Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:50:43 (23877): wrapper (7.7.26015): starting
15:50:43 (23877): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:50:43] Arguments: --nthreads 8
[2025-10-12 15:50:43] Threads: 8
[2025-10-12 15:50:43] Checking for CVMFS
[2025-10-12 15:50:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:50:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:50:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:50:44] 2.11.2.0 5808 106014 98920 151635 3 57 15361203 18432000 2749 130560 0 66554434 99.978 4081141 4210 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 15:50:44] CVMFS is ok
[2025-10-12 15:50:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:50:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:50:44] Further information can be found at the LHC@home message board.
[2025-10-12 15:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:50:44] Checking for apptainer binary...
[2025-10-12 15:50:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:50:44] Running /usr/bin/apptainer --version
[2025-10-12 15:50:44] apptainer version 1.3.2-1.el7
[2025-10-12 15:50:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:50:44] c-9-34.aglt2.org
[2025-10-12 15:50:44] apptainer works
[2025-10-12 15:50:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:50:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:50:44] Starting ATLAS job with PandaID=6840390490
[2025-10-12 15:50:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:37:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:37:17] 2025-10-12 22:36:31,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:37:17] 2025-10-12 22:36:31,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:37:17] 2025-10-12 22:36:31,661 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:37:17] 2025-10-12 22:36:31,661 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,662 | INFO     | sum of deviations: -7846389557.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,662 | INFO     | mean x: 1760303621.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,662 | INFO     | mean y: 2472060.36196319
[2025-10-12 18:37:17] 2025-10-12 22:36:31,662 | INFO     | -- intersect: 10288141373.092644
[2025-10-12 18:37:17] 2025-10-12 22:36:31,662 | INFO     | intersect: 10288141373.092644
[2025-10-12 18:37:17] 2025-10-12 22:36:31,663 | INFO     | chi2: 2.1927216063223356
[2025-10-12 18:37:17] 2025-10-12 22:36:31,663 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | sum of deviations: 2942366963.999999
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | mean x: 1760303468.5
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | mean y: 2485452.189873418
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | -- intersect: -4232501658.1602125
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | intersect: -4232501658.1602125
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | chi2: 1.4200966933728751
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | current chi2=1.4200966933728751 (change=35.23588725179382 %)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,664 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,665 | INFO     | sum of deviations: 2815688508.000001
[2025-10-12 18:37:17] 2025-10-12 22:36:31,665 | INFO     | mean x: 1760303316.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,665 | INFO     | mean y: 2485280.3921568627
[2025-10-12 18:37:17] 2025-10-12 22:36:31,665 | INFO     | -- intersect: -4460628429.579366
[2025-10-12 18:37:17] 2025-10-12 22:36:31,666 | INFO     | intersect: -4460628429.579366
[2025-10-12 18:37:17] 2025-10-12 22:36:31,666 | INFO     | chi2: 1.4205065796449297
[2025-10-12 18:37:17] 2025-10-12 22:36:31,666 | INFO     | current chi2=1.4205065796449297 (change=-0.02886326501338399 %)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,666 | INFO     | right removable region: 152
[2025-10-12 18:37:17] 2025-10-12 22:36:31,666 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 18:37:17] 2025-10-12 22:36:31,667 | INFO     | sum of deviations: -28765506815.5
[2025-10-12 18:37:17] 2025-10-12 22:36:31,667 | INFO     | mean x: 1760303773.5
[2025-10-12 18:37:17] 2025-10-12 22:36:31,667 | INFO     | mean y: 2498250.360759494
[2025-10-12 18:37:17] 2025-10-12 22:36:31,667 | INFO     | -- intersect: 41405074198.33201
[2025-10-12 18:37:17] 2025-10-12 22:36:31,667 | INFO     | intersect: 41405074198.33201
[2025-10-12 18:37:17] 2025-10-12 22:36:31,667 | INFO     | chi2: 0.9233387443597423
[2025-10-12 18:37:17] 2025-10-12 22:36:31,667 | INFO     | current chi2=0.9233387443597423 (change=57.89074446580661 %)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,668 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,668 | INFO     | sum of deviations: -23811282412.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,668 | INFO     | mean x: 1760303926.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,668 | INFO     | mean y: 2491521.3921568627
[2025-10-12 18:37:17] 2025-10-12 22:36:31,669 | INFO     | -- intersect: 37745479607.53139
