Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:42:53 (2744): wrapper (7.7.26015): starting
15:42:53 (2744): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:42:53] Arguments: --nthreads 8
[2025-10-12 15:42:53] Threads: 8
[2025-10-12 15:42:53] Checking for CVMFS
[2025-10-12 15:42:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:42:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:42:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:42:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:42:53] 2.11.2.0 25047 53184 115036 151635 0 61 15262023 20275201 917 130560 0 63596036 99.979 2406883 24022 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:42:53] CVMFS is ok
[2025-10-12 15:42:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:42:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:42:53] Further information can be found at the LHC@home message board.
[2025-10-12 15:42:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:42:53] Checking for apptainer binary...
[2025-10-12 15:42:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:42:53] Running /usr/bin/apptainer --version
[2025-10-12 15:42:54] apptainer version 1.3.2-1.el7
[2025-10-12 15:42:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:42:54] c-205-37.aglt2.org
[2025-10-12 15:42:54] apptainer works
[2025-10-12 15:42:54] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:42:54] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:42:54] Starting ATLAS job with PandaID=6840531928
[2025-10-12 15:42:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:48:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:48:40]  storage_token=
[2025-10-12 16:48:40]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6840531928/log.46676269._085949.job.log.tgz.1
[2025-10-12 16:48:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/9c/log.46676269._085949.job.log.tgz.1
[2025-10-12 16:48:40]  workdir=None
[2025-10-12 16:48:40] ]
[2025-10-12 16:48:40] 2025-10-12 20:47:59,977 | INFO     | transferring file log.46676269._085949.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840531928/log.46676269._085949.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 16:48:40] 2025-10-12 20:47:59,977 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840531928/log.46676269._085949.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._085949.job
[2025-10-12 16:48:40] 2025-10-12 20:47:59,997 | INFO     | adding to output.list: log.46676269._085949.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/9c/log.46676269._085949.job.log.tg
[2025-10-12 16:48:40] 2025-10-12 20:47:59,998 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:48:40] 2025-10-12 20:47:59,998 | INFO     | summary of transferred files:
[2025-10-12 16:48:40] 2025-10-12 20:47:59,999 | INFO     |  -- lfn=log.46676269._085949.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:48:40] 2025-10-12 20:47:59,999 | INFO     | stage-out finished correctly
[2025-10-12 16:48:40] 2025-10-12 20:48:00,077 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:48:40] 2025-10-12 20:48:00,704 | INFO     | time since job start (3893s) is within the limit (172800.0s)
[2025-10-12 16:48:40] 2025-10-12 20:48:01,651 | INFO     | monitor loop #291: job 0:6840531928 is in state 'finished'
[2025-10-12 16:48:40] 2025-10-12 20:48:01,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:48:40] 2025-10-12 20:48:02,710 | INFO     | time since job start (3895s) is within the limit (172800.0s)
[2025-10-12 16:48:40] 2025-10-12 20:48:03,000 | INFO     | job 6840531928 has state=finished
[2025-10-12 16:48:40] 2025-10-12 20:48:03,000 | INFO     | preparing for final server update for job 6840531928 in state='finished'
[2025-10-12 16:48:40] 2025-10-12 20:48:03,001 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:48:40] 2025-10-12 20:48:03,001 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:48:40] 2025-10-12 20:48:03,001 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:48:40] 2025-10-12 20:48:03,002 | INFO     | job 6840531928 has finished - writing final server update
[2025-10-12 16:48:40] 2025-10-12 20:48:03,002 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:48:40] 2025-10-12 20:48:03,003 | INFO     | executing command: lscpu
[2025-10-12 16:48:40] 2025-10-12 20:48:03,038 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:48:40] 2025-10-12 20:48:04,155 | INFO     | monitor loop #292: job 0:6840531928 is in state 'finished'
[2025-10-12 16:48:40] 2025-10-12 20:48:04,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:48:40] 2025-10-12 20:48:04,715 | INFO     | time since job start (3897s) is within the limit (172800.0s)
[2025-10-12 16:48:40] 2025-10-12 20:48:06,656 | INFO     | monitor loop #293: job 0:6840531928 is in state 'finished'
[2025-10-12 16:48:40] 2025-10-12 20:48:06,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:48:40] 2025-10-12 20:48:06,720 | INFO     | time since job start (3899s) is within the limit (172800.0s)
[2025-10-12 16:48:40] 2025-10-12 20:48:07,034 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:48:40] 2025-10-12 20:48:07,039 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2104.558875
[2025-10-12 16:48:40] 2025-10-12 20:48:07,042 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840531928/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:48:40] 2025-10-12 20:48:07,043 | INFO     | extracted standard info from prmon json
[2025-10-12 16:48:40] 2025-10-12 20:48:07,043 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:48:40] 2025-10-12 20:48:07,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:48:40] 2025-10-12 20:48:07,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:48:40] 2025-10-12 20:48:07,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:48:40] 2025-10-12 20:48:07,046 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:48:40] 2025-10-12 20:48:07,046 | INFO     | sum of square deviations: 57407588.0
[2025-10-12 16:48:40] 2025-10-12 20:48:07,046 | INFO     | sum of deviations: -5937861207.000001
[2025-10-12 16:48:40] 2025-10-12 20:48:07,047 | INFO     | mean x: 1760300225.0
[2025-10-12 16:48:40] 2025-10-12 20:48:07,047 | INFO     | mean y: 2638004.754385965
[2025-10-12 16:48:40] 2025-10-12 20:48:07,047 | INFO     | -- intersect: 182076450593.7953
[2025-10-12 16:48:40] 2025-10-12 20:48:07,047 | INFO     | intersect: 182076450593.7953
[2025-10-12 16:48:40] 2025-10-12 20:48:07,047 | INFO     | chi2: 0.03613637943624384
[2025-10-12 16:48:40] 2025-10-12 20:48:07,047 | INFO     | -- intersect: 182076450593.7953
[2025-10-12 16:48:40] 2025-10-12 20:48:07,047 | INFO     | current memory leak: -103.43 B/s (using 57 data points, chi2=0.04)
[2025-10-12 16:48:40] 2025-10-12 20:48:07,048 | INFO     | could have reported an average CPU frequency of 2267 MHz (6 samples)
[2025-10-12 16:48:40] 2025-10-12 20:48:07,048 | INFO     | ..............................
[2025-10-12 16:48:40] 2025-10-12 20:48:07,048 | INFO     | . Timing measurements:
[2025-10-12 16:48:40] 2025-10-12 20:48:07,048 | INFO     | . get job = 0 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,048 | INFO     | . initial setup = 2 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,048 | INFO     | . payload setup = 5 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,049 | INFO     | . stage-in = 0 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,049 | INFO     | . payload execution = 3866 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,049 | INFO     | . stage-out = 0 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,049 | INFO     | . log creation = 0 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,049 | INFO     | ..............................
[2025-10-12 16:48:40] 2025-10-12 20:48:07,126 | INFO     | 
[2025-10-12 16:48:40] 2025-10-12 20:48:07,126 | INFO     | job summary report
[2025-10-12 16:48:40] 2025-10-12 20:48:07,126 | INFO     | --------------------------------------------------
[2025-10-12 16:48:40] 2025-10-12 20:48:07,126 | INFO     | PanDA job id: 6840531928
[2025-10-12 16:48:40] 2025-10-12 20:48:07,126 | INFO     | task id: 46676269
[2025-10-12 16:48:40] 2025-10-12 20:48:07,126 | INFO     | errors: (none)
[2025-10-12 16:48:40] 2025-10-12 20:48:07,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | pilot state: finished 
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | transexitcode: 0
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | exeerrorcode: 0
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | exeerrordiag: 
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | exitcode: 0
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | exitmsg: OK
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | cpuconsumptiontime: 28816 s
[2025-10-12 16:48:40] 2025-10-12 20:48:07,127 | INFO     | nevents: 400
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | neventsw: 0
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | pid: 13043
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | pgrp: 13043
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | corecount: 8
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | event service: False
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | sizes: {0: 2348685, 1: 2348884, 5: 2349146, 11: 2349202, 3876: 2375074, 3878: 2384256, 3885: 2384394}
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | --------------------------------------------------
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | 
[2025-10-12 16:48:40] 2025-10-12 20:48:07,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 16:48:40] 2025-10-12 20:48:07,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:48:40] 2025-10-12 20:48:07,155 | INFO     | job 6840531928 has completed (purged errors)
[2025-10-12 16:48:40] 2025-10-12 20:48:07,155 | INFO     | overall cleanup function is called
[2025-10-12 16:48:40] 2025-10-12 20:48:07,865 | INFO     | PID=6660 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:48:40] 2025-10-12 20:48:07,865 | INFO     | .. there are 2 such processes running
[2025-10-12 16:48:40] 2025-10-12 20:48:08,163 | INFO     | --- collectZombieJob: --- 10, [13043]
[2025-10-12 16:48:40] 2025-10-12 20:48:08,163 | INFO     | zombie collector waiting for pid 13043
[2025-10-12 16:48:40] 2025-10-12 20:48:08,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:48:40] 2025-10-12 20:48:08,164 | INFO     | collected zombie processes
[2025-10-12 16:48:40] 2025-10-12 20:48:08,164 | INFO     | will attempt to kill all subprocesses of pid=13043
