Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
20:33:39 (3837769): wrapper (7.7.26015): starting
20:33:39 (3837769): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:33:39] Arguments: --nthreads 12
[2025-10-12 20:33:39] Threads: 12
[2025-10-12 20:33:39] Checking for CVMFS
[2025-10-12 20:33:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:33:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:33:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:33:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:33:40] 2.11.0.0 3299214 3547 89284 151636 3 188 5435737 6144000 14613 130560 0 69719353 100.000 129852 196 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 20:33:40] CVMFS is ok
[2025-10-12 20:33:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:33:40] Checking for apptainer binary...
[2025-10-12 20:33:40] apptainer is not installed, using version from CVMFS
[2025-10-12 20:33:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:33:40] radiat0r
[2025-10-12 20:33:40] apptainer works
[2025-10-12 20:33:40] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:33:40] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:33:40] Starting ATLAS job with PandaID=6840082361
[2025-10-12 20:33:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:23:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:23:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/cc/log.46676269._080119.job.log.tgz.1
[2025-10-12 21:23:20]  workdir=None
[2025-10-12 21:23:20] ]
[2025-10-12 21:23:20] 2025-10-12 21:22:35,185 | INFO     | transferring file log.46676269._080119.job.log.tgz.1 from /var/lib/boinc/slots/13/PanDA_Pilot-6840082361/log.46676269._080119.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 21:23:20] 2025-10-12 21:22:35,186 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/13/PanDA_Pilot-6840082361/log.46676269._080119.job.log.tgz.1 /var/lib/boinc/slots/13/log.46676269._080119.j
[2025-10-12 21:23:20] 2025-10-12 21:22:35,212 | INFO     | adding to output.list: log.46676269._080119.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/cc/log.46676269._080119.job.log.tg
[2025-10-12 21:23:20] 2025-10-12 21:22:35,213 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:23:20] 2025-10-12 21:22:35,213 | INFO     | summary of transferred files:
[2025-10-12 21:23:20] 2025-10-12 21:22:35,213 | INFO     |  -- lfn=log.46676269._080119.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:23:20] 2025-10-12 21:22:35,214 | INFO     | stage-out finished correctly
[2025-10-12 21:23:20] 2025-10-12 21:22:35,533 | INFO     | monitor loop #206: job 0:6840082361 is in state 'finished'
[2025-10-12 21:23:20] 2025-10-12 21:22:35,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:23:20] 2025-10-12 21:22:36,320 | INFO     | time since job start (2923s) is within the limit (172800.0s)
[2025-10-12 21:23:20] 2025-10-12 21:22:37,531 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:23:20] 2025-10-12 21:22:38,042 | INFO     | monitor loop #207: job 0:6840082361 is in state 'finished'
[2025-10-12 21:23:20] 2025-10-12 21:22:38,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:23:20] 2025-10-12 21:22:38,325 | INFO     | time since job start (2925s) is within the limit (172800.0s)
[2025-10-12 21:23:20] 2025-10-12 21:22:39,118 | INFO     | job 6840082361 has state=finished
[2025-10-12 21:23:20] 2025-10-12 21:22:39,119 | INFO     | preparing for final server update for job 6840082361 in state='finished'
[2025-10-12 21:23:20] 2025-10-12 21:22:39,119 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:23:20] 2025-10-12 21:22:39,119 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:23:20] 2025-10-12 21:22:39,119 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:23:20] 2025-10-12 21:22:39,120 | INFO     | job 6840082361 has finished - writing final server update
[2025-10-12 21:23:20] 2025-10-12 21:22:39,120 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:23:20] 2025-10-12 21:22:39,122 | INFO     | executing command: lscpu
[2025-10-12 21:23:20] 2025-10-12 21:22:39,320 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:23:20] 2025-10-12 21:22:40,333 | INFO     | time since job start (2927s) is within the limit (172800.0s)
[2025-10-12 21:23:20] 2025-10-12 21:22:40,545 | INFO     | monitor loop #208: job 0:6840082361 is in state 'finished'
[2025-10-12 21:23:20] 2025-10-12 21:22:40,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:23:20] 2025-10-12 21:22:42,334 | INFO     | time since job start (2929s) is within the limit (172800.0s)
[2025-10-12 21:23:20] 2025-10-12 21:22:43,046 | INFO     | monitor loop #209: job 0:6840082361 is in state 'finished'
[2025-10-12 21:23:20] 2025-10-12 21:22:43,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:23:20] 2025-10-12 21:22:44,341 | INFO     | time since job start (2931s) is within the limit (172800.0s)
[2025-10-12 21:23:20] 2025-10-12 21:22:45,550 | INFO     | monitor loop #210: job 0:6840082361 is in state 'finished'
[2025-10-12 21:23:20] 2025-10-12 21:22:45,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,164 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 21:23:20] 2025-10-12 21:22:46,224 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2313.9434843749996
[2025-10-12 21:23:20] 2025-10-12 21:22:46,316 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6840082361/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,317 | INFO     | extracted standard info from prmon json
[2025-10-12 21:23:20] 2025-10-12 21:22:46,317 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:23:20] 2025-10-12 21:22:46,317 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:23:20] 2025-10-12 21:22:46,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:23:20] 2025-10-12 21:22:46,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:23:20] 2025-10-12 21:22:46,319 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:23:20] 2025-10-12 21:22:46,319 | INFO     | sum of square deviations: 21358540.0
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | sum of deviations: 244648368.99999997
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | mean x: 1760302792.0
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | mean y: 2667858.926829268
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | -- intersect: -20160470960.905716
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | intersect: -20160470960.905716
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | chi2: 0.0011069186650897193
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | -- intersect: -20160470960.905716
[2025-10-12 21:23:20] 2025-10-12 21:22:46,320 | INFO     | current memory leak: 11.45 B/s (using 41 data points, chi2=0.00)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | could have reported an average CPU frequency of 2347 MHz (5 samples)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | ..............................
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . Timing measurements:
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . get job = 0 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . initial setup = 1 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . payload setup = 8 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . stage-in = 0 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . payload execution = 2890 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . stage-out = 0 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,321 | INFO     | . log creation = 0 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,322 | INFO     | ..............................
[2025-10-12 21:23:20] 2025-10-12 21:22:46,352 | INFO     | time since job start (2933s) is within the limit (172800.0s)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,420 | INFO     | 
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | job summary report
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | --------------------------------------------------
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | PanDA job id: 6840082361
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | task id: 46676269
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | errors: (none)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | pilot state: finished 
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | transexitcode: 0
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | exeerrorcode: 0
[2025-10-12 21:23:20] 2025-10-12 21:22:46,421 | INFO     | exeerrordiag: 
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | exitcode: 0
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | exitmsg: OK
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | cpuconsumptiontime: 30766 s
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | nevents: 400
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | neventsw: 0
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | pid: 3850681
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | pgrp: 3850681
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | corecount: 12
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | event service: False
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 2902: 2374510, 2904: 2383510, 2906: 2383566, 2915: 2383920}
[2025-10-12 21:23:20] 2025-10-12 21:22:46,422 | INFO     | --------------------------------------------------
[2025-10-12 21:23:20] 2025-10-12 21:22:46,423 | INFO     | 
[2025-10-12 21:23:20] 2025-10-12 21:22:46,423 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-10-12 21:23:20] 2025-10-12 21:22:46,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:23:20] 2025-10-12 21:22:46,454 | INFO     | job 6840082361 has completed (purged errors)
[2025-10-12 21:23:20] 2025-10-12 21:22:46,454 | INFO     | overall cleanup function is called
[2025-10-12 21:23:20] 2025-10-12 21:22:47,462 | INFO     | --- collectZombieJob: --- 10, [3850681]
[2025-10-12 21:23:20] 2025-10-12 21:22:47,463 | INFO     | zombie collector waiting for pid 3850681
[2025-10-12 21:23:20] 2025-10-12 21:22:47,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:23:20] 2025-10-12 21:22:47,463 | INFO     | collected zombie processes
[2025-10-12 21:23:20] 2025-10-12 21:22:47,463 | INFO     | will attempt to kill all subprocesses of pid=3850681
[2025-10-12 21:23:20] 2025-10-12 21:22:48,280 | INFO     | process IDs to be killed: [3850681] (in reverse order)
[2025-10-12 21:23:20] 2025-10-12 21:22:48,553 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:23:20] 2025-10-12 21:22:48,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:23:20] 2025-10-12 21:22:48,581 | INFO     | did not find any defunct processes belonging to 3850681
[2025-10-12 21:23:20] 2025-10-12 21:22:48,605 | INFO     | did not find any defunct processes belonging to 3850681
[2025-10-12 21:23:20] 2025-10-12 21:22:48,605 | INFO     | ready for new job
[2025-10-12 21:23:20] 2025-10-12 21:22:48,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:23:20] 2025-10-12 21:22:48,607 | INFO     | ***************************************
[2025-10-12 21:23:20] 2025-10-12 21:22:48,607 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:23:20] 2025-10-12 21:22:48,607 | INFO     | ***************************************
[2025-10-12 21:23:20] 2025-10-12 21:22:48,607 | INFO     | 
[2025-10-12 21:23:20] 2025-10-12 21:22:48,644 | INFO     | architecture information:
[2025-10-12 21:23:20] 2025-10-12 21:22:48,645 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:23:20] 2025-10-12 21:22:48,666 | INFO     | cat /etc/os-release:
