Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:49:01 (31416): wrapper (7.7.26015): starting
15:49:01 (31416): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:49:01] Arguments: --nthreads 8
[2025-10-12 15:49:01] Threads: 8
[2025-10-12 15:49:01] Checking for CVMFS
[2025-10-12 15:49:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:49:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:49:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:49:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:49:02] 2.11.2.0 28705 53483 123672 151635 3 188 16669771 18432001 1833 130560 0 48737454 99.976 2403045 37279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:49:02] CVMFS is ok
[2025-10-12 15:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:49:02] Further information can be found at the LHC@home message board.
[2025-10-12 15:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:49:02] Checking for apptainer binary...
[2025-10-12 15:49:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:49:02] Running /usr/bin/apptainer --version
[2025-10-12 15:49:02] apptainer version 1.3.2-1.el7
[2025-10-12 15:49:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:49:03] c-206-27.aglt2.org
[2025-10-12 15:49:03] apptainer works
[2025-10-12 15:49:03] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:49:03] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:49:03] Starting ATLAS job with PandaID=6840390625
[2025-10-12 15:49:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:59:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:59:38] 2025-10-12 22:58:53,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:59:38] 2025-10-12 22:58:53,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:59:38] 2025-10-12 22:58:53,935 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:59:38] 2025-10-12 22:58:53,936 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 18:59:38] 2025-10-12 22:58:53,937 | INFO     | sum of deviations: 26399298424.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,937 | INFO     | mean x: 1760304221.5
[2025-10-12 18:59:38] 2025-10-12 22:58:53,938 | INFO     | mean y: 2477023.4516129033
[2025-10-12 18:59:38] 2025-10-12 22:58:53,938 | INFO     | -- intersect: -23287840678.39189
[2025-10-12 18:59:38] 2025-10-12 22:58:53,938 | INFO     | intersect: -23287840678.39189
[2025-10-12 18:59:38] 2025-10-12 22:58:53,938 | INFO     | chi2: 1.4775081046740954
[2025-10-12 18:59:38] 2025-10-12 22:58:53,939 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,940 | INFO     | sum of deviations: 25660719025.000004
[2025-10-12 18:59:38] 2025-10-12 22:58:53,941 | INFO     | mean x: 1760304069.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,941 | INFO     | mean y: 2476304.082872928
[2025-10-12 18:59:38] 2025-10-12 22:58:53,941 | INFO     | -- intersect: -24564721481.648144
[2025-10-12 18:59:38] 2025-10-12 22:58:53,941 | INFO     | intersect: -24564721481.648144
[2025-10-12 18:59:38] 2025-10-12 22:58:53,942 | INFO     | chi2: 1.4785019581650347
[2025-10-12 18:59:38] 2025-10-12 22:58:53,942 | INFO     | current chi2=1.4785019581650347 (change=-0.06726551873355034 %)
[2025-10-12 18:59:38] 2025-10-12 22:58:53,942 | INFO     | right removable region: 180
[2025-10-12 18:59:38] 2025-10-12 22:58:53,942 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,944 | INFO     | sum of deviations: -2608932241.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,944 | INFO     | mean x: 1760304374.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,944 | INFO     | mean y: 2504954.1878453037
[2025-10-12 18:59:38] 2025-10-12 22:58:53,944 | INFO     | -- intersect: 2500259027.917447
