Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:47:39 (22741): wrapper (7.7.26015): starting
15:47:39 (22741): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:47:39] Arguments: --nthreads 8
[2025-10-12 15:47:39] Threads: 8
[2025-10-12 15:47:39] Checking for CVMFS
[2025-10-12 15:47:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:47:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:47:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:47:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:47:40] 2.11.2.0 2797 1354 64616 151635 1 56 13709100 20275200 1 130560 0 937687 99.990 47721 35296 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:47:40] CVMFS is ok
[2025-10-12 15:47:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:47:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:47:40] Further information can be found at the LHC@home message board.
[2025-10-12 15:47:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:47:40] Checking for apptainer binary...
[2025-10-12 15:47:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:47:40] Running /usr/bin/apptainer --version
[2025-10-12 15:47:40] apptainer version 1.3.2-1.el7
[2025-10-12 15:47:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:47:41] c-204-11.aglt2.org
[2025-10-12 15:47:41] apptainer works
[2025-10-12 15:47:41] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:47:41] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:47:41] Starting ATLAS job with PandaID=6840531964
[2025-10-12 15:47:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:28:07 (7047): wrapper (7.7.26015): starting
16:28:07 (7047): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:28:07] Arguments: --nthreads 8
[2025-10-12 16:28:07] Threads: 8
[2025-10-12 16:28:07] This job has been restarted, cleaning up previous attempt
[2025-10-12 16:28:07] Checking for CVMFS
[2025-10-12 16:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:28:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:28:07] 2.11.2.0 2797 1394 65188 151636 0 18 13746580 20275200 1 130560 0 1003703 99.990 49020 35470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:28:07] CVMFS is ok
[2025-10-12 16:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:28:07] Further information can be found at the LHC@home message board.
[2025-10-12 16:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:28:07] Checking for apptainer binary...
[2025-10-12 16:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:28:07] Running /usr/bin/apptainer --version
[2025-10-12 16:28:07] apptainer version 1.3.2-1.el7
[2025-10-12 16:28:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:28:09] c-204-11.aglt2.org
[2025-10-12 16:28:09] apptainer works
[2025-10-12 16:28:09] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:28:09] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:28:09] Starting ATLAS job with PandaID=6840531964
[2025-10-12 16:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:36:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:36:50] 2025-10-12 22:36:18,655 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:36:50] 2025-10-12 22:36:18,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:36:50] 2025-10-12 22:36:18,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:36:50] 2025-10-12 22:36:18,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:36:50] 2025-10-12 22:36:18,660 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:36:50] 2025-10-12 22:36:18,660 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 18:36:50] 2025-10-12 22:36:18,661 | INFO     | sum of deviations: -13203406781.499996
[2025-10-12 18:36:50] 2025-10-12 22:36:18,661 | INFO     | mean x: 1760304749.5
[2025-10-12 18:36:50] 2025-10-12 22:36:18,661 | INFO     | mean y: 2566360.626984127
[2025-10-12 18:36:50] 2025-10-12 22:36:18,662 | INFO     | -- intersect: 37474936332.74374
[2025-10-12 18:36:50] 2025-10-12 22:36:18,662 | INFO     | intersect: 37474936332.74374
[2025-10-12 18:36:50] 2025-10-12 22:36:18,662 | INFO     | chi2: 2.472842708761048
[2025-10-12 18:36:50] 2025-10-12 22:36:18,662 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,663 | INFO     | sum of deviations: -3814693011.000004
[2025-10-12 18:36:50] 2025-10-12 22:36:18,663 | INFO     | mean x: 1760304597.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,663 | INFO     | mean y: 2585963.1570247933
[2025-10-12 18:36:50] 2025-10-12 22:36:18,664 | INFO     | -- intersect: 12227408005.47068
[2025-10-12 18:36:50] 2025-10-12 22:36:18,664 | INFO     | intersect: 12227408005.47068
[2025-10-12 18:36:50] 2025-10-12 22:36:18,664 | INFO     | chi2: 1.7174588487857132
[2025-10-12 18:36:50] 2025-10-12 22:36:18,664 | INFO     | current chi2=1.7174588487857132 (change=30.54718592893439 %)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,664 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,665 | INFO     | sum of deviations: -2970307099.000002
[2025-10-12 18:36:50] 2025-10-12 22:36:18,665 | INFO     | mean x: 1760304444.5
[2025-10-12 18:36:50] 2025-10-12 22:36:18,665 | INFO     | mean y: 2587935.5862068967
[2025-10-12 18:36:50] 2025-10-12 22:36:18,665 | INFO     | -- intersect: 10806201050.368416
[2025-10-12 18:36:50] 2025-10-12 22:36:18,665 | INFO     | intersect: 10806201050.368416
[2025-10-12 18:36:50] 2025-10-12 22:36:18,666 | INFO     | chi2: 1.7192621654147615
[2025-10-12 18:36:50] 2025-10-12 22:36:18,666 | INFO     | current chi2=1.7192621654147615 (change=-0.10499911717380031 %)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,666 | INFO     | right removable region: 115
[2025-10-12 18:36:50] 2025-10-12 22:36:18,666 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,667 | INFO     | sum of deviations: -33330532614.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,667 | INFO     | mean x: 1760304902.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,667 | INFO     | mean y: 2608861.644628099
[2025-10-12 18:36:50] 2025-10-12 22:36:18,667 | INFO     | -- intersect: 106815896118.4312
[2025-10-12 18:36:50] 2025-10-12 22:36:18,667 | INFO     | intersect: 106815896118.4312
[2025-10-12 18:36:50] 2025-10-12 22:36:18,667 | INFO     | chi2: 0.9154121996107643
[2025-10-12 18:36:50] 2025-10-12 22:36:18,668 | INFO     | current chi2=0.9154121996107643 (change=62.981381857910115 %)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,668 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,668 | INFO     | sum of deviations: -31945629026.5
[2025-10-12 18:36:50] 2025-10-12 22:36:18,668 | INFO     | mean x: 1760305054.5
[2025-10-12 18:36:50] 2025-10-12 22:36:18,669 | INFO     | mean y: 2605527.1120689656
[2025-10-12 18:36:50] 2025-10-12 22:36:18,669 | INFO     | -- intersect: 116195418190.9843
[2025-10-12 18:36:50] 2025-10-12 22:36:18,669 | INFO     | intersect: 116195418190.9843
[2025-10-12 18:36:50] 2025-10-12 22:36:18,669 | INFO     | chi2: 0.8989433987001534
[2025-10-12 18:36:50] 2025-10-12 22:36:18,669 | INFO     | current chi2=0.8989433987001534 (change=1.799058491640536 %)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,669 | INFO     | left removable region: 20
[2025-10-12 18:36:50] 2025-10-12 22:36:18,670 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,670 | INFO     | sum of deviations: -15548517285.999998
[2025-10-12 18:36:50] 2025-10-12 22:36:18,670 | INFO     | mean x: 1760305024.0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,670 | INFO     | mean y: 2616469.263157895
[2025-10-12 18:36:50] 2025-10-12 22:36:18,670 | INFO     | -- intersect: 102964337520.03128
[2025-10-12 18:36:50] 2025-10-12 22:36:18,671 | INFO     | intersect: 102964337520.03128
[2025-10-12 18:36:50] 2025-10-12 22:36:18,671 | INFO     | chi2: 0.09187829980767687
[2025-10-12 18:36:50] 2025-10-12 22:36:18,671 | INFO     | -- intersect: 102964337520.03128
[2025-10-12 18:36:50] 2025-10-12 22:36:18,671 | INFO     | current memory leak: -58.49 B/s (using 95 data points, chi2=0.09)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,671 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | ..............................
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . Timing measurements:
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . get job = 0 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . initial setup = 1 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . payload setup = 8 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . stage-in = 0 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . payload execution = 7635 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . stage-out = 0 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,672 | INFO     | . log creation = 0 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,673 | INFO     | ..............................
[2025-10-12 18:36:50] 2025-10-12 22:36:18,767 | INFO     | 
[2025-10-12 18:36:50] 2025-10-12 22:36:18,767 | INFO     | job summary report
[2025-10-12 18:36:50] 2025-10-12 22:36:18,767 | INFO     | --------------------------------------------------
[2025-10-12 18:36:50] 2025-10-12 22:36:18,767 | INFO     | PanDA job id: 6840531964
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | task id: 46676269
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | errors: (none)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | pilot state: finished 
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | transexitcode: 0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | exeerrorcode: 0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | exeerrordiag: 
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | exitcode: 0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,768 | INFO     | exitmsg: OK
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | cpuconsumptiontime: 56417 s
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | nevents: 400
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | neventsw: 0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | pid: 17136
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | pgrp: 17136
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | corecount: 8
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | event service: False
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 7647: 2376750, 7648: 2376749, 7649: 2385987, 7656: 2386125}
[2025-10-12 18:36:50] 2025-10-12 22:36:18,769 | INFO     | --------------------------------------------------
[2025-10-12 18:36:50] 2025-10-12 22:36:18,770 | INFO     | 
[2025-10-12 18:36:50] 2025-10-12 22:36:18,770 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:36:50] 2025-10-12 22:36:18,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,802 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,802 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:36:50] 2025-10-12 22:36:18,802 | INFO     | job 6840531964 has completed (purged errors)
[2025-10-12 18:36:50] 2025-10-12 22:36:18,803 | INFO     | overall cleanup function is called
[2025-10-12 18:36:50] 2025-10-12 22:36:19,810 | INFO     | --- collectZombieJob: --- 10, [17136]
[2025-10-12 18:36:50] 2025-10-12 22:36:19,811 | INFO     | zombie collector waiting for pid 17136
[2025-10-12 18:36:50] 2025-10-12 22:36:19,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:36:50] 2025-10-12 22:36:19,811 | INFO     | collected zombie processes
[2025-10-12 18:36:50] 2025-10-12 22:36:19,812 | INFO     | will attempt to kill all subprocesses of pid=17136
[2025-10-12 18:36:50] 2025-10-12 22:36:19,905 | INFO     | process IDs to be killed: [17136] (in reverse order)
[2025-10-12 18:36:50] 2025-10-12 22:36:19,968 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:36:50] 2025-10-12 22:36:19,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:36:50] 2025-10-12 22:36:19,973 | INFO     | did not find any defunct processes belonging to 17136
[2025-10-12 18:36:50] 2025-10-12 22:36:19,976 | INFO     | did not find any defunct processes belonging to 17136
[2025-10-12 18:36:50] 2025-10-12 22:36:19,976 | INFO     | ready for new job
[2025-10-12 18:36:50] 2025-10-12 22:36:19,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:36:50] 2025-10-12 22:36:19,979 | INFO     | ***************************************
[2025-10-12 18:36:50] 2025-10-12 22:36:19,979 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:36:50] 2025-10-12 22:36:19,979 | INFO     | ***************************************
[2025-10-12 18:36:50] 2025-10-12 22:36:19,979 | INFO     | 
[2025-10-12 18:36:50] 2025-10-12 22:36:19,980 | INFO     | architecture information:
[2025-10-12 18:36:50] 2025-10-12 22:36:19,981 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:36:50] 2025-10-12 22:36:19,999 | INFO     | cat /etc/os-release:
[2025-10-12 18:36:50] NAME="CentOS Linux"
[2025-10-12 18:36:50] VERSION="7 (Core)"
[2025-10-12 18:36:50] ID="centos"
[2025-10-12 18:36:50] ID_LIKE="rhel fedora"
[2025-10-12 18:36:50] VERSION_ID="7"
[2025-10-12 18:36:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:36:50] ANSI_COLOR="0;31"
[2025-10-12 18:36:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:36:50] HOME_URL="https://www.centos.org/"
[2025-10-12 18:36:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:36:50] 
[2025-10-12 18:36:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:36:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:36:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:36:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:36:50] 
[2025-10-12 18:36:50] 2025-10-12 22:36:20,000 | INFO     | ***************************************
[2025-10-12 18:36:50] 2025-10-12 22:36:20,503 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:36:50] 2025-10-12 22:36:20,524 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-10-12 18:36:50] 2025-10-12 22:36:20,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:36:50] 2025-10-12 22:36:20,525 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:36:50] 2025-10-12 22:36:20,525 | INFO     | update_server=False
[2025-10-12 18:36:50] 2025-10-12 22:36:20,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:36:50] 2025-10-12 22:36:20,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:36:50] 2025-10-12 22:36:20,526 | INFO     | aborting loop
[2025-10-12 18:36:50] 2025-10-12 22:36:20,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:36:50] 2025-10-12 22:36:20,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:36:50] 2025-10-12 22:36:20,543 | INFO     | all job control threads have been joined
[2025-10-12 18:36:50] 2025-10-12 22:36:21,161 | INFO     | all data control threads have been joined
[2025-10-12 18:36:50] 2025-10-12 22:36:21,526 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:21,529 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:21,532 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:21,548 | INFO     | [job] control thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:21,662 | INFO     | all payload control threads have been joined
[2025-10-12 18:36:50] 2025-10-12 22:36:21,750 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,021 | INFO     | [job] validate thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,115 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,126 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,166 | INFO     | [data] control thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:36:50] 2025-10-12 22:36:22,258 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,532 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,668 | INFO     | [payload] control thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,827 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:22,972 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:26,204 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:36:50] 2025-10-12 22:36:37,625 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:36:50] 2025-10-12 22:36:39,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033644554048)>', '<ExcThread(monitor, started 140032811710208)>']
[2025-10-12 18:36:50] 2025-10-12 22:36:44,265 | INFO     | all workflow threads have been joined
[2025-10-12 18:36:50] 2025-10-12 22:36:44,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:36:50] 2025-10-12 22:36:44,269 | INFO     | traces error code: 0
[2025-10-12 18:36:50] 2025-10-12 22:36:44,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:36:50] 2025-10-12 22:36:50,439 | INFO     | PID=10772 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:36:50] 2025-10-12 22:36:50,439 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:36:50] 2025-10-12 22:36:50,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:36:50] 2025-10-12 22:36:50,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:36:50] 2025-10-12 22:36:50,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:36:50] 2025-10-12 22:36:50,440 | INFO     | [monitor] control thread has ended
[2025-10-12 18:36:50] 2025-10-12 22:36:50,544 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:36:50] 2025-10-12 22:36:50,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:36:50] 2025-10-12 22:36:50,552 [wrapper] pilotpid: 10772
[2025-10-12 18:36:50] 2025-10-12 22:36:50,556 [wrapper] Pilot exit status: 0
[2025-10-12 18:36:50] 2025-10-12 22:36:50,575 [wrapper] pandaids: 6840531964 6840531964
[2025-10-12 18:36:50] 2025-10-12 22:36:50,620 [wrapper] cleanup supervisor_pilot 15803 10773
[2025-10-12 18:36:50] 2025-10-12 22:36:50,625 [wrapper] Test setup, not cleaning
[2025-10-12 18:36:50] 2025-10-12 22:36:50,630 [wrapper] apfmon messages muted
[2025-10-12 18:36:50] 2025-10-12 22:36:50,635 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:36:50] 2025-10-12 22:36:50,640 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:36:50]  *** Error codes and diagnostics ***
[2025-10-12 18:36:50]     "exeErrorCode": 0,
[2025-10-12 18:36:50]     "exeErrorDiag": "",
[2025-10-12 18:36:50]     "pilotErrorCode": 0,
[2025-10-12 18:36:50]     "pilotErrorDiag": "",
[2025-10-12 18:36:50]  *** Listing of results directory ***
[2025-10-12 18:36:50] total 639280
[2025-10-12 18:36:50] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 18:36:50] -rwx------ 1 boincer umatlas     36292 Oct 12 14:20 runpilot2-wrapper.sh
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:20 queuedata.json
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:36:50] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:47 run_atlas
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:47 job.xml
[2025-10-12 18:36:50] -rw-r--r-- 3 boincer umatlas 223525208 Oct 12 15:47 EVNT.46676267._004399.pool.root.1
[2025-10-12 18:36:50] -rw-r--r-- 3 boincer umatlas 223525208 Oct 12 15:47 ATLAS.root_0
[2025-10-12 18:36:50] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 15:47 input.tar.gz
[2025-10-12 18:36:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:47 start_atlas.sh
[2025-10-12 18:36:50] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:47 shared
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:47 boinc_lockfile
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas   1560580 Oct 12 15:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 16:28 pandaJob.out
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas    975536 Oct 12 16:28 agis_schedconf.cvmfs.json
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 18:27 init_data.xml
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas 200762320 Oct 12 18:35 HITS.46676269._085985.pool.root.1
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas       529 Oct 12 18:35 boinc_task_state.xml
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas      1049 Oct 12 18:36 memory_monitor_summary.json
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas    373676 Oct 12 18:36 log.46676269._085985.job.log.tgz.1
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas        96 Oct 12 18:36 pilot_heartbeat.json
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas      7849 Oct 12 18:36 heartbeat.json
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas        27 Oct 12 18:36 wrapper_checkpoint.txt
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:36 boinc_mmap_file
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas       745 Oct 12 18:36 pilotlog.txt
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas   1080127 Oct 12 18:36 log.46676269._085985.job.log.1
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas       357 Oct 12 18:36 output.list
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:36 runtime_log
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas   1474560 Oct 12 18:36 result.tar.gz
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas      8788 Oct 12 18:36 runtime_log.err
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas       784 Oct 12 18:36 GMPKDmSrFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm1kNDmdXS6Vm.diag
[2025-10-12 18:36:50] -rw-r--r-- 1 boincer umatlas     23010 Oct 12 18:36 stderr.txt
[2025-10-12 18:36:50] HITS file was successfully produced:
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas 200762320 Oct 12 18:35 shared/HITS.pool.root.1
[2025-10-12 18:36:50]  *** Contents of shared directory: ***
[2025-10-12 18:36:50] total 416368
[2025-10-12 18:36:50] -rw-r--r-- 3 boincer umatlas 223525208 Oct 12 15:47 ATLAS.root_0
[2025-10-12 18:36:50] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 15:47 input.tar.gz
[2025-10-12 18:36:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:47 start_atlas.sh
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas 200762320 Oct 12 18:35 HITS.pool.root.1
[2025-10-12 18:36:50] -rw------- 1 boincer umatlas   1474560 Oct 12 18:36 result.tar.gz
18:36:52 (7047): run_atlas exited; CPU time 56430.631099
18:36:52 (7047): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN