Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:41:23 (6149): wrapper (7.7.26015): starting
15:41:23 (6149): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:41:23] Arguments: --nthreads 8
[2025-10-12 15:41:23] Threads: 8
[2025-10-12 15:41:23] Checking for CVMFS
[2025-10-12 15:41:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:41:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:41:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:41:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:41:24] 2.11.2.0 16446 53297 130132 151635 2 57 13551262 18432000 1833 130560 0 47950134 99.975 2271478 37905 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:41:24] CVMFS is ok
[2025-10-12 15:41:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:41:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:41:24] Further information can be found at the LHC@home message board.
[2025-10-12 15:41:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:41:24] Checking for apptainer binary...
[2025-10-12 15:41:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:41:24] Running /usr/bin/apptainer --version
[2025-10-12 15:41:24] apptainer version 1.3.2-1.el7
[2025-10-12 15:41:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:41:25] c-206-26.aglt2.org
[2025-10-12 15:41:25] apptainer works
[2025-10-12 15:41:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:41:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:41:25] Starting ATLAS job with PandaID=6840392468
[2025-10-12 15:41:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:48:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:48:01] 2025-10-12 22:47:23,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:48:01] 2025-10-12 22:47:23,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:48:01] 2025-10-12 22:47:23,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:48:01] 2025-10-12 22:47:23,050 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:48:01] 2025-10-12 22:47:23,051 | INFO     | sum of square deviations: 1900284932.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,051 | INFO     | sum of deviations: -11390049807.999998
[2025-10-12 18:48:01] 2025-10-12 22:47:23,051 | INFO     | mean x: 1760303673.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,052 | INFO     | mean y: 2494483.5027322406
[2025-10-12 18:48:01] 2025-10-12 22:47:23,052 | INFO     | -- intersect: 10553515635.669264
[2025-10-12 18:48:01] 2025-10-12 22:47:23,052 | INFO     | intersect: 10553515635.669264
[2025-10-12 18:48:01] 2025-10-12 22:47:23,052 | INFO     | chi2: 2.3508586833490233
[2025-10-12 18:48:01] 2025-10-12 22:47:23,052 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 18:48:01] 2025-10-12 22:47:23,053 | INFO     | sum of deviations: 1014322030.000004
[2025-10-12 18:48:01] 2025-10-12 22:47:23,053 | INFO     | mean x: 1760303520.5
[2025-10-12 18:48:01] 2025-10-12 22:47:23,053 | INFO     | mean y: 2506693.5393258426
[2025-10-12 18:48:01] 2025-10-12 22:47:23,054 | INFO     | -- intersect: -1018523751.180307
[2025-10-12 18:48:01] 2025-10-12 22:47:23,054 | INFO     | intersect: -1018523751.180307
[2025-10-12 18:48:01] 2025-10-12 22:47:23,054 | INFO     | chi2: 1.5657657373486806
[2025-10-12 18:48:01] 2025-10-12 22:47:23,054 | INFO     | current chi2=1.5657657373486806 (change=33.396007661417684 %)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,054 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,055 | INFO     | sum of deviations: 969676069.0000005
[2025-10-12 18:48:01] 2025-10-12 22:47:23,055 | INFO     | mean x: 1760303368.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,055 | INFO     | mean y: 2506646.0057803467
[2025-10-12 18:48:01] 2025-10-12 22:47:23,055 | INFO     | -- intersect: -1060686027.5938811
[2025-10-12 18:48:01] 2025-10-12 22:47:23,056 | INFO     | intersect: -1060686027.5938811
[2025-10-12 18:48:01] 2025-10-12 22:47:23,056 | INFO     | chi2: 1.5658620919196313
[2025-10-12 18:48:01] 2025-10-12 22:47:23,056 | INFO     | current chi2=1.5658620919196313 (change=-0.006153830592426556 %)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,056 | INFO     | right removable region: 172
[2025-10-12 18:48:01] 2025-10-12 22:47:23,056 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 18:48:01] 2025-10-12 22:47:23,057 | INFO     | sum of deviations: -37335610254.5
[2025-10-12 18:48:01] 2025-10-12 22:47:23,057 | INFO     | mean x: 1760303825.5
[2025-10-12 18:48:01] 2025-10-12 22:47:23,057 | INFO     | mean y: 2520248.691011236
[2025-10-12 18:48:01] 2025-10-12 22:47:23,057 | INFO     | -- intersect: 37585063286.874115
[2025-10-12 18:48:01] 2025-10-12 22:47:23,058 | INFO     | intersect: 37585063286.874115
[2025-10-12 18:48:01] 2025-10-12 22:47:23,058 | INFO     | chi2: 0.993214369481402
[2025-10-12 18:48:01] 2025-10-12 22:47:23,058 | INFO     | current chi2=0.993214369481402 (change=57.75099641181013 %)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,058 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,059 | INFO     | sum of deviations: -37364147244.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,059 | INFO     | mean x: 1760303978.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,059 | INFO     | mean y: 2520223.329479769
[2025-10-12 18:48:01] 2025-10-12 22:47:23,059 | INFO     | -- intersect: 40970120271.5993
[2025-10-12 18:48:01] 2025-10-12 22:47:23,059 | INFO     | intersect: 40970120271.5993
[2025-10-12 18:48:01] 2025-10-12 22:47:23,060 | INFO     | chi2: 0.9728966242420536
[2025-10-12 18:48:01] 2025-10-12 22:47:23,060 | INFO     | current chi2=0.9728966242420536 (change=2.045655586915955 %)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,060 | INFO     | left removable region: 20
[2025-10-12 18:48:01] 2025-10-12 22:47:23,060 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,061 | INFO     | sum of deviations: -14144687442.000004
[2025-10-12 18:48:01] 2025-10-12 22:47:23,061 | INFO     | mean x: 1760303947.5
[2025-10-12 18:48:01] 2025-10-12 22:47:23,061 | INFO     | mean y: 2521502.763157895
[2025-10-12 18:48:01] 2025-10-12 22:47:23,061 | INFO     | -- intersect: 22868544085.09655
[2025-10-12 18:48:01] 2025-10-12 22:47:23,061 | INFO     | intersect: 22868544085.09655
[2025-10-12 18:48:01] 2025-10-12 22:47:23,061 | INFO     | chi2: 0.13072449534816688
[2025-10-12 18:48:01] 2025-10-12 22:47:23,062 | INFO     | -- intersect: 22868544085.09655
[2025-10-12 18:48:01] 2025-10-12 22:47:23,062 | INFO     | current memory leak: -12.99 B/s (using 152 data points, chi2=0.13)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,062 | INFO     | could have reported an average CPU frequency of 2556 MHz (10 samples)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,062 | INFO     | ..............................
[2025-10-12 18:48:01] 2025-10-12 22:47:23,062 | INFO     | . Timing measurements:
[2025-10-12 18:48:01] 2025-10-12 22:47:23,062 | INFO     | . get job = 0 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,062 | INFO     | . initial setup = 2 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,063 | INFO     | . payload setup = 5 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,063 | INFO     | . stage-in = 0 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,063 | INFO     | . payload execution = 11112 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,063 | INFO     | . stage-out = 2 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,063 | INFO     | . log creation = 0 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,063 | INFO     | ..............................
[2025-10-12 18:48:01] 2025-10-12 22:47:23,143 | INFO     | 
[2025-10-12 18:48:01] 2025-10-12 22:47:23,143 | INFO     | job summary report
[2025-10-12 18:48:01] 2025-10-12 22:47:23,143 | INFO     | --------------------------------------------------
[2025-10-12 18:48:01] 2025-10-12 22:47:23,143 | INFO     | PanDA job id: 6840392468
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | task id: 46676269
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | errors: (none)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | pilot state: finished 
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | transexitcode: 0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | exeerrorcode: 0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | exeerrordiag: 
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | exitcode: 0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | exitmsg: OK
[2025-10-12 18:48:01] 2025-10-12 22:47:23,144 | INFO     | cpuconsumptiontime: 83871 s
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | nevents: 400
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | neventsw: 0
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | pid: 16235
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | pgrp: 16235
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | corecount: 8
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | event service: False
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | sizes: {0: 2348029, 1: 2348771, 2: 2348885, 5: 2349175, 12: 2349231, 11121: 2378489, 11123: 2387487, 11126: 2387543, 11131: 2387737}
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | --------------------------------------------------
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | 
[2025-10-12 18:48:01] 2025-10-12 22:47:23,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:48:01] 2025-10-12 22:47:23,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,159 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:48:01] 2025-10-12 22:47:23,162 | INFO     | job 6840392468 has completed (purged errors)
[2025-10-12 18:48:01] 2025-10-12 22:47:23,162 | INFO     | overall cleanup function is called
[2025-10-12 18:48:01] 2025-10-12 22:47:24,169 | INFO     | --- collectZombieJob: --- 10, [16235]
[2025-10-12 18:48:01] 2025-10-12 22:47:24,169 | INFO     | zombie collector waiting for pid 16235
[2025-10-12 18:48:01] 2025-10-12 22:47:24,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:48:01] 2025-10-12 22:47:24,170 | INFO     | collected zombie processes
[2025-10-12 18:48:01] 2025-10-12 22:47:24,170 | INFO     | will attempt to kill all subprocesses of pid=16235
[2025-10-12 18:48:01] 2025-10-12 22:47:24,310 | INFO     | process IDs to be killed: [16235] (in reverse order)