[2025-10-12 18:59:38] 2025-10-12 22:58:53,945 | INFO     | intersect: 2500259027.917447
[2025-10-12 18:59:38] 2025-10-12 22:58:53,945 | INFO     | chi2: 0.048512124131365165
[2025-10-12 18:59:38] 2025-10-12 22:58:53,945 | INFO     | current chi2=0.048512124131365165 (change=96.71662551441193 %)
[2025-10-12 18:59:38] 2025-10-12 22:58:53,946 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,947 | INFO     | sum of deviations: -4697791353.000001
[2025-10-12 18:59:38] 2025-10-12 22:58:53,947 | INFO     | mean x: 1760304526.5
[2025-10-12 18:59:38] 2025-10-12 22:58:53,948 | INFO     | mean y: 2507048.147727273
[2025-10-12 18:59:38] 2025-10-12 22:58:53,948 | INFO     | -- intersect: 4894424535.008158
[2025-10-12 18:59:38] 2025-10-12 22:58:53,948 | INFO     | intersect: 4894424535.008158
[2025-10-12 18:59:38] 2025-10-12 22:58:53,948 | INFO     | chi2: 0.026683753510938872
[2025-10-12 18:59:38] 2025-10-12 22:58:53,949 | INFO     | current chi2=0.026683753510938872 (change=44.995701613307254 %)
[2025-10-12 18:59:38] 2025-10-12 22:58:53,949 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,950 | INFO     | sum of deviations: -2764706111.000007
[2025-10-12 18:59:38] 2025-10-12 22:58:53,951 | INFO     | mean x: 1760304679.0
[2025-10-12 18:59:38] 2025-10-12 22:58:53,951 | INFO     | mean y: 2504938.5204678364
[2025-10-12 18:59:38] 2025-10-12 22:58:53,951 | INFO     | -- intersect: 3141458662.635823
[2025-10-12 18:59:38] 2025-10-12 22:58:53,951 | INFO     | intersect: 3141458662.635823
[2025-10-12 18:59:38] 2025-10-12 22:58:53,952 | INFO     | chi2: 0.023797093251009444
[2025-10-12 18:59:38] 2025-10-12 22:58:53,952 | INFO     | current chi2=0.023797093251009444 (change=10.818044240837617 %)
[2025-10-12 18:59:38] 2025-10-12 22:58:53,952 | INFO     | left removable region: 30
[2025-10-12 18:59:38] 2025-10-12 22:58:53,952 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 18:59:38] 2025-10-12 22:58:53,953 | INFO     | sum of deviations: 2917481343.0000005
[2025-10-12 18:59:38] 2025-10-12 22:58:53,954 | INFO     | mean x: 1760304953.5
[2025-10-12 18:59:38] 2025-10-12 22:58:53,954 | INFO     | mean y: 2497745.04
[2025-10-12 18:59:38] 2025-10-12 22:58:53,954 | INFO     | -- intersect: -4905033799.180666
[2025-10-12 18:59:38] 2025-10-12 22:58:53,954 | INFO     | intersect: -4905033799.180666
[2025-10-12 18:59:38] 2025-10-12 22:58:53,954 | INFO     | chi2: 0.0012594260351982132
[2025-10-12 18:59:38] 2025-10-12 22:58:53,955 | INFO     | -- intersect: -4905033799.180666
[2025-10-12 18:59:38] 2025-10-12 22:58:53,955 | INFO     | current memory leak: 2.79 B/s (using 150 data points, chi2=0.00)
[2025-10-12 18:59:38] 2025-10-12 22:58:53,955 | INFO     | could have reported an average CPU frequency of 2578 MHz (10 samples)
[2025-10-12 18:59:38] 2025-10-12 22:58:53,956 | INFO     | ..............................
[2025-10-12 18:59:38] 2025-10-12 22:58:53,956 | INFO     | . Timing measurements:
[2025-10-12 18:59:38] 2025-10-12 22:58:53,956 | INFO     | . get job = 0 s
[2025-10-12 18:59:38] 2025-10-12 22:58:53,956 | INFO     | . initial setup = 2 s
[2025-10-12 18:59:38] 2025-10-12 22:58:53,956 | INFO     | . payload setup = 4 s
[2025-10-12 18:59:38] 2025-10-12 22:58:53,957 | INFO     | . stage-in = 0 s
[2025-10-12 18:59:38] 2025-10-12 22:58:53,957 | INFO     | . payload execution = 11348 s
[2025-10-12 18:59:38] 2025-10-12 22:58:53,957 | INFO     | . stage-out = 2 s
[2025-10-12 18:59:38] 2025-10-12 22:58:53,957 | INFO     | . log creation = 0 s
[2025-10-12 18:59:38] 2025-10-12 22:58:53,957 | INFO     | ..............................
[2025-10-12 18:59:38] 2025-10-12 22:58:54,118 | INFO     | 
[2025-10-12 18:59:38] 2025-10-12 22:58:54,119 | INFO     | job summary report
[2025-10-12 18:59:38] 2025-10-12 22:58:54,119 | INFO     | --------------------------------------------------
[2025-10-12 18:59:38] 2025-10-12 22:58:54,119 | INFO     | PanDA job id: 6840390625
[2025-10-12 18:59:38] 2025-10-12 22:58:54,119 | INFO     | task id: 46676269
[2025-10-12 18:59:38] 2025-10-12 22:58:54,119 | INFO     | errors: (none)
[2025-10-12 18:59:38] 2025-10-12 22:58:54,119 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:59:38] 2025-10-12 22:58:54,120 | INFO     | pilot state: finished 
[2025-10-12 18:59:38] 2025-10-12 22:58:54,120 | INFO     | transexitcode: 0
[2025-10-12 18:59:38] 2025-10-12 22:58:54,120 | INFO     | exeerrorcode: 0
[2025-10-12 18:59:38] 2025-10-12 22:58:54,120 | INFO     | exeerrordiag: 
[2025-10-12 18:59:38] 2025-10-12 22:58:54,120 | INFO     | exitcode: 0
[2025-10-12 18:59:38] 2025-10-12 22:58:54,120 | INFO     | exitmsg: OK
[2025-10-12 18:59:38] 2025-10-12 22:58:54,121 | INFO     | cpuconsumptiontime: 86356 s
[2025-10-12 18:59:38] 2025-10-12 22:58:54,121 | INFO     | nevents: 400
[2025-10-12 18:59:38] 2025-10-12 22:58:54,121 | INFO     | neventsw: 0
[2025-10-12 18:59:38] 2025-10-12 22:58:54,121 | INFO     | pid: 9239
[2025-10-12 18:59:38] 2025-10-12 22:58:54,121 | INFO     | pgrp: 9239
[2025-10-12 18:59:38] 2025-10-12 22:58:54,121 | INFO     | corecount: 8
[2025-10-12 18:59:38] 2025-10-12 22:58:54,122 | INFO     | event service: False
[2025-10-12 18:59:38] 2025-10-12 22:58:54,122 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 11356: 2378716, 11359: 2387714, 11360: 2387770, 11364: 2387964}
[2025-10-12 18:59:38] 2025-10-12 22:58:54,122 | INFO     | --------------------------------------------------
[2025-10-12 18:59:38] 2025-10-12 22:58:54,122 | INFO     | 
[2025-10-12 18:59:38] 2025-10-12 22:58:54,122 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 18:59:38] 2025-10-12 22:58:54,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:59:38] 2025-10-12 22:58:54,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:59:38] 2025-10-12 22:58:54,159 | INFO     | job 6840390625 has completed (purged errors)
[2025-10-12 18:59:38] 2025-10-12 22:58:54,160 | INFO     | overall cleanup function is called
[2025-10-12 18:59:38] 2025-10-12 22:58:55,167 | INFO     | --- collectZombieJob: --- 10, [9239]
[2025-10-12 18:59:38] 2025-10-12 22:58:55,167 | INFO     | zombie collector waiting for pid 9239
[2025-10-12 18:59:38] 2025-10-12 22:58:55,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:59:38] 2025-10-12 22:58:55,168 | INFO     | collected zombie processes
[2025-10-12 18:59:38] 2025-10-12 22:58:55,168 | INFO     | will attempt to kill all subprocesses of pid=9239
[2025-10-12 18:59:38] 2025-10-12 22:58:55,329 | INFO     | process IDs to be killed: [9239] (in reverse order)
[2025-10-12 18:59:38] 2025-10-12 22:58:55,383 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:59:38] 2025-10-12 22:58:55,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:59:38] 2025-10-12 22:58:55,389 | INFO     | did not find any defunct processes belonging to 9239
[2025-10-12 18:59:38] 2025-10-12 22:58:55,394 | INFO     | did not find any defunct processes belonging to 9239
[2025-10-12 18:59:38] 2025-10-12 22:58:55,395 | INFO     | ready for new job
[2025-10-12 18:59:38] 2025-10-12 22:58:55,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:59:38] 2025-10-12 22:58:55,397 | INFO     | ***************************************
[2025-10-12 18:59:38] 2025-10-12 22:58:55,397 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:59:38] 2025-10-12 22:58:55,397 | INFO     | ***************************************
[2025-10-12 18:59:38] 2025-10-12 22:58:55,397 | INFO     | 
[2025-10-12 18:59:38] 2025-10-12 22:58:55,399 | INFO     | architecture information:
[2025-10-12 18:59:38] 2025-10-12 22:58:55,399 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:59:38] 2025-10-12 22:58:55,414 | INFO     | cat /etc/os-release:
[2025-10-12 18:59:38] NAME="CentOS Linux"
[2025-10-12 18:59:38] VERSION="7 (Core)"
[2025-10-12 18:59:38] ID="centos"
[2025-10-12 18:59:38] ID_LIKE="rhel fedora"
[2025-10-12 18:59:38] VERSION_ID="7"
[2025-10-12 18:59:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:59:38] ANSI_COLOR="0;31"
[2025-10-12 18:59:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:59:38] HOME_URL="https://www.centos.org/"