[2025-10-12 18:37:17] 2025-10-12 22:36:31,669 | INFO     | intersect: 37745479607.53139
[2025-10-12 18:37:17] 2025-10-12 22:36:31,669 | INFO     | chi2: 0.9116543218796298
[2025-10-12 18:37:17] 2025-10-12 22:36:31,669 | INFO     | current chi2=0.9116543218796298 (change=1.2654535024645415 %)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,669 | INFO     | left removable region: 20
[2025-10-12 18:37:17] 2025-10-12 22:36:31,669 | INFO     | sum of square deviations: 713140813.0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,670 | INFO     | sum of deviations: -2167867989.5000014
[2025-10-12 18:37:17] 2025-10-12 22:36:31,670 | INFO     | mean x: 1760303895.5
[2025-10-12 18:37:17] 2025-10-12 22:36:31,670 | INFO     | mean y: 2488534.340909091
[2025-10-12 18:37:17] 2025-10-12 22:36:31,670 | INFO     | -- intersect: 5353614703.649922
[2025-10-12 18:37:17] 2025-10-12 22:36:31,670 | INFO     | intersect: 5353614703.649922
[2025-10-12 18:37:17] 2025-10-12 22:36:31,670 | INFO     | chi2: 0.03855191292402639
[2025-10-12 18:37:17] 2025-10-12 22:36:31,670 | INFO     | -- intersect: 5353614703.649922
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | current memory leak: -3.04 B/s (using 132 data points, chi2=0.04)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | ..............................
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | . Timing measurements:
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | . get job = 0 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | . initial setup = 2 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | . payload setup = 4 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | . stage-in = 0 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,671 | INFO     | . payload execution = 9905 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,672 | INFO     | . stage-out = 0 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,672 | INFO     | . log creation = 0 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,672 | INFO     | ..............................
[2025-10-12 18:37:17] 2025-10-12 22:36:31,734 | INFO     | 
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | job summary report
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | --------------------------------------------------
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | PanDA job id: 6840390490
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | task id: 46676269
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | errors: (none)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | pilot state: finished 
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | transexitcode: 0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,735 | INFO     | exeerrorcode: 0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | exeerrordiag: 
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | exitcode: 0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | exitmsg: OK
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | cpuconsumptiontime: 73327 s
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | nevents: 400
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | neventsw: 0
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | pid: 34488
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | pgrp: 34488
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | corecount: 8
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | event service: False
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | sizes: {0: 2348806, 4: 2349068, 11: 2349096, 9914: 2377772, 9915: 2386770, 9916: 2386826, 9922: 2387212}
[2025-10-12 18:37:17] 2025-10-12 22:36:31,736 | INFO     | --------------------------------------------------
[2025-10-12 18:37:17] 2025-10-12 22:36:31,737 | INFO     | 
[2025-10-12 18:37:17] 2025-10-12 22:36:31,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 18:37:17] 2025-10-12 22:36:31,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:37:17] 2025-10-12 22:36:31,753 | INFO     | job 6840390490 has completed (purged errors)
[2025-10-12 18:37:17] 2025-10-12 22:36:31,753 | INFO     | overall cleanup function is called
[2025-10-12 18:37:17] 2025-10-12 22:36:32,760 | INFO     | --- collectZombieJob: --- 10, [34488]
[2025-10-12 18:37:17] 2025-10-12 22:36:32,760 | INFO     | zombie collector waiting for pid 34488
[2025-10-12 18:37:17] 2025-10-12 22:36:32,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:37:17] 2025-10-12 22:36:32,760 | INFO     | collected zombie processes
[2025-10-12 18:37:17] 2025-10-12 22:36:32,761 | INFO     | will attempt to kill all subprocesses of pid=34488
[2025-10-12 18:37:17] 2025-10-12 22:36:33,040 | INFO     | process IDs to be killed: [34488] (in reverse order)
[2025-10-12 18:37:17] 2025-10-12 22:36:33,106 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:37:17] 2025-10-12 22:36:33,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:37:17] 2025-10-12 22:36:33,116 | INFO     | did not find any defunct processes belonging to 34488
[2025-10-12 18:37:17] 2025-10-12 22:36:33,121 | INFO     | did not find any defunct processes belonging to 34488
[2025-10-12 18:37:17] 2025-10-12 22:36:33,121 | INFO     | ready for new job
[2025-10-12 18:37:17] 2025-10-12 22:36:33,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:37:17] 2025-10-12 22:36:33,122 | INFO     | ***************************************
[2025-10-12 18:37:17] 2025-10-12 22:36:33,122 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:37:17] 2025-10-12 22:36:33,123 | INFO     | ***************************************
[2025-10-12 18:37:17] 2025-10-12 22:36:33,123 | INFO     | 
[2025-10-12 18:37:17] 2025-10-12 22:36:33,124 | INFO     | architecture information:
[2025-10-12 18:37:17] 2025-10-12 22:36:33,124 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:37:17] 2025-10-12 22:36:33,133 | INFO     | cat /etc/os-release:
[2025-10-12 18:37:17] NAME="CentOS Linux"
[2025-10-12 18:37:17] VERSION="7 (Core)"
[2025-10-12 18:37:17] ID="centos"
[2025-10-12 18:37:17] ID_LIKE="rhel fedora"
[2025-10-12 18:37:17] VERSION_ID="7"
[2025-10-12 18:37:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:37:17] ANSI_COLOR="0;31"
[2025-10-12 18:37:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:37:17] HOME_URL="https://www.centos.org/"
[2025-10-12 18:37:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:37:17] 
[2025-10-12 18:37:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:37:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:37:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:37:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:37:17] 
[2025-10-12 18:37:17] 2025-10-12 22:36:33,133 | INFO     | ***************************************
[2025-10-12 18:37:17] 2025-10-12 22:36:33,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 18:37:17] 2025-10-12 22:36:33,650 | INFO     | sufficient remaining disk space (104941486080 B)
[2025-10-12 18:37:17] 2025-10-12 22:36:33,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:37:17] 2025-10-12 22:36:33,651 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:37:17] 2025-10-12 22:36:33,651 | INFO     | update_server=False
[2025-10-12 18:37:17] 2025-10-12 22:36:33,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:37:17] 2025-10-12 22:36:33,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:37:17] 2025-10-12 22:36:33,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:37:17] 2025-10-12 22:36:33,782 | INFO     | all payload control threads have been joined
[2025-10-12 18:37:17] 2025-10-12 22:36:33,818 | INFO     | all data control threads have been joined
[2025-10-12 18:37:17] 2025-10-12 22:36:34,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:37:17] 2025-10-12 22:36:34,148 | INFO     | aborting loop
[2025-10-12 18:37:17] 2025-10-12 22:36:34,656 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,656 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,788 | INFO     | [payload] control thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,824 | INFO     | [data] control thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,880 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,917 | INFO     | [job] validate thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,953 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,961 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:34,979 | INFO     | all job control threads have been joined
[2025-10-12 18:37:17] 2025-10-12 22:36:35,149 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:35,233 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:35,500 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:35,600 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:35,657 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:35,984 | INFO     | [job] control thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:37,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:37:17] 2025-10-12 22:36:41,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:36:43,834 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:37:17] 2025-10-12 22:36:44,840 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:37:17] 2025-10-12 22:37:04,017 | INFO     | PID=27939 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:37:17] 2025-10-12 22:37:04,017 | INFO     | .. there are 4 such processes running
[2025-10-12 18:37:17] 2025-10-12 22:37:04,018 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:37:17] 2025-10-12 22:37:04,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:37:17] 2025-10-12 22:37:04,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:37:17] 2025-10-12 22:37:11,395 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:37:17] 2025-10-12 22:37:12,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708447037248)>', '<ExcThread(monitor, started 140707557799680)>']
[2025-10-12 18:37:17] 2025-10-12 22:37:13,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:37:17] 2025-10-12 22:37:13,066 | INFO     | [monitor] control thread has ended
[2025-10-12 18:37:17] 2025-10-12 22:37:17,092 | INFO     | all workflow threads have been joined
[2025-10-12 18:37:17] 2025-10-12 22:37:17,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:37:17] 2025-10-12 22:37:17,093 | INFO     | traces error code: 0
[2025-10-12 18:37:17] 2025-10-12 22:37:17,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:37:17] 2025-10-12 22:37:17,185 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:37:17] 2025-10-12 22:37:17,190 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:37:17] 2025-10-12 22:37:17,193 [wrapper] pilotpid: 27939
[2025-10-12 18:37:17] 2025-10-12 22:37:17,195 [wrapper] Pilot exit status: 0
[2025-10-12 18:37:17] 2025-10-12 22:37:17,204 [wrapper] pandaids: 6840390490
[2025-10-12 18:37:17] 2025-10-12 22:37:17,270 [wrapper] cleanup supervisor_pilot 48557 27940
[2025-10-12 18:37:17] 2025-10-12 22:37:17,273 [wrapper] Test setup, not cleaning
[2025-10-12 18:37:17] 2025-10-12 22:37:17,275 [wrapper] apfmon messages muted
[2025-10-12 18:37:17] 2025-10-12 22:37:17,277 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:37:17] 2025-10-12 22:37:17,279 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:37:17]  *** Error codes and diagnostics ***
[2025-10-12 18:37:17]     "exeErrorCode": 0,
[2025-10-12 18:37:17]     "exeErrorDiag": "",
[2025-10-12 18:37:17]     "pilotErrorCode": 0,
[2025-10-12 18:37:17]     "pilotErrorDiag": "",
[2025-10-12 18:37:17]  *** Listing of results directory ***
[2025-10-12 18:37:17] total 408744
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 18:37:17] -rwx------ 1 boincer umatlas     36292 Oct 12 12:18 runpilot2-wrapper.sh
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:18 queuedata.json
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:37:17] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:50 run_atlas
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:50 job.xml
[2025-10-12 18:37:17] -rw-r--r-- 2 boincer umatlas 219255620 Oct 12 15:50 EVNT.46676267._004735.pool.root.1
[2025-10-12 18:37:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:50 start_atlas.sh
[2025-10-12 18:37:17] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:50 shared
[2025-10-12 18:37:17] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 15:50 input.tar.gz
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:50 boinc_lockfile
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 15:50 pandaJob.out
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas    975536 Oct 12 15:50 agis_schedconf.cvmfs.json
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas   1560580 Oct 12 15:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:37:17] drwx------ 5 boincer umatlas      4096 Oct 12 15:50 pilot3
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas 191808778 Oct 12 18:35 HITS.46676269._083322.pool.root.1
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas       529 Oct 12 18:35 boinc_task_state.xml
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas      1049 Oct 12 18:36 memory_monitor_summary.json
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas    404281 Oct 12 18:36 log.46676269._083322.job.log.tgz.1
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas      7828 Oct 12 18:36 heartbeat.json
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas      6035 Oct 12 18:36 init_data.xml
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas        95 Oct 12 18:37 pilot_heartbeat.json
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:37 boinc_mmap_file
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas        28 Oct 12 18:37 wrapper_checkpoint.txt
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas      4894 Oct 12 18:37 pilotlog.txt
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas   1387185 Oct 12 18:37 log.46676269._083322.job.log.1
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas       357 Oct 12 18:37 output.list
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:37 runtime_log
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas   1812480 Oct 12 18:37 result.tar.gz
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas      8693 Oct 12 18:37 runtime_log.err
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas       657 Oct 12 18:37 Oe3MDmCxDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYPUMDmgSh9Fm.diag
[2025-10-12 18:37:17] -rw-r--r-- 1 boincer umatlas     20843 Oct 12 18:37 stderr.txt
[2025-10-12 18:37:17] HITS file was successfully produced:
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas 191808778 Oct 12 18:35 shared/HITS.pool.root.1
[2025-10-12 18:37:17]  *** Contents of shared directory: ***
[2025-10-12 18:37:17] total 403788
[2025-10-12 18:37:17] -rw-r--r-- 2 boincer umatlas 219255620 Oct 12 15:50 ATLAS.root_0
[2025-10-12 18:37:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:50 start_atlas.sh
[2025-10-12 18:37:17] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 15:50 input.tar.gz
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas 191808778 Oct 12 18:35 HITS.pool.root.1
[2025-10-12 18:37:17] -rw------- 1 boincer umatlas   1812480 Oct 12 18:37 result.tar.gz
18:37:18 (23877): run_atlas exited; CPU time 73630.533957
18:37:18 (23877): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN