Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:12:50 (2928477): wrapper (7.7.26015): starting
12:12:50 (2928477): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 12:12:50] Arguments: --nthreads 3
[2025-10-13 12:12:50] Threads: 3
[2025-10-13 12:12:50] Checking for CVMFS
[2025-10-13 12:12:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:12:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:12:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:12:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:12:51] 2.9.2.0 193215 9979 87160 151658 3 9 4321831 36864000 12 130560 0 7199981 99.990 340756 848 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:12:51] CVMFS is ok
[2025-10-13 12:12:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:12:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:12:51] Further information can be found at the LHC@home message board.
[2025-10-13 12:12:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:12:51] Checking for apptainer binary...
[2025-10-13 12:12:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:12:51] Running /usr/bin/apptainer --version
[2025-10-13 12:12:51] apptainer version 1.4.1-1.1
[2025-10-13 12:12:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:12:51] thA383
[2025-10-13 12:12:51] apptainer works
[2025-10-13 12:12:51] Set ATHENA_PROC_NUMBER=3
[2025-10-13 12:12:51] Set ATHENA_CORE_NUMBER=3
[2025-10-13 12:12:51] Starting ATLAS job with PandaID=6840531930
[2025-10-13 12:12:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:34:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:34:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:34:08] ANSI_COLOR="0;31"
[2025-10-13 13:34:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:34:08] HOME_URL="https://www.centos.org/"
[2025-10-13 13:34:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:34:08] 
[2025-10-13 13:34:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:34:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:34:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:34:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:34:08] 
[2025-10-13 13:34:08] 2025-10-13 11:33:56,329 | INFO     | ***************************************
[2025-10-13 13:34:08] 2025-10-13 11:33:56,832 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 13:34:08] 2025-10-13 11:33:56,845 | INFO     | sufficient remaining disk space (255378587648 B)
[2025-10-13 13:34:08] 2025-10-13 11:33:56,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:34:08] 2025-10-13 11:33:56,845 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:34:08] 2025-10-13 11:33:56,845 | INFO     | update_server=False
[2025-10-13 13:34:08] 2025-10-13 11:33:56,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:34:08] 2025-10-13 11:33:56,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:34:08] 2025-10-13 11:33:56,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:34:08] 2025-10-13 11:33:56,846 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 13:34:08] 2025-10-13 11:33:56,846 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:34:08] 2025-10-13 11:33:56,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:34:08] 2025-10-13 11:33:56,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:34:08] 2025-10-13 11:33:56,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:34:08] 2025-10-13 11:33:56,966 | INFO     | aborting loop
[2025-10-13 13:34:08] 2025-10-13 11:33:57,089 | INFO     | all payload control threads have been joined
[2025-10-13 13:34:08] 2025-10-13 11:33:57,442 | INFO     | all job control threads have been joined
[2025-10-13 13:34:08] 2025-10-13 11:33:57,529 | INFO     | all data control threads have been joined
[2025-10-13 13:34:08] 2025-10-13 11:33:57,851 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:57,851 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:57,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:34:08] 2025-10-13 11:33:57,919 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:57,972 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,091 | INFO     | [payload] control thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,253 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,355 | INFO     | [job] validate thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,443 | INFO     | [job] control thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,450 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,485 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,531 | INFO     | [data] control thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:58,804 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:59,249 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:59,263 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:33:59,917 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:34:00,852 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:34:08] 2025-10-13 11:34:03,419 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:34:08] 2025-10-13 11:34:03,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832566781760)>', '<ExcThread(monitor, started 139832214923008)>']
[2025-10-13 13:34:08] 2025-10-13 11:34:03,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:34:08] 2025-10-13 11:34:03,883 | INFO     | [monitor] control thread has ended
