Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:09:12 (3751597): wrapper (7.7.26015): starting
16:09:12 (3751597): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 16:09:12] Arguments: --nthreads 9
[2025-10-12 16:09:12] Threads: 9
[2025-10-12 16:09:12] Checking for CVMFS
[2025-10-12 16:09:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:09:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:09:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:09:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:09:13] 2.13.2.0 1889558 129706 255796 151635 2 613 31919677 40960000 18945 16776704 0 193444815 99.707 169492228 30523 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:09:13] CVMFS is ok
[2025-10-12 16:09:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:09:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:09:13] Further information can be found at the LHC@home message board.
[2025-10-12 16:09:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:09:13] Checking for apptainer binary...
[2025-10-12 16:09:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:09:13] Running /usr/bin/apptainer --version
[2025-10-12 16:09:13] apptainer version 1.4.3-1.el9
[2025-10-12 16:09:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:09:13] c6-5-7-1.aglt2.org
[2025-10-12 16:09:13] apptainer works
[2025-10-12 16:09:13] Set ATHENA_PROC_NUMBER=9
[2025-10-12 16:09:13] Set ATHENA_CORE_NUMBER=9
[2025-10-12 16:09:13] Starting ATLAS job with PandaID=6840182270
[2025-10-12 16:09:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:10:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:10:42] 2025-10-12 22:09:44,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:10:42] 2025-10-12 22:09:44,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:10:42] 2025-10-12 22:09:44,315 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:10:42] 2025-10-12 22:09:44,315 | INFO     | sum of square deviations: 509439825.42372864
[2025-10-12 18:10:42] 2025-10-12 22:09:44,315 | INFO     | sum of deviations: 9564973569.22034
[2025-10-12 18:10:42] 2025-10-12 22:09:44,315 | INFO     | mean x: 1760303361.5254238
[2025-10-12 18:10:42] 2025-10-12 22:09:44,316 | INFO     | mean y: 2134813.093220339
[2025-10-12 18:10:42] 2025-10-12 22:09:44,316 | INFO     | -- intersect: -33048393014.79291
[2025-10-12 18:10:42] 2025-10-12 22:09:44,316 | INFO     | intersect: -33048393014.79291
[2025-10-12 18:10:42] 2025-10-12 22:09:44,316 | INFO     | chi2: 2.229224825922747
[2025-10-12 18:10:42] 2025-10-12 22:09:44,316 | INFO     | sum of square deviations: 447383762.92035353
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | sum of deviations: 15659148286.460175
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | mean x: 1760303209.0265486
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | mean y: 2149248.5132743362
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | -- intersect: -61611282583.13261
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | intersect: -61611282583.13261
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | chi2: 1.5584720896716064
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | current chi2=1.5584720896716064 (change=30.089057346357816 %)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,317 | INFO     | sum of square deviations: 390583612.91666734
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | sum of deviations: 15239882363.138885
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | mean x: 1760303056.5277777
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | mean y: 2148117.1203703703
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | -- intersect: -68681766460.4243
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | intersect: -68681766460.4243
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | chi2: 1.558367020553515
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | current chi2=1.558367020553515 (change=0.006741802999733788 %)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,318 | INFO     | right removable region: 107
[2025-10-12 18:10:42] 2025-10-12 22:09:44,319 | INFO     | sum of square deviations: 447381932.92035353
[2025-10-12 18:10:42] 2025-10-12 22:09:44,319 | INFO     | sum of deviations: -7553831037.584071
[2025-10-12 18:10:42] 2025-10-12 22:09:44,319 | INFO     | mean x: 1760303514.0265486
[2025-10-12 18:10:42] 2025-10-12 22:09:44,319 | INFO     | mean y: 2176244.1946902657
[2025-10-12 18:10:42] 2025-10-12 22:09:44,319 | INFO     | -- intersect: 29724063386.627182
[2025-10-12 18:10:42] 2025-10-12 22:09:44,319 | INFO     | intersect: 29724063386.627182
[2025-10-12 18:10:42] 2025-10-12 22:09:44,319 | INFO     | chi2: 0.7156467348148381
[2025-10-12 18:10:42] 2025-10-12 22:09:44,320 | INFO     | current chi2=0.7156467348148381 (change=67.89705881197473 %)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,320 | INFO     | sum of square deviations: 390579952.91666734
[2025-10-12 18:10:42] 2025-10-12 22:09:44,320 | INFO     | sum of deviations: -7029474407.305555
[2025-10-12 18:10:42] 2025-10-12 22:09:44,320 | INFO     | mean x: 1760303666.5277777
[2025-10-12 18:10:42] 2025-10-12 22:09:44,320 | INFO     | mean y: 2174844.6018518517
[2025-10-12 18:10:42] 2025-10-12 22:09:44,320 | INFO     | -- intersect: 31683292834.75947
[2025-10-12 18:10:42] 2025-10-12 22:09:44,320 | INFO     | intersect: 31683292834.75947
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | chi2: 0.7131616270860166
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | current chi2=0.7131616270860166 (change=0.3472534153969794 %)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | left removable region: 20
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | sum of square deviations: 204161756.8965514
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | sum of deviations: -361075104.75862074
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | mean x: 1760303636.0344827
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | mean y: 2193289.9195402297
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | -- intersect: 3115419926.728856
[2025-10-12 18:10:42] 2025-10-12 22:09:44,321 | INFO     | intersect: 3115419926.728856
[2025-10-12 18:10:42] 2025-10-12 22:09:44,322 | INFO     | chi2: 0.014630012181463536
[2025-10-12 18:10:42] 2025-10-12 22:09:44,322 | INFO     | -- intersect: 3115419926.728856
[2025-10-12 18:10:42] 2025-10-12 22:09:44,322 | INFO     | current memory leak: -1.77 B/s (using 87 data points, chi2=0.01)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,322 | INFO     | could have reported an average CPU frequency of 3023 MHz (7 samples)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,322 | INFO     | ..............................
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . Timing measurements:
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . get job = 0 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . initial setup = 2 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . payload setup = 7 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . stage-in = 0 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . payload execution = 7173 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . stage-out = 2 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | . log creation = 0 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,323 | INFO     | ..............................
[2025-10-12 18:10:42] 2025-10-12 22:09:44,645 | INFO     | 
[2025-10-12 18:10:42] 2025-10-12 22:09:44,646 | INFO     | job summary report
[2025-10-12 18:10:42] 2025-10-12 22:09:44,646 | INFO     | --------------------------------------------------
[2025-10-12 18:10:42] 2025-10-12 22:09:44,646 | INFO     | PanDA job id: 6840182270
[2025-10-12 18:10:42] 2025-10-12 22:09:44,646 | INFO     | task id: 46676269
[2025-10-12 18:10:42] 2025-10-12 22:09:44,646 | INFO     | errors: (none)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:10:42] 2025-10-12 22:09:44,646 | INFO     | pilot state: finished 
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | transexitcode: 0
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | exeerrorcode: 0
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | exeerrordiag: 
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | exitcode: 0
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | exitmsg: OK
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | cpuconsumptiontime: 38747 s
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | nevents: 400
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | neventsw: 0
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | pid: 3762966
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | pgrp: 3762966
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | corecount: 9
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | event service: False
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 7185: 2376705, 7188: 2385703, 7190: 2385759, 7204: 2386081}
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | --------------------------------------------------
[2025-10-12 18:10:42] 2025-10-12 22:09:44,647 | INFO     | 
[2025-10-12 18:10:42] 2025-10-12 22:09:44,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 18:10:42] 2025-10-12 22:09:44,692 | INFO     | time since job start (7220s) is within the limit (172800.0s)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:10:42] 2025-10-12 22:09:44,736 | INFO     | job 6840182270 has completed (purged errors)
[2025-10-12 18:10:42] 2025-10-12 22:09:44,736 | INFO     | overall cleanup function is called
[2025-10-12 18:10:42] 2025-10-12 22:09:45,749 | INFO     | --- collectZombieJob: --- 10, [3762966]
[2025-10-12 18:10:42] 2025-10-12 22:09:45,749 | INFO     | zombie collector waiting for pid 3762966
[2025-10-12 18:10:42] 2025-10-12 22:09:45,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:10:42] 2025-10-12 22:09:45,749 | INFO     | collected zombie processes
[2025-10-12 18:10:42] 2025-10-12 22:09:45,749 | INFO     | will attempt to kill all subprocesses of pid=3762966
[2025-10-12 18:10:42] 2025-10-12 22:09:46,282 | INFO     | process IDs to be killed: [3762966] (in reverse order)
