Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:58:48 (137492): wrapper (7.7.26015): starting
01:58:48 (137492): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 01:58:48] Arguments: --nthreads 12
[2025-10-13 01:58:48] Threads: 12
[2025-10-13 01:58:48] Checking for CVMFS
[2025-10-13 01:58:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:58:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:58:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:58:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:58:48] 2.13.2.0 97741 28 45100 151643 3 188 2439818 4096000 94 130560 0 111089 99.998 1363 727 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 01:58:48] CVMFS is ok
[2025-10-13 01:58:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:58:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:58:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 01:58:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 01:58:48] Further information can be found at the LHC@home message board.
[2025-10-13 01:58:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:58:48] Checking for apptainer binary...
[2025-10-13 01:58:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:58:48] Running /usr/bin/apptainer --version
[2025-10-13 01:58:48] apptainer version 1.4.3
[2025-10-13 01:58:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:58:48] test-run
[2025-10-13 01:58:48] apptainer works
[2025-10-13 01:58:48] Set ATHENA_PROC_NUMBER=12
[2025-10-13 01:58:48] Set ATHENA_CORE_NUMBER=12
[2025-10-13 01:58:48] Starting ATLAS job with PandaID=6840390556
[2025-10-13 01:58:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:27:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:27:43]  protocol_id=None
[2025-10-13 02:27:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 02:27:43]  replicas=None
[2025-10-13 02:27:43]  scope=mc23_13p6TeV
[2025-10-13 02:27:43]  status=None
[2025-10-13 02:27:43]  status_code=0
[2025-10-13 02:27:43]  storage_token=
[2025-10-13 02:27:43]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6840390556/log.46676269._083388.job.log.tgz.1
[2025-10-13 02:27:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/3b/log.46676269._083388.job.log.tgz.1
[2025-10-13 02:27:43]  workdir=None
[2025-10-13 02:27:43] ]
[2025-10-13 02:27:43] 2025-10-13 02:26:44,257 | INFO     | transferring file log.46676269._083388.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6840390556/log.46676269._083388.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 02:27:43] 2025-10-13 02:26:44,258 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6840390556/log.46676269._083388.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-13 02:27:43] 2025-10-13 02:26:44,263 | INFO     | adding to output.list: log.46676269._083388.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/3b/log.46676269._083388.job.log.tg
[2025-10-13 02:27:43] 2025-10-13 02:26:44,264 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 02:27:43] 2025-10-13 02:26:44,264 | INFO     | summary of transferred files:
[2025-10-13 02:27:43] 2025-10-13 02:26:44,264 | INFO     |  -- lfn=log.46676269._083388.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 02:27:43] 2025-10-13 02:26:44,264 | INFO     | stage-out finished correctly
[2025-10-13 02:27:43] 2025-10-13 02:26:45,397 | INFO     | time since job start (1672s) is within the limit (172800.0s)
[2025-10-13 02:27:43] 2025-10-13 02:26:46,115 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 02:27:43] 2025-10-13 02:26:46,147 | INFO     | job 6840390556 has state=finished
[2025-10-13 02:27:43] 2025-10-13 02:26:46,147 | INFO     | preparing for final server update for job 6840390556 in state='finished'
[2025-10-13 02:27:43] 2025-10-13 02:26:46,147 | INFO     | this job has now completed (state=finished)
[2025-10-13 02:27:43] 2025-10-13 02:26:46,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 02:27:43] 2025-10-13 02:26:46,147 | INFO     | log transfer has been attempted: DONE
[2025-10-13 02:27:43] 2025-10-13 02:26:46,147 | INFO     | job 6840390556 has finished - writing final server update
[2025-10-13 02:27:43] 2025-10-13 02:26:46,148 | INFO     | total number of processed events: 400 (read)
[2025-10-13 02:27:43] 2025-10-13 02:26:46,149 | INFO     | executing command: lscpu
[2025-10-13 02:27:43] 2025-10-13 02:26:46,155 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 02:27:43] 2025-10-13 02:26:47,399 | INFO     | time since job start (1674s) is within the limit (172800.0s)
[2025-10-13 02:27:43] 2025-10-13 02:26:49,404 | INFO     | time since job start (1676s) is within the limit (172800.0s)
[2025-10-13 02:27:43] 2025-10-13 02:26:49,925 | WARNING  | process 147994 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 02:27:43] 2025-10-13 02:26:49,925 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6840390556/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:27:43] 2025-10-13 02:26:49,939 | INFO     | number of running child processes to parent process 147994: 1
[2025-10-13 02:27:43] 2025-10-13 02:26:49,939 | INFO     | maximum number of monitored processes: 6
[2025-10-13 02:27:43] 2025-10-13 02:26:50,025 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 02:27:43] 2025-10-13 02:26:50,026 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.979999999998
[2025-10-13 02:27:43] 2025-10-13 02:26:50,028 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6840390556/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:27:43] 2025-10-13 02:26:50,028 | INFO     | extracted standard info from prmon json
[2025-10-13 02:27:43] 2025-10-13 02:26:50,028 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:27:43] 2025-10-13 02:26:50,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:27:43] 2025-10-13 02:26:50,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:27:43] 2025-10-13 02:26:50,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | sum of square deviations: 2865170.0
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | sum of deviations: -62881849.99999999
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | mean x: 1760321662.0
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | mean y: 2700627.3333333335
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | -- intersect: 38636458031.47853
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | intersect: 38636458031.47853
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | chi2: 0.0049776734144616
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | -- intersect: 38636458031.47853
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | current memory leak: -21.95 B/s (using 21 data points, chi2=0.00)
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | ..............................
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . Timing measurements:
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . get job = 0 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . initial setup = 2 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . payload setup = 1 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . stage-in = 0 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . payload execution = 1654 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . stage-out = 0 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | . log creation = 0 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,029 | INFO     | ..............................
[2025-10-13 02:27:43] 2025-10-13 02:26:50,101 | INFO     | 
[2025-10-13 02:27:43] 2025-10-13 02:26:50,101 | INFO     | job summary report
[2025-10-13 02:27:43] 2025-10-13 02:26:50,101 | INFO     | --------------------------------------------------
[2025-10-13 02:27:43] 2025-10-13 02:26:50,101 | INFO     | PanDA job id: 6840390556
[2025-10-13 02:27:43] 2025-10-13 02:26:50,101 | INFO     | task id: 46676269
[2025-10-13 02:27:43] 2025-10-13 02:26:50,101 | INFO     | errors: (none)
[2025-10-13 02:27:43] 2025-10-13 02:26:50,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | pilot state: finished 
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | transexitcode: 0
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | exeerrorcode: 0
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | exeerrordiag: 
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | exitcode: 0
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | exitmsg: OK
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | cpuconsumptiontime: 15361 s
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | nevents: 400
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | neventsw: 0
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | pid: 147994
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | pgrp: 147994
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | corecount: 12
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | event service: False
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | sizes: {0: 2348864, 1: 2349126, 11: 2349154, 1659: 2383019, 1661: 2383019, 1665: 2383213}
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | --------------------------------------------------
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | 
[2025-10-13 02:27:43] 2025-10-13 02:26:50,102 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:27:43] 2025-10-13 02:26:50,109 | INFO     | job 6840390556 has completed (purged errors)
[2025-10-13 02:27:43] 2025-10-13 02:26:50,109 | INFO     | overall cleanup function is called
[2025-10-13 02:27:43] 2025-10-13 02:26:51,115 | INFO     | --- collectZombieJob: --- 10, [147994]
[2025-10-13 02:27:43] 2025-10-13 02:26:51,115 | INFO     | zombie collector waiting for pid 147994
[2025-10-13 02:27:43] 2025-10-13 02:26:51,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:27:43] 2025-10-13 02:26:51,115 | INFO     | collected zombie processes
[2025-10-13 02:27:43] 2025-10-13 02:26:51,115 | INFO     | will attempt to kill all subprocesses of pid=147994
[2025-10-13 02:27:43] 2025-10-13 02:26:51,136 | INFO     | process IDs to be killed: [147994] (in reverse order)
[2025-10-13 02:27:43] 2025-10-13 02:26:51,147 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:27:43] 2025-10-13 02:26:51,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:27:43] 2025-10-13 02:26:51,148 | INFO     | did not find any defunct processes belonging to 147994
[2025-10-13 02:27:43] 2025-10-13 02:26:51,149 | INFO     | did not find any defunct processes belonging to 147994
[2025-10-13 02:27:43] 2025-10-13 02:26:51,149 | INFO     | ready for new job
[2025-10-13 02:27:43] 2025-10-13 02:26:51,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:27:43] 2025-10-13 02:26:51,149 | INFO     | ***************************************
[2025-10-13 02:27:43] 2025-10-13 02:26:51,149 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:27:43] 2025-10-13 02:26:51,149 | INFO     | ***************************************
[2025-10-13 02:27:43] 2025-10-13 02:26:51,149 | INFO     | 
[2025-10-13 02:27:43] 2025-10-13 02:26:51,150 | INFO     | pilot is running in a VM
[2025-10-13 02:27:43] 2025-10-13 02:26:51,150 | INFO     | architecture information:
[2025-10-13 02:27:43] 2025-10-13 02:26:51,150 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:27:43] 2025-10-13 02:26:51,153 | INFO     | cat /etc/os-release:
[2025-10-13 02:27:43] NAME="CentOS Linux"
[2025-10-13 02:27:43] VERSION="7 (Core)"
[2025-10-13 02:27:43] ID="centos"
[2025-10-13 02:27:43] ID_LIKE="rhel fedora"
[2025-10-13 02:27:43] VERSION_ID="7"
[2025-10-13 02:27:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:27:43] ANSI_COLOR="0;31"
[2025-10-13 02:27:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:27:43] HOME_URL="https://www.centos.org/"
[2025-10-13 02:27:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:27:43] 
[2025-10-13 02:27:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:27:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:27:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:27:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:27:43] 
[2025-10-13 02:27:43] 2025-10-13 02:26:51,153 | INFO     | ***************************************
[2025-10-13 02:27:43] 2025-10-13 02:26:51,656 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | INFO     | sufficient remaining disk space (25404899328 B)
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | INFO     | update_server=False
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | INFO     | aborting loop
[2025-10-13 02:27:43] 2025-10-13 02:26:51,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:27:43] 2025-10-13 02:26:51,855 | INFO     | all data control threads have been joined
[2025-10-13 02:27:43] 2025-10-13 02:26:51,864 | INFO     | all payload control threads have been joined
[2025-10-13 02:27:43] 2025-10-13 02:26:52,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:27:43] 2025-10-13 02:26:52,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:27:43] 2025-10-13 02:26:52,567 | INFO     | all job control threads have been joined
[2025-10-13 02:27:43] 2025-10-13 02:26:52,666 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:52,666 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:52,666 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:52,732 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:52,744 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:52,799 | INFO     | [job] validate thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:52,860 | INFO     | [data] control thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:52,869 | INFO     | [payload] control thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:53,103 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:53,534 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:53,572 | INFO     | [job] control thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:53,974 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:54,094 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:54,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:54,298 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:55,505 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:27:43] 2025-10-13 02:26:56,158 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:27:43] 2025-10-13 02:26:56,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136852281149248)>', '<ExcThread(monitor, started 136851767662336)>']
[2025-10-13 02:27:43] 2025-10-13 02:27:01,227 | INFO     | all workflow threads have been joined
[2025-10-13 02:27:43] 2025-10-13 02:27:01,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:27:43] 2025-10-13 02:27:01,227 | INFO     | traces error code: 0
[2025-10-13 02:27:43] 2025-10-13 02:27:01,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:27:43] 2025-10-13 02:27:22,493 | INFO     | PID=141344 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 02:27:43] 2025-10-13 02:27:22,493 | INFO     | .. there are 2 such processes running
[2025-10-13 02:27:43] 2025-10-13 02:27:22,493 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:27:43] 2025-10-13 02:27:22,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:27:43] 2025-10-13 02:27:22,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:27:43] 2025-10-13 02:27:22,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:27:43] 2025-10-13 02:27:22,493 | INFO     | [monitor] control thread has ended
[2025-10-13 02:27:43] 2025-10-13 02:27:22,522 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:27:43] 2025-10-13 02:27:22,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:27:43] 2025-10-13 02:27:22,524 [wrapper] pilotpid: 141344
[2025-10-13 02:27:43] 2025-10-13 02:27:22,524 [wrapper] Pilot exit status: 0
[2025-10-13 02:27:43] 2025-10-13 02:27:22,527 [wrapper] pandaids: 6840390556
[2025-10-13 02:27:43] 2025-10-13 02:27:22,534 [wrapper] cleanup supervisor_pilot  172270 141345
[2025-10-13 02:27:43] 2025-10-13 02:27:22,534 [wrapper] Test setup, not cleaning
[2025-10-13 02:27:43] 2025-10-13 02:27:22,535 [wrapper] apfmon messages muted
[2025-10-13 02:27:43] 2025-10-13 02:27:22,536 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:27:43] 2025-10-13 02:27:22,536 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:27:43]  *** Error codes and diagnostics ***
[2025-10-13 02:27:43]     "exeErrorCode": 0,
[2025-10-13 02:27:43]     "exeErrorDiag": "",
[2025-10-13 02:27:43]     "pilotErrorCode": 0,
[2025-10-13 02:27:43]     "pilotErrorDiag": "",
[2025-10-13 02:27:43]  *** Listing of results directory ***
[2025-10-13 02:27:43] total 411612
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:01 pilot3.tar.gz
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:23 queuedata.json
[2025-10-13 02:27:43] -rwx------ 1 boinc boinc     36292 Oct 12 16:24 runpilot2-wrapper.sh
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:27:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:58 run_atlas
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:58 job.xml
[2025-10-13 02:27:43] -rw-r--r-- 2 boinc boinc 220849126 Oct 13 01:58 EVNT.46676267._004738.pool.root.1
[2025-10-13 02:27:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:58 start_atlas.sh
[2025-10-13 02:27:43] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:58 shared
[2025-10-13 02:27:43] -rw-r--r-- 2 boinc boinc    569680 Oct 13 01:58 input.tar.gz
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc      6938 Oct 13 01:58 init_data.xml
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:58 boinc_lockfile
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc      2550 Oct 13 01:58 pandaJob.out
[2025-10-13 02:27:43] -rw------- 1 boinc boinc    975595 Oct 13 01:58 agis_schedconf.cvmfs.json
[2025-10-13 02:27:43] -rw------- 1 boinc boinc   1560580 Oct 13 01:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:27:43] drwx------ 5 boinc boinc      4096 Oct 13 01:58 pilot3
[2025-10-13 02:27:43] -rw------- 1 boinc boinc 195505350 Oct 13 02:26 HITS.46676269._083388.pool.root.1
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc       529 Oct 13 02:26 boinc_task_state.xml
[2025-10-13 02:27:43] -rw------- 1 boinc boinc      1021 Oct 13 02:26 memory_monitor_summary.json
[2025-10-13 02:27:43] -rw------- 1 boinc boinc    331037 Oct 13 02:26 log.46676269._083388.job.log.tgz.1
[2025-10-13 02:27:43] -rw------- 1 boinc boinc      7736 Oct 13 02:26 heartbeat.json
[2025-10-13 02:27:43] -rw------- 1 boinc boinc       821 Oct 13 02:27 pilotlog.txt
[2025-10-13 02:27:43] -rw------- 1 boinc boinc        95 Oct 13 02:27 pilot_heartbeat.json
[2025-10-13 02:27:43] -rw------- 1 boinc boinc    287760 Oct 13 02:27 log.46676269._083388.job.log.1
[2025-10-13 02:27:43] -rw------- 1 boinc boinc       357 Oct 13 02:27 output.list
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:27 runtime_log
[2025-10-13 02:27:43] -rw------- 1 boinc boinc    634880 Oct 13 02:27 result.tar.gz
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc      8762 Oct 13 02:27 runtime_log.err
[2025-10-13 02:27:43] -rw------- 1 boinc boinc       641 Oct 13 02:27 PMuLDmW3DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwckNDmOmaBDo.diag
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc      8192 Oct 13 02:27 boinc_mmap_file
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc        27 Oct 13 02:27 wrapper_checkpoint.txt
[2025-10-13 02:27:43] -rw-r--r-- 1 boinc boinc     21926 Oct 13 02:27 stderr.txt
[2025-10-13 02:27:43] HITS file was successfully produced:
[2025-10-13 02:27:43] -rw------- 1 boinc boinc 195505350 Oct 13 02:26 shared/HITS.pool.root.1
[2025-10-13 02:27:43]  *** Contents of shared directory: ***
[2025-10-13 02:27:43] total 407804
[2025-10-13 02:27:43] -rw-r--r-- 2 boinc boinc 220849126 Oct 13 01:58 ATLAS.root_0
[2025-10-13 02:27:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:58 start_atlas.sh
[2025-10-13 02:27:43] -rw-r--r-- 2 boinc boinc    569680 Oct 13 01:58 input.tar.gz
[2025-10-13 02:27:43] -rw------- 1 boinc boinc 195505350 Oct 13 02:26 HITS.pool.root.1
[2025-10-13 02:27:43] -rw------- 1 boinc boinc    634880 Oct 13 02:27 result.tar.gz
02:27:45 (137492): run_atlas exited; CPU time 15365.810620
02:27:45 (137492): called boinc_finish(0)

</stderr_txt>
]]>

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