[2025-10-13 13:34:08] 2025-10-13 11:34:08,675 | INFO     | all workflow threads have been joined
[2025-10-13 13:34:08] 2025-10-13 11:34:08,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:34:08] 2025-10-13 11:34:08,676 | INFO     | traces error code: 0
[2025-10-13 13:34:08] 2025-10-13 11:34:08,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:34:08] 2025-10-13 11:34:08,725 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:34:08] 2025-10-13 11:34:08,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:34:08] 2025-10-13 11:34:08,729 [wrapper] pilotpid: 2932192
[2025-10-13 13:34:08] 2025-10-13 11:34:08,732 [wrapper] Pilot exit status: 0
[2025-10-13 13:34:08] 2025-10-13 11:34:08,739 [wrapper] pandaids: 6840531930
[2025-10-13 13:34:08] 2025-10-13 11:34:08,754 [wrapper] cleanup supervisor_pilot 2950410 2932193
[2025-10-13 13:34:08] 2025-10-13 11:34:08,757 [wrapper] Test setup, not cleaning
[2025-10-13 13:34:08] 2025-10-13 11:34:08,759 [wrapper] apfmon messages muted
[2025-10-13 13:34:08] 2025-10-13 11:34:08,761 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:34:08] 2025-10-13 11:34:08,763 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:34:08]  *** Error codes and diagnostics ***
[2025-10-13 13:34:08]     "exeErrorCode": 0,
[2025-10-13 13:34:08]     "exeErrorDiag": "",
[2025-10-13 13:34:08]     "pilotErrorCode": 0,
[2025-10-13 13:34:08]     "pilotErrorDiag": "",
[2025-10-13 13:34:08]  *** Listing of results directory ***
[2025-10-13 13:34:08] total 403176
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc    557409 Oct 12 19:57 pilot3.tar.gz
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:19 queuedata.json
[2025-10-13 13:34:08] -rwx------ 1 boinc boinc     36292 Oct 12 20:20 runpilot2-wrapper.sh
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:34:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:12 run_atlas
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:12 job.xml
[2025-10-13 13:34:08] -rw-r--r-- 2 boinc boinc 218139583 Oct 13 12:12 EVNT.46676267._004398.pool.root.1
[2025-10-13 13:34:08] -rw-r--r-- 2 boinc boinc    569687 Oct 13 12:12 input.tar.gz
[2025-10-13 13:34:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:12 start_atlas.sh
[2025-10-13 13:34:08] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:12 shared
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:12 boinc_setup_complete
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc      6437 Oct 13 12:12 init_data.xml
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:12 boinc_lockfile
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc      2549 Oct 13 12:12 pandaJob.out
[2025-10-13 13:34:08] -rw------- 1 boinc boinc    972497 Oct 13 12:12 agis_schedconf.cvmfs.json
[2025-10-13 13:34:08] -rw------- 1 boinc boinc   1560580 Oct 13 12:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:34:08] drwx------ 5 boinc boinc      4096 Oct 13 12:12 pilot3
[2025-10-13 13:34:08] -rw------- 1 boinc boinc        95 Oct 13 13:33 pilot_heartbeat.json
[2025-10-13 13:34:08] -rw------- 1 boinc boinc 188902717 Oct 13 13:33 HITS.46676269._085951.pool.root.1
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:33 boinc_task_state.xml
[2025-10-13 13:34:08] -rw------- 1 boinc boinc      1016 Oct 13 13:33 memory_monitor_summary.json
[2025-10-13 13:34:08] -rw------- 1 boinc boinc    244804 Oct 13 13:33 log.46676269._085951.job.log.tgz.1
[2025-10-13 13:34:08] -rw------- 1 boinc boinc      7758 Oct 13 13:33 heartbeat.json
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:33 boinc_mmap_file
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:33 wrapper_checkpoint.txt
[2025-10-13 13:34:08] -rw------- 1 boinc boinc      4556 Oct 13 13:34 pilotlog.txt
[2025-10-13 13:34:08] -rw------- 1 boinc boinc    714367 Oct 13 13:34 log.46676269._085951.job.log.1
[2025-10-13 13:34:08] -rw------- 1 boinc boinc       357 Oct 13 13:34 output.list
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:34 runtime_log
[2025-10-13 13:34:08] -rw------- 1 boinc boinc    983040 Oct 13 13:34 result.tar.gz
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc      8777 Oct 13 13:34 runtime_log.err
[2025-10-13 13:34:08] -rw------- 1 boinc boinc       658 Oct 13 13:34 A8JODmRrFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmb1kNDmUEsBEo.diag
[2025-10-13 13:34:08] -rw-r--r-- 1 boinc boinc      8428 Oct 13 13:34 stderr.txt
[2025-10-13 13:34:08] HITS file was successfully produced:
[2025-10-13 13:34:08] -rw------- 1 boinc boinc 188902717 Oct 13 13:33 shared/HITS.pool.root.1
[2025-10-13 13:34:08]  *** Contents of shared directory: ***
[2025-10-13 13:34:08] total 399048
[2025-10-13 13:34:08] -rw-r--r-- 2 boinc boinc 218139583 Oct 13 12:12 ATLAS.root_0
[2025-10-13 13:34:08] -rw-r--r-- 2 boinc boinc    569687 Oct 13 12:12 input.tar.gz
[2025-10-13 13:34:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:12 start_atlas.sh
[2025-10-13 13:34:08] -rw------- 1 boinc boinc 188902717 Oct 13 13:33 HITS.pool.root.1
[2025-10-13 13:34:08] -rw------- 1 boinc boinc    983040 Oct 13 13:34 result.tar.gz
13:34:10 (2928477): run_atlas exited; CPU time 13883.198825
13:34:10 (2928477): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN