 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:28:39]  *** Error codes and diagnostics ***
[2025-10-12 13:28:39]     "exeErrorCode": 65,
[2025-10-12 13:28:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 13:28:39]     "pilotErrorCode": 1305,
[2025-10-12 13:28:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 13:28:39]  *** Listing of results directory ***
[2025-10-12 13:28:39] total 218832
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:00 pilot3.tar.gz
[2025-10-12 13:28:39] -rwx------. 1 boinc boinc     36292 Oct 12 08:15 runpilot2-wrapper.sh
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:15 queuedata.json
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc       100 Oct 12 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:28:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 13:22 run_atlas
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc       105 Oct 12 13:22 job.xml
[2025-10-12 13:28:39] -rw-r--r--. 2 boinc boinc 219948169 Oct 12 13:22 EVNT.46676267._004558.pool.root.1
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc      6594 Oct 12 13:22 init_data.xml
[2025-10-12 13:28:39] -rw-r--r--. 2 boinc boinc     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 13:28:39] drwxrwx--x. 2 boinc boinc      4096 Oct 12 13:22 shared
[2025-10-12 13:28:39] -rw-r--r--. 2 boinc boinc    569677 Oct 12 13:22 input.tar.gz
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc         0 Oct 12 13:22 boinc_lockfile
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc      2550 Oct 12 13:22 pandaJob.out
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc    975536 Oct 12 13:23 agis_schedconf.cvmfs.json
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc   1560580 Oct 12 13:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:28:39] drwx------. 5 boinc boinc      4096 Oct 12 13:23 pilot3
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc       523 Oct 12 13:25 boinc_task_state.xml
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc       950 Oct 12 13:25 memory_monitor_summary.json
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc     22262 Oct 12 13:25 log.46676269._081892.job.log.tgz.1
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc      8397 Oct 12 13:28 heartbeat.json
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc        22 Oct 12 13:28 wrapper_checkpoint.txt
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc      8192 Oct 12 13:28 boinc_mmap_file
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc        95 Oct 12 13:28 pilot_heartbeat.json
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc       823 Oct 12 13:28 pilotlog.txt
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc     95968 Oct 12 13:28 log.46676269._081892.job.log.1
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc       188 Oct 12 13:28 output.list
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc       620 Oct 12 13:28 runtime_log
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc    133120 Oct 12 13:28 result.tar.gz
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc      8528 Oct 12 13:28 runtime_log.err
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc       644 Oct 12 13:28 41QKDmMyCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoEUMDmJD9sAn.diag
[2025-10-12 13:28:39] -rw-r--r--. 1 boinc boinc     21828 Oct 12 13:28 stderr.txt
[2025-10-12 13:28:39] No HITS result produced
[2025-10-12 13:28:39]  *** Contents of shared directory: ***
[2025-10-12 13:28:39] total 215508
[2025-10-12 13:28:39] -rw-r--r--. 2 boinc boinc 219948169 Oct 12 13:22 ATLAS.root_0
[2025-10-12 13:28:39] -rw-r--r--. 2 boinc boinc     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 13:28:39] -rw-r--r--. 2 boinc boinc    569677 Oct 12 13:22 input.tar.gz
[2025-10-12 13:28:39] -rw-------. 1 boinc boinc    133120 Oct 12 13:28 result.tar.gz
13:28:41 (2975139): run_atlas exited; CPU time 30.073753
13:28:41 (2975139): called boinc_finish(0)

</stderr_txt>
]]>

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