[2025-10-12 18:59:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:59:38] 
[2025-10-12 18:59:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:59:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:59:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:59:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:59:38] 
[2025-10-12 18:59:38] 2025-10-12 22:58:55,415 | INFO     | ***************************************
[2025-10-12 18:59:38] 2025-10-12 22:58:55,916 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 18:59:38] 2025-10-12 22:58:56,026 | INFO     | sufficient remaining disk space (28545384448 B)
[2025-10-12 18:59:38] 2025-10-12 22:58:56,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:59:38] 2025-10-12 22:58:56,027 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:59:38] 2025-10-12 22:58:56,027 | INFO     | update_server=False
[2025-10-12 18:59:38] 2025-10-12 22:58:56,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:59:38] 2025-10-12 22:58:56,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:59:38] 2025-10-12 22:58:56,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:59:38] 2025-10-12 22:58:56,138 | INFO     | all payload control threads have been joined
[2025-10-12 18:59:38] 2025-10-12 22:58:56,327 | INFO     | all data control threads have been joined
[2025-10-12 18:59:38] 2025-10-12 22:58:56,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:59:38] 2025-10-12 22:58:56,528 | INFO     | aborting loop
[2025-10-12 18:59:38] 2025-10-12 22:58:57,033 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,034 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,143 | INFO     | [payload] control thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,183 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:59:38] 2025-10-12 22:58:57,333 | INFO     | [data] control thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,471 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,533 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,577 | INFO     | all job control threads have been joined
[2025-10-12 18:59:38] 2025-10-12 22:58:57,752 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:57,842 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:58,229 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:58,378 | INFO     | [job] validate thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:58,422 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:58,582 | INFO     | [job] control thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:58:59,258 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:59:00,037 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:59:06,324 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:59:38] 2025-10-12 22:59:07,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:59:38] 2025-10-12 22:59:25,377 | INFO     | PID=2785 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 18:59:38] 2025-10-12 22:59:25,377 | INFO     | .. there are 3 such processes running
[2025-10-12 18:59:38] 2025-10-12 22:59:25,378 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:59:38] 2025-10-12 22:59:25,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:59:38] 2025-10-12 22:59:25,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:59:38] 2025-10-12 22:59:32,393 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:59:38] 2025-10-12 22:59:33,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421206947648)>', '<ExcThread(monitor, started 140420759660288)>']
[2025-10-12 18:59:38] 2025-10-12 22:59:33,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:59:38] 2025-10-12 22:59:33,427 | INFO     | [monitor] control thread has ended
[2025-10-12 18:59:38] 2025-10-12 22:59:38,243 | INFO     | all workflow threads have been joined
[2025-10-12 18:59:38] 2025-10-12 22:59:38,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:59:38] 2025-10-12 22:59:38,262 | INFO     | traces error code: 0
[2025-10-12 18:59:38] 2025-10-12 22:59:38,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:59:38] 2025-10-12 22:59:38,367 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:59:38] 2025-10-12 22:59:38,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:59:38] 2025-10-12 22:59:38,372 [wrapper] pilotpid: 2785
[2025-10-12 18:59:38] 2025-10-12 22:59:38,376 [wrapper] Pilot exit status: 0
[2025-10-12 18:59:38] 2025-10-12 22:59:38,387 [wrapper] pandaids: 6840390625
[2025-10-12 18:59:38] 2025-10-12 22:59:38,414 [wrapper] cleanup supervisor_pilot 10327 2786
[2025-10-12 18:59:38] 2025-10-12 22:59:38,416 [wrapper] Test setup, not cleaning
[2025-10-12 18:59:38] 2025-10-12 22:59:38,419 [wrapper] apfmon messages muted
[2025-10-12 18:59:38] 2025-10-12 22:59:38,421 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:59:38] 2025-10-12 22:59:38,424 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:59:38]  *** Error codes and diagnostics ***
[2025-10-12 18:59:38]     "exeErrorCode": 0,
[2025-10-12 18:59:38]     "exeErrorDiag": "",
[2025-10-12 18:59:38]     "pilotErrorCode": 0,
[2025-10-12 18:59:38]     "pilotErrorDiag": "",
[2025-10-12 18:59:38]  *** Listing of results directory ***
[2025-10-12 18:59:38] total 421664
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 18:59:38] -rwx------ 1 boincer umatlas     36292 Oct 12 12:25 runpilot2-wrapper.sh
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:25 queuedata.json
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:59:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:49 run_atlas
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:49 job.xml
[2025-10-12 18:59:38] -rw-r--r-- 2 boincer umatlas 222551476 Oct 12 15:49 EVNT.46676267._004740.pool.root.1
[2025-10-12 18:59:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:49 start_atlas.sh
[2025-10-12 18:59:38] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:49 shared
[2025-10-12 18:59:38] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 15:49 input.tar.gz
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:49 boinc_lockfile
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:49 pandaJob.out
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas    975536 Oct 12 15:49 agis_schedconf.cvmfs.json
[2025-10-12 18:59:38] drwx------ 5 boincer umatlas      4096 Oct 12 15:49 pilot3
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 18:57 init_data.xml
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas 201271944 Oct 12 18:58 HITS.46676269._083457.pool.root.1
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas       530 Oct 12 18:58 boinc_task_state.xml
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas      1053 Oct 12 18:58 memory_monitor_summary.json
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas   1560580 Oct 12 18:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas    438055 Oct 12 18:58 log.46676269._083457.job.log.tgz.1
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas      7857 Oct 12 18:58 heartbeat.json
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas        95 Oct 12 18:59 pilot_heartbeat.json
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas        28 Oct 12 18:59 wrapper_checkpoint.txt
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:59 boinc_mmap_file
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas      4892 Oct 12 18:59 pilotlog.txt
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas   1595558 Oct 12 18:59 log.46676269._083457.job.log.1
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas       357 Oct 12 18:59 output.list
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:59 runtime_log
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas   2048000 Oct 12 18:59 result.tar.gz
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 18:59 runtime_log.err
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas       661 Oct 12 18:59 1SBNDmR4DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTdkNDmYkcIIn.diag
[2025-10-12 18:59:38] -rw-r--r-- 1 boincer umatlas     20882 Oct 12 18:59 stderr.txt
[2025-10-12 18:59:38] HITS file was successfully produced:
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas 201271944 Oct 12 18:58 shared/HITS.pool.root.1
[2025-10-12 18:59:38]  *** Contents of shared directory: ***
[2025-10-12 18:59:38] total 416472
[2025-10-12 18:59:38] -rw-r--r-- 2 boincer umatlas 222551476 Oct 12 15:49 ATLAS.root_0
[2025-10-12 18:59:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:49 start_atlas.sh
[2025-10-12 18:59:38] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 15:49 input.tar.gz
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas 201271944 Oct 12 18:58 HITS.pool.root.1
[2025-10-12 18:59:38] -rw------- 1 boincer umatlas   2048000 Oct 12 18:59 result.tar.gz
18:59:40 (31416): run_atlas exited; CPU time 86493.151133
18:59:40 (31416): called boinc_finish(0)

</stderr_txt>
]]>

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