[2025-10-12 18:10:42] 2025-10-12 22:09:46,455 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:10:42] 2025-10-12 22:09:46,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:10:42] 2025-10-12 22:09:46,471 | INFO     | did not find any defunct processes belonging to 3762966
[2025-10-12 18:10:42] 2025-10-12 22:09:46,486 | INFO     | did not find any defunct processes belonging to 3762966
[2025-10-12 18:10:42] 2025-10-12 22:09:46,487 | INFO     | ready for new job
[2025-10-12 18:10:42] 2025-10-12 22:09:46,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:10:42] 2025-10-12 22:09:46,489 | INFO     | ***************************************
[2025-10-12 18:10:42] 2025-10-12 22:09:46,489 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:10:42] 2025-10-12 22:09:46,489 | INFO     | ***************************************
[2025-10-12 18:10:42] 2025-10-12 22:09:46,489 | INFO     | 
[2025-10-12 18:10:42] 2025-10-12 22:09:46,492 | INFO     | architecture information:
[2025-10-12 18:10:42] 2025-10-12 22:09:46,492 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:10:42] 2025-10-12 22:09:46,513 | INFO     | cat /etc/os-release:
[2025-10-12 18:10:42] NAME="CentOS Linux"
[2025-10-12 18:10:42] VERSION="7 (Core)"
[2025-10-12 18:10:42] ID="centos"
[2025-10-12 18:10:42] ID_LIKE="rhel fedora"
[2025-10-12 18:10:42] VERSION_ID="7"
[2025-10-12 18:10:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:10:42] ANSI_COLOR="0;31"
[2025-10-12 18:10:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:10:42] HOME_URL="https://www.centos.org/"
[2025-10-12 18:10:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:10:42] 
[2025-10-12 18:10:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:10:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:10:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:10:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:10:42] 
[2025-10-12 18:10:42] 2025-10-12 22:09:46,514 | INFO     | ***************************************
[2025-10-12 18:10:42] 2025-10-12 22:09:47,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 18:10:42] 2025-10-12 22:09:47,041 | INFO     | sufficient remaining disk space (74328309760 B)
[2025-10-12 18:10:42] 2025-10-12 22:09:47,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:10:42] 2025-10-12 22:09:47,042 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:10:42] 2025-10-12 22:09:47,042 | INFO     | update_server=False
[2025-10-12 18:10:42] 2025-10-12 22:09:47,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:10:42] 2025-10-12 22:09:47,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:10:42] 2025-10-12 22:09:47,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:10:42] 2025-10-12 22:09:47,045 | INFO     | aborting loop
[2025-10-12 18:10:42] 2025-10-12 22:09:47,563 | INFO     | all data control threads have been joined
[2025-10-12 18:10:42] 2025-10-12 22:09:48,048 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:48,062 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:48,104 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:48,181 | INFO     | all payload control threads have been joined
[2025-10-12 18:10:42] 2025-10-12 22:09:48,264 | INFO     | all job control threads have been joined
[2025-10-12 18:10:42] 2025-10-12 22:09:48,336 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:48,462 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:48,571 | INFO     | [data] control thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:48,782 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:48,959 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:49,050 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:49,187 | INFO     | [payload] control thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:49,270 | INFO     | [job] control thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:49,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:49,294 | INFO     | [job] validate thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:49,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:10:42] 2025-10-12 22:09:49,554 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:49,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:10:42] 2025-10-12 22:09:50,487 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:09:53,920 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:10:42] 2025-10-12 22:10:18,575 | INFO     | PID=3755303 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:10:42] 2025-10-12 22:10:18,576 | INFO     | .. there are 26 such processes running
[2025-10-12 18:10:42] 2025-10-12 22:10:18,576 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:10:42] 2025-10-12 22:10:18,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:10:42] 2025-10-12 22:10:18,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:10:42] 2025-10-12 22:10:36,789 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:10:42] 2025-10-12 22:10:36,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951041464128)>', '<ExcThread(monitor, started 139950527850240)>']
[2025-10-12 18:10:42] 2025-10-12 22:10:37,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:10:42] 2025-10-12 22:10:37,695 | INFO     | [monitor] control thread has ended