[2025-10-12 21:23:20] NAME="CentOS Linux"
[2025-10-12 21:23:20] VERSION="7 (Core)"
[2025-10-12 21:23:20] ID="centos"
[2025-10-12 21:23:20] ID_LIKE="rhel fedora"
[2025-10-12 21:23:20] VERSION_ID="7"
[2025-10-12 21:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:23:20] ANSI_COLOR="0;31"
[2025-10-12 21:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:23:20] HOME_URL="https://www.centos.org/"
[2025-10-12 21:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:23:20] 
[2025-10-12 21:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:23:20] 
[2025-10-12 21:23:20] 2025-10-12 21:22:48,666 | INFO     | ***************************************
[2025-10-12 21:23:20] 2025-10-12 21:22:49,169 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-10-12 21:23:20] 2025-10-12 21:22:49,206 | INFO     | sufficient remaining disk space (1724405252096 B)
[2025-10-12 21:23:20] 2025-10-12 21:22:49,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:23:20] 2025-10-12 21:22:49,209 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:23:20] 2025-10-12 21:22:49,209 | INFO     | update_server=False
[2025-10-12 21:23:20] 2025-10-12 21:22:49,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:23:20] 2025-10-12 21:22:49,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:23:20] 2025-10-12 21:22:49,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:23:20] 2025-10-12 21:22:49,211 | INFO     | aborting loop
[2025-10-12 21:23:20] 2025-10-12 21:22:49,566 | INFO     | all payload control threads have been joined
[2025-10-12 21:23:20] 2025-10-12 21:22:50,215 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:50,215 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:50,274 | INFO     | all data control threads have been joined
[2025-10-12 21:23:20] 2025-10-12 21:22:50,410 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:50,411 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:50,486 | INFO     | all job control threads have been joined
[2025-10-12 21:23:20] 2025-10-12 21:22:50,571 | INFO     | [payload] control thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:50,714 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:50,883 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:51,214 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:51,278 | INFO     | [data] control thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:51,306 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:51,386 | INFO     | [job] validate thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:51,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:23:20] 2025-10-12 21:22:51,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:51,490 | INFO     | [job] control thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:51,772 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:52,430 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:52,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:23:20] 2025-10-12 21:22:56,642 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:23:20] 2025-10-12 21:22:57,214 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:23:20] 2025-10-12 21:22:59,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389488985920)>', '<ExcThread(monitor, started 140388924913408)>']
[2025-10-12 21:23:20] 2025-10-12 21:23:04,197 | INFO     | all workflow threads have been joined
[2025-10-12 21:23:20] 2025-10-12 21:23:04,197 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:23:20] 2025-10-12 21:23:04,197 | INFO     | traces error code: 0
[2025-10-12 21:23:20] 2025-10-12 21:23:04,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:23:20] 2025-10-12 21:23:20,469 | INFO     | PID=3842500 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:23:20] 2025-10-12 21:23:20,470 | INFO     | .. there are 17 such processes running
[2025-10-12 21:23:20] 2025-10-12 21:23:20,470 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:23:20] 2025-10-12 21:23:20,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:23:20] 2025-10-12 21:23:20,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:23:20] 2025-10-12 21:23:20,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:23:20] 2025-10-12 21:23:20,471 | INFO     | [monitor] control thread has ended
[2025-10-12 21:23:20] 2025-10-12 21:23:20,640 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:23:20] 2025-10-12 21:23:20,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:23:20] 2025-10-12 21:23:20,645 [wrapper] pilotpid: 3842500
[2025-10-12 21:23:20] 2025-10-12 21:23:20,648 [wrapper] Pilot exit status: 0
[2025-10-12 21:23:20] 2025-10-12 21:23:20,660 [wrapper] pandaids: 6840082361
[2025-10-12 21:23:20] 2025-10-12 21:23:20,800 [wrapper] cleanup supervisor_pilot     487 3842501
[2025-10-12 21:23:20] 2025-10-12 21:23:20,804 [wrapper] Test setup, not cleaning
[2025-10-12 21:23:20] 2025-10-12 21:23:20,807 [wrapper] apfmon messages muted
[2025-10-12 21:23:20] 2025-10-12 21:23:20,811 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:23:20] 2025-10-12 21:23:20,813 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:23:20]  *** Error codes and diagnostics ***
[2025-10-12 21:23:20]     "exeErrorCode": 0,
[2025-10-12 21:23:20]     "exeErrorDiag": "",
[2025-10-12 21:23:20]     "pilotErrorCode": 0,
[2025-10-12 21:23:20]     "pilotErrorDiag": "",
[2025-10-12 21:23:20]  *** Listing of results directory ***
[2025-10-12 21:23:20] total 401828
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc    557409 Oct 12 13:55 pilot3.tar.gz
[2025-10-12 21:23:20] -rwx------ 1 boinc boinc     36292 Oct 12 13:56 runpilot2-wrapper.sh
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:56 queuedata.json
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:23:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:33 run_atlas
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:33 job.xml
[2025-10-12 21:23:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:33 start_atlas.sh
[2025-10-12 21:23:20] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:33 shared
[2025-10-12 21:23:20] -rw-r--r-- 2 boinc boinc    569680 Oct 12 20:33 input.tar.gz
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc      9396 Oct 12 20:33 init_data.xml
[2025-10-12 21:23:20] -rw-r--r-- 2 boinc boinc 218880687 Oct 12 20:33 EVNT.46676267._004188.pool.root.1
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:33 boinc_setup_complete
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:33 boinc_lockfile
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc      2549 Oct 12 20:33 pandaJob.out
[2025-10-12 21:23:20] -rw------- 1 boinc boinc    975536 Oct 12 20:33 agis_schedconf.cvmfs.json
[2025-10-12 21:23:20] -rw------- 1 boinc boinc   1560580 Oct 12 20:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:23:20] drwx------ 5 boinc boinc      4096 Oct 12 20:33 pilot3
[2025-10-12 21:23:20] -rw------- 1 boinc boinc 187098274 Oct 12 21:21 HITS.46676269._080119.pool.root.1
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc       529 Oct 12 21:22 boinc_task_state.xml
[2025-10-12 21:23:20] -rw------- 1 boinc boinc      1028 Oct 12 21:22 memory_monitor_summary.json
[2025-10-12 21:23:20] -rw------- 1 boinc boinc    352459 Oct 12 21:22 log.46676269._080119.job.log.tgz.1
[2025-10-12 21:23:20] -rw------- 1 boinc boinc        95 Oct 12 21:22 pilot_heartbeat.json
[2025-10-12 21:23:20] -rw------- 1 boinc boinc      7744 Oct 12 21:22 heartbeat.json
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:23 wrapper_checkpoint.txt
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:23 boinc_mmap_file
[2025-10-12 21:23:20] -rw------- 1 boinc boinc       823 Oct 12 21:23 pilotlog.txt
[2025-10-12 21:23:20] -rw------- 1 boinc boinc    439354 Oct 12 21:23 log.46676269._080119.job.log.1
[2025-10-12 21:23:20] -rw------- 1 boinc boinc       357 Oct 12 21:23 output.list
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:23 runtime_log
[2025-10-12 21:23:20] -rw------- 1 boinc boinc    808960 Oct 12 21:23 result.tar.gz
[2025-10-12 21:23:20] -rw------- 1 boinc boinc       643 Oct 12 21:23 W6DODmPkBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm51TMDmZrICbn.diag
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc      8672 Oct 12 21:23 runtime_log.err
[2025-10-12 21:23:20] -rw-r--r-- 1 boinc boinc     22028 Oct 12 21:23 stderr.txt
[2025-10-12 21:23:20] HITS file was successfully produced:
[2025-10-12 21:23:20] -rw------- 1 boinc boinc 187098274 Oct 12 21:21 shared/HITS.pool.root.1
[2025-10-12 21:23:20]  *** Contents of shared directory: ***
[2025-10-12 21:23:20] total 397844
[2025-10-12 21:23:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:33 start_atlas.sh
[2025-10-12 21:23:20] -rw-r--r-- 2 boinc boinc    569680 Oct 12 20:33 input.tar.gz
[2025-10-12 21:23:20] -rw-r--r-- 2 boinc boinc 218880687 Oct 12 20:33 ATLAS.root_0
[2025-10-12 21:23:20] -rw------- 1 boinc boinc 187098274 Oct 12 21:21 HITS.pool.root.1
[2025-10-12 21:23:20] -rw------- 1 boinc boinc    808960 Oct 12 21:23 result.tar.gz
21:23:22 (3837769): run_atlas exited; CPU time 30935.098073
21:23:22 (3837769): called boinc_finish(0)

</stderr_txt>
]]>

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