[2025-10-12 16:48:40] 2025-10-12 20:48:08,278 | INFO     | process IDs to be killed: [13043] (in reverse order)
[2025-10-12 16:48:40] 2025-10-12 20:48:08,336 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:48:40] 2025-10-12 20:48:08,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:48:40] 2025-10-12 20:48:08,340 | INFO     | did not find any defunct processes belonging to 13043
[2025-10-12 16:48:40] 2025-10-12 20:48:08,343 | INFO     | did not find any defunct processes belonging to 13043
[2025-10-12 16:48:40] 2025-10-12 20:48:08,344 | INFO     | ready for new job
[2025-10-12 16:48:40] 2025-10-12 20:48:08,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:48:40] 2025-10-12 20:48:08,346 | INFO     | ***************************************
[2025-10-12 16:48:40] 2025-10-12 20:48:08,346 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:48:40] 2025-10-12 20:48:08,346 | INFO     | ***************************************
[2025-10-12 16:48:40] 2025-10-12 20:48:08,346 | INFO     | 
[2025-10-12 16:48:40] 2025-10-12 20:48:08,347 | INFO     | architecture information:
[2025-10-12 16:48:40] 2025-10-12 20:48:08,347 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:48:40] 2025-10-12 20:48:08,363 | INFO     | cat /etc/os-release:
[2025-10-12 16:48:40] NAME="CentOS Linux"
[2025-10-12 16:48:40] VERSION="7 (Core)"
[2025-10-12 16:48:40] ID="centos"
[2025-10-12 16:48:40] ID_LIKE="rhel fedora"
[2025-10-12 16:48:40] VERSION_ID="7"
[2025-10-12 16:48:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:48:40] ANSI_COLOR="0;31"
[2025-10-12 16:48:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:48:40] HOME_URL="https://www.centos.org/"
[2025-10-12 16:48:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:48:40] 
[2025-10-12 16:48:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:48:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:48:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:48:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:48:40] 
[2025-10-12 16:48:40] 2025-10-12 20:48:08,363 | INFO     | ***************************************
[2025-10-12 16:48:40] 2025-10-12 20:48:08,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 16:48:40] 2025-10-12 20:48:08,886 | INFO     | sufficient remaining disk space (32942063616 B)
[2025-10-12 16:48:40] 2025-10-12 20:48:08,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:48:40] 2025-10-12 20:48:08,887 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:48:40] 2025-10-12 20:48:08,887 | INFO     | update_server=False
[2025-10-12 16:48:40] 2025-10-12 20:48:08,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:48:40] 2025-10-12 20:48:08,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:48:40] 2025-10-12 20:48:08,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:48:40] 2025-10-12 20:48:08,962 | INFO     | all job control threads have been joined
[2025-10-12 16:48:40] 2025-10-12 20:48:09,160 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:48:40] 2025-10-12 20:48:09,160 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:48:40] 2025-10-12 20:48:09,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:48:40] 2025-10-12 20:48:09,161 | INFO     | will abort loop
[2025-10-12 16:48:40] 2025-10-12 20:48:09,268 | INFO     | all payload control threads have been joined
[2025-10-12 16:48:40] 2025-10-12 20:48:09,551 | INFO     | all data control threads have been joined
[2025-10-12 16:48:40] 2025-10-12 20:48:09,893 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:09,893 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:09,968 | INFO     | [job] control thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,166 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,273 | INFO     | [payload] control thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,359 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,557 | INFO     | [data] control thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,658 | INFO     | [job] validate thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:48:40] 2025-10-12 20:48:10,750 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,893 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,895 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:10,897 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:11,074 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:11,086 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:13,149 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:48:40] 2025-10-12 20:48:14,679 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:48:40] 2025-10-12 20:48:14,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418965382976)>', '<ExcThread(monitor, started 140418679285504)>']
[2025-10-12 16:48:40] 2025-10-12 20:48:19,801 | INFO     | all workflow threads have been joined
[2025-10-12 16:48:40] 2025-10-12 20:48:19,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:48:40] 2025-10-12 20:48:19,801 | INFO     | traces error code: 0
[2025-10-12 16:48:40] 2025-10-12 20:48:19,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:48:40] 2025-10-12 20:48:40,091 | INFO     | PID=6660 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:48:40] 2025-10-12 20:48:40,092 | INFO     | .. there are 2 such processes running
[2025-10-12 16:48:40] 2025-10-12 20:48:40,092 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:48:40] 2025-10-12 20:48:40,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:48:40] 2025-10-12 20:48:40,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:48:40] 2025-10-12 20:48:40,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:48:40] 2025-10-12 20:48:40,092 | INFO     | [monitor] control thread has ended
[2025-10-12 16:48:40] 2025-10-12 20:48:40,194 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:48:40] 2025-10-12 20:48:40,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:48:40] 2025-10-12 20:48:40,200 [wrapper] pilotpid: 6660
[2025-10-12 16:48:40] 2025-10-12 20:48:40,204 [wrapper] Pilot exit status: 0
[2025-10-12 16:48:40] 2025-10-12 20:48:40,215 [wrapper] pandaids: 6840531928
[2025-10-12 16:48:40] 2025-10-12 20:48:40,252 [wrapper] cleanup supervisor_pilot 32558 6661
[2025-10-12 16:48:40] 2025-10-12 20:48:40,256 [wrapper] Test setup, not cleaning
[2025-10-12 16:48:40] 2025-10-12 20:48:40,259 [wrapper] apfmon messages muted
[2025-10-12 16:48:40] 2025-10-12 20:48:40,263 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:48:40] 2025-10-12 20:48:40,266 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:48:40]  *** Error codes and diagnostics ***
[2025-10-12 16:48:40]     "exeErrorCode": 0,
[2025-10-12 16:48:40]     "exeErrorDiag": "",
[2025-10-12 16:48:40]     "pilotErrorCode": 0,
[2025-10-12 16:48:40]     "pilotErrorDiag": "",
[2025-10-12 16:48:40]  *** Listing of results directory ***
[2025-10-12 16:48:40] total 404564
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:19 queuedata.json
[2025-10-12 16:48:40] -rwx------ 1 boincer umatlas     36292 Oct 12 14:20 runpilot2-wrapper.sh
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:48:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:42 run_atlas
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:42 job.xml
[2025-10-12 16:48:40] -rw-r--r-- 2 boincer umatlas 218139583 Oct 12 15:42 EVNT.46676267._004398.pool.root.1
[2025-10-12 16:48:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:42 start_atlas.sh
[2025-10-12 16:48:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:42 shared
[2025-10-12 16:48:40] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 15:42 input.tar.gz
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:42 boinc_lockfile
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 15:42 pandaJob.out
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas    975536 Oct 12 15:43 agis_schedconf.cvmfs.json
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas   1560580 Oct 12 15:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:48:40] drwx------ 5 boincer umatlas      4096 Oct 12 15:43 pilot3
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas      6135 Oct 12 16:47 init_data.xml
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas 190447709 Oct 12 16:47 HITS.46676269._085949.pool.root.1
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 16:47 boinc_task_state.xml
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas      1047 Oct 12 16:47 memory_monitor_summary.json
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas        95 Oct 12 16:47 pilot_heartbeat.json
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas    305967 Oct 12 16:47 log.46676269._085949.job.log.tgz.1
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas      7845 Oct 12 16:48 heartbeat.json
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:48 boinc_mmap_file
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 16:48 wrapper_checkpoint.txt
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas       819 Oct 12 16:48 pilotlog.txt
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas    586910 Oct 12 16:48 log.46676269._085949.job.log.1
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas       357 Oct 12 16:48 output.list
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:48 runtime_log
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas    911360 Oct 12 16:48 result.tar.gz
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas       658 Oct 12 16:48 vGFODmRrFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ1kNDmdixqgm.diag
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 16:48 runtime_log.err
[2025-10-12 16:48:40] -rw-r--r-- 1 boincer umatlas     22202 Oct 12 16:48 stderr.txt
[2025-10-12 16:48:40] HITS file was successfully produced:
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas 190447709 Oct 12 16:47 shared/HITS.pool.root.1
[2025-10-12 16:48:40]  *** Contents of shared directory: ***
[2025-10-12 16:48:40] total 400488
[2025-10-12 16:48:40] -rw-r--r-- 2 boincer umatlas 218139583 Oct 12 15:42 ATLAS.root_0
[2025-10-12 16:48:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:42 start_atlas.sh
[2025-10-12 16:48:40] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 15:42 input.tar.gz
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas 190447709 Oct 12 16:47 HITS.pool.root.1
[2025-10-12 16:48:40] -rw------- 1 boincer umatlas    911360 Oct 12 16:48 result.tar.gz
16:48:41 (2744): run_atlas exited; CPU time 28824.927058
16:48:41 (2744): called boinc_finish(0)

</stderr_txt>
]]>

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