[2025-10-12 18:48:01] 2025-10-12 22:47:24,367 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:48:01] 2025-10-12 22:47:24,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:48:01] 2025-10-12 22:47:24,373 | INFO     | did not find any defunct processes belonging to 16235
[2025-10-12 18:48:01] 2025-10-12 22:47:24,379 | INFO     | did not find any defunct processes belonging to 16235
[2025-10-12 18:48:01] 2025-10-12 22:47:24,379 | INFO     | ready for new job
[2025-10-12 18:48:01] 2025-10-12 22:47:24,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:48:01] 2025-10-12 22:47:24,381 | INFO     | ***************************************
[2025-10-12 18:48:01] 2025-10-12 22:47:24,382 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:48:01] 2025-10-12 22:47:24,382 | INFO     | ***************************************
[2025-10-12 18:48:01] 2025-10-12 22:47:24,382 | INFO     | 
[2025-10-12 18:48:01] 2025-10-12 22:47:24,383 | INFO     | architecture information:
[2025-10-12 18:48:01] 2025-10-12 22:47:24,384 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:48:01] 2025-10-12 22:47:24,397 | INFO     | cat /etc/os-release:
[2025-10-12 18:48:01] NAME="CentOS Linux"
[2025-10-12 18:48:01] VERSION="7 (Core)"
[2025-10-12 18:48:01] ID="centos"
[2025-10-12 18:48:01] ID_LIKE="rhel fedora"
[2025-10-12 18:48:01] VERSION_ID="7"
[2025-10-12 18:48:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:48:01] ANSI_COLOR="0;31"
[2025-10-12 18:48:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:48:01] HOME_URL="https://www.centos.org/"
[2025-10-12 18:48:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:48:01] 
[2025-10-12 18:48:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:48:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:48:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:48:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:48:01] 
[2025-10-12 18:48:01] 2025-10-12 22:47:24,398 | INFO     | ***************************************
[2025-10-12 18:48:01] 2025-10-12 22:47:24,901 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:48:01] 2025-10-12 22:47:24,916 | INFO     | sufficient remaining disk space (28204597248 B)
[2025-10-12 18:48:01] 2025-10-12 22:47:24,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:48:01] 2025-10-12 22:47:24,917 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:48:01] 2025-10-12 22:47:24,917 | INFO     | update_server=False
[2025-10-12 18:48:01] 2025-10-12 22:47:24,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:48:01] 2025-10-12 22:47:24,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:48:01] 2025-10-12 22:47:24,918 | INFO     | aborting loop
[2025-10-12 18:48:01] 2025-10-12 22:47:24,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:48:01] 2025-10-12 22:47:25,521 | INFO     | all job control threads have been joined
[2025-10-12 18:48:01] 2025-10-12 22:47:25,816 | INFO     | all data control threads have been joined
[2025-10-12 18:48:01] 2025-10-12 22:47:25,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:48:01] 2025-10-12 22:47:25,923 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:25,923 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:25,923 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:25,972 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:25,972 | INFO     | [job] validate thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:26,412 | INFO     | all payload control threads have been joined
[2025-10-12 18:48:01] 2025-10-12 22:47:26,490 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:26,527 | INFO     | [job] control thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:26,657 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:26,823 | INFO     | [data] control thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:26,985 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:27,058 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:27,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:27,362 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:27,418 | INFO     | [payload] control thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:27,821 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:28,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:48:01] 2025-10-12 22:47:32,134 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:48:01] 2025-10-12 22:47:54,113 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:48:01] 2025-10-12 22:47:55,019 | INFO     | PID=9852 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 18:48:01] 2025-10-12 22:47:55,020 | INFO     | .. there are 3 such processes running
[2025-10-12 18:48:01] 2025-10-12 22:47:55,020 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:48:01] 2025-10-12 22:47:55,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:48:01] 2025-10-12 22:47:55,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:48:01] 2025-10-12 22:47:55,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754553825088)>', '<ExcThread(monitor, started 139753739515648)>']
[2025-10-12 18:48:01] 2025-10-12 22:47:56,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:48:01] 2025-10-12 22:47:56,026 | INFO     | [monitor] control thread has ended
[2025-10-12 18:48:01] 2025-10-12 22:48:00,841 | INFO     | all workflow threads have been joined
[2025-10-12 18:48:01] 2025-10-12 22:48:00,841 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:48:01] 2025-10-12 22:48:00,841 | INFO     | traces error code: 0
[2025-10-12 18:48:01] 2025-10-12 22:48:00,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:48:01] 2025-10-12 22:48:00,944 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:48:01] 2025-10-12 22:48:00,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:48:01] 2025-10-12 22:48:00,949 [wrapper] pilotpid: 9852
[2025-10-12 18:48:01] 2025-10-12 22:48:00,951 [wrapper] Pilot exit status: 0
[2025-10-12 18:48:01] 2025-10-12 22:48:00,961 [wrapper] pandaids: 6840392468
[2025-10-12 18:48:01] 2025-10-12 22:48:01,007 [wrapper] cleanup supervisor_pilot  6775 9853
[2025-10-12 18:48:01] 2025-10-12 22:48:01,010 [wrapper] Test setup, not cleaning
[2025-10-12 18:48:01] 2025-10-12 22:48:01,013 [wrapper] apfmon messages muted
[2025-10-12 18:48:01] 2025-10-12 22:48:01,015 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:48:01] 2025-10-12 22:48:01,017 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:48:01]  *** Error codes and diagnostics ***
[2025-10-12 18:48:01]     "exeErrorCode": 0,
[2025-10-12 18:48:01]     "exeErrorDiag": "",
[2025-10-12 18:48:01]     "pilotErrorCode": 0,
[2025-10-12 18:48:01]     "pilotErrorDiag": "",
[2025-10-12 18:48:01]  *** Listing of results directory ***
[2025-10-12 18:48:01] total 411532
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:42 pilot3.tar.gz
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:43 queuedata.json
[2025-10-12 18:48:01] -rwx------ 1 boincer umatlas     36292 Oct 12 12:44 runpilot2-wrapper.sh
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:48:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:41 run_atlas
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:41 job.xml
[2025-10-12 18:48:01] -rw-r--r-- 2 boincer umatlas 220855057 Oct 12 15:41 EVNT.46676267._004784.pool.root.1
[2025-10-12 18:48:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:41 start_atlas.sh
[2025-10-12 18:48:01] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:41 shared
[2025-10-12 18:48:01] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 15:41 input.tar.gz
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:41 boinc_lockfile
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:41 pandaJob.out
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas    975536 Oct 12 15:41 agis_schedconf.cvmfs.json
[2025-10-12 18:48:01] drwx------ 5 boincer umatlas      4096 Oct 12 15:41 pilot3
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 18:45 init_data.xml
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas       531 Oct 12 18:46 boinc_task_state.xml
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas 192671403 Oct 12 18:46 HITS.46676269._083929.pool.root.1
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas      1053 Oct 12 18:47 memory_monitor_summary.json
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas   1560580 Oct 12 18:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas    425290 Oct 12 18:47 log.46676269._083929.job.log.tgz.1
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas      7861 Oct 12 18:47 heartbeat.json
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:47 boinc_mmap_file
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas        28 Oct 12 18:47 wrapper_checkpoint.txt
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas        95 Oct 12 18:47 pilot_heartbeat.json
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas      4820 Oct 12 18:48 pilotlog.txt
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas   1566204 Oct 12 18:48 log.46676269._083929.job.log.1
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas       357 Oct 12 18:48 output.list
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:48 runtime_log
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas   2007040 Oct 12 18:48 result.tar.gz
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 18:48 runtime_log.err
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas       662 Oct 12 18:48 nJkMDmFMES8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2RUMDmHymYLn.diag
[2025-10-12 18:48:01] -rw-r--r-- 1 boincer umatlas     20886 Oct 12 18:48 stderr.txt
[2025-10-12 18:48:01] HITS file was successfully produced:
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas 192671403 Oct 12 18:46 shared/HITS.pool.root.1
[2025-10-12 18:48:01]  *** Contents of shared directory: ***
[2025-10-12 18:48:01] total 406380
[2025-10-12 18:48:01] -rw-r--r-- 2 boincer umatlas 220855057 Oct 12 15:41 ATLAS.root_0
[2025-10-12 18:48:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:41 start_atlas.sh
[2025-10-12 18:48:01] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 15:41 input.tar.gz
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas 192671403 Oct 12 18:46 HITS.pool.root.1
[2025-10-12 18:48:01] -rw------- 1 boincer umatlas   2007040 Oct 12 18:48 result.tar.gz
18:48:02 (6149): run_atlas exited; CPU time 84000.099825
18:48:02 (6149): called boinc_finish(0)

</stderr_txt>
]]>

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