[2025-10-12 18:10:42] 2025-10-12 22:10:41,897 | INFO     | all workflow threads have been joined
[2025-10-12 18:10:42] 2025-10-12 22:10:41,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:10:42] 2025-10-12 22:10:41,898 | INFO     | traces error code: 0
[2025-10-12 18:10:42] 2025-10-12 22:10:41,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:10:42] 2025-10-12 22:10:42,140 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:10:42] 2025-10-12 22:10:42,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:10:42] 2025-10-12 22:10:42,146 [wrapper] pilotpid: 3755303
[2025-10-12 18:10:42] 2025-10-12 22:10:42,148 [wrapper] Pilot exit status: 0
[2025-10-12 18:10:42] 2025-10-12 22:10:42,163 [wrapper] pandaids: 6840182270
[2025-10-12 18:10:42] 2025-10-12 22:10:42,236 [wrapper] cleanup supervisor_pilot 4160540 3755304
[2025-10-12 18:10:42] 2025-10-12 22:10:42,239 [wrapper] Test setup, not cleaning
[2025-10-12 18:10:42] 2025-10-12 22:10:42,242 [wrapper] apfmon messages muted
[2025-10-12 18:10:42] 2025-10-12 22:10:42,245 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:10:42] 2025-10-12 22:10:42,248 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:10:42]  *** Error codes and diagnostics ***
[2025-10-12 18:10:42]     "exeErrorCode": 0,
[2025-10-12 18:10:42]     "exeErrorDiag": "",
[2025-10-12 18:10:42]     "pilotErrorCode": 0,
[2025-10-12 18:10:42]     "pilotErrorDiag": "",
[2025-10-12 18:10:42]  *** Listing of results directory ***
[2025-10-12 18:10:42] total 409100
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:40 queuedata.json
[2025-10-12 18:10:42] -rwx------. 1 boincer umatlas     36292 Oct 12 10:42 runpilot2-wrapper.sh
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:10:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:09 run_atlas
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:09 job.xml
[2025-10-12 18:10:42] -rw-r--r--. 2 boincer umatlas 218571312 Oct 12 16:09 EVNT.46676267._004530.pool.root.1
[2025-10-12 18:10:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:09 start_atlas.sh
[2025-10-12 18:10:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:09 shared
[2025-10-12 18:10:42] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 16:09 input.tar.gz
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:09 boinc_lockfile
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:09 pandaJob.out
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas    975536 Oct 12 16:09 agis_schedconf.cvmfs.json
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:10:42] drwx------. 5 boincer umatlas      4096 Oct 12 16:09 pilot3
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas 193676425 Oct 12 18:08 HITS.46676269._081117.pool.root.1
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas       529 Oct 12 18:08 boinc_task_state.xml
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas      1042 Oct 12 18:09 memory_monitor_summary.json
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas    372837 Oct 12 18:09 log.46676269._081117.job.log.tgz.1
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas        95 Oct 12 18:09 pilot_heartbeat.json
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 18:09 init_data.xml
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas      7820 Oct 12 18:09 heartbeat.json
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas        27 Oct 12 18:10 wrapper_checkpoint.txt
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:10 boinc_mmap_file
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas      4824 Oct 12 18:10 pilotlog.txt
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas   1007564 Oct 12 18:10 log.46676269._081117.job.log.1
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas       357 Oct 12 18:10 output.list
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:10 runtime_log
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas   1402880 Oct 12 18:10 result.tar.gz
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 18:10 runtime_log.err
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas       652 Oct 12 18:10 jSwMDmVSCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfIkNDmazTpJm.diag
[2025-10-12 18:10:42] -rw-r--r--. 1 boincer umatlas     20994 Oct 12 18:10 stderr.txt
[2025-10-12 18:10:42] HITS file was successfully produced:
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas 193676425 Oct 12 18:08 shared/HITS.pool.root.1
[2025-10-12 18:10:42]  *** Contents of shared directory: ***
[2025-10-12 18:10:42] total 404544
[2025-10-12 18:10:42] -rw-r--r--. 2 boincer umatlas 218571312 Oct 12 16:09 ATLAS.root_0
[2025-10-12 18:10:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:09 start_atlas.sh
[2025-10-12 18:10:42] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 16:09 input.tar.gz
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas 193676425 Oct 12 18:08 HITS.pool.root.1
[2025-10-12 18:10:42] -rw-------. 1 boincer umatlas   1402880 Oct 12 18:10 result.tar.gz
18:10:43 (3751597): run_atlas exited; CPU time 38891.448810
18:10:43 (3751597): called boinc_finish(0)

</stderr_txt>
]]>

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