Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
20:25:08 (3714113): wrapper (7.7.26015): starting
20:25:08 (3714113): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:25:08] Arguments: --nthreads 12
[2025-10-12 20:25:08] Threads: 12
[2025-10-12 20:25:08] Checking for CVMFS
[2025-10-12 20:25:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:25:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:25:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:25:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:25:09] 2.11.0.0 3299214 3538 88684 151636 3 188 5435737 6144000 13648 130560 0 69431002 100.000 129851 196 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 20:25:09] CVMFS is ok
[2025-10-12 20:25:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:25:09] Checking for apptainer binary...
[2025-10-12 20:25:09] apptainer is not installed, using version from CVMFS
[2025-10-12 20:25:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:25:09] radiat0r
[2025-10-12 20:25:09] apptainer works
[2025-10-12 20:25:09] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:25:09] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:25:09] Starting ATLAS job with PandaID=6839991179
[2025-10-12 20:25:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:16:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:16:33]  surl=/var/lib/boinc/slots/21/PanDA_Pilot-6839991179/log.46676269._079308.job.log.tgz.1
[2025-10-12 21:16:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/3a/log.46676269._079308.job.log.tgz.1
[2025-10-12 21:16:33]  workdir=None
[2025-10-12 21:16:33] ]
[2025-10-12 21:16:33] 2025-10-12 21:15:18,395 | INFO     | transferring file log.46676269._079308.job.log.tgz.1 from /var/lib/boinc/slots/21/PanDA_Pilot-6839991179/log.46676269._079308.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 21:16:33] 2025-10-12 21:15:18,396 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/21/PanDA_Pilot-6839991179/log.46676269._079308.job.log.tgz.1 /var/lib/boinc/slots/21/log.46676269._079308.j
[2025-10-12 21:16:33] 2025-10-12 21:15:18,424 | INFO     | adding to output.list: log.46676269._079308.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/3a/log.46676269._079308.job.log.tg
[2025-10-12 21:16:33] 2025-10-12 21:15:18,425 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:16:33] 2025-10-12 21:15:18,425 | INFO     | summary of transferred files:
[2025-10-12 21:16:33] 2025-10-12 21:15:18,425 | INFO     |  -- lfn=log.46676269._079308.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:16:33] 2025-10-12 21:15:18,426 | INFO     | stage-out finished correctly
[2025-10-12 21:16:33] 2025-10-12 21:15:18,518 | INFO     | time since job start (2995s) is within the limit (172800.0s)
[2025-10-12 21:16:33] 2025-10-12 21:15:19,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:16:33] 2025-10-12 21:15:20,527 | INFO     | time since job start (2997s) is within the limit (172800.0s)
[2025-10-12 21:16:33] 2025-10-12 21:15:20,598 | INFO     | monitor loop #210: job 0:6839991179 is in state 'finished'
[2025-10-12 21:16:33] 2025-10-12 21:15:20,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:16:33] 2025-10-12 21:15:21,387 | INFO     | job 6839991179 has state=finished
[2025-10-12 21:16:33] 2025-10-12 21:15:21,387 | INFO     | preparing for final server update for job 6839991179 in state='finished'
[2025-10-12 21:16:33] 2025-10-12 21:15:21,388 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:16:33] 2025-10-12 21:15:21,388 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:16:33] 2025-10-12 21:15:21,388 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:16:33] 2025-10-12 21:15:21,388 | INFO     | job 6839991179 has finished - writing final server update
[2025-10-12 21:16:33] 2025-10-12 21:15:21,388 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:16:33] 2025-10-12 21:15:21,390 | INFO     | executing command: lscpu
[2025-10-12 21:16:33] 2025-10-12 21:15:21,588 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:16:33] 2025-10-12 21:15:22,531 | INFO     | time since job start (2999s) is within the limit (172800.0s)
[2025-10-12 21:16:33] 2025-10-12 21:15:23,102 | INFO     | monitor loop #211: job 0:6839991179 is in state 'finished'
[2025-10-12 21:16:33] 2025-10-12 21:15:23,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:16:33] 2025-10-12 21:15:24,535 | INFO     | time since job start (3001s) is within the limit (172800.0s)
[2025-10-12 21:16:33] 2025-10-12 21:15:25,606 | INFO     | monitor loop #212: job 0:6839991179 is in state 'finished'
[2025-10-12 21:16:33] 2025-10-12 21:15:25,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:16:33] 2025-10-12 21:15:26,539 | INFO     | time since job start (3003s) is within the limit (172800.0s)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,109 | INFO     | monitor loop #213: job 0:6839991179 is in state 'finished'
[2025-10-12 21:16:33] 2025-10-12 21:15:28,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,543 | INFO     | time since job start (3005s) is within the limit (172800.0s)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,574 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 21:16:33] 2025-10-12 21:15:28,639 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2367.3268750000007
[2025-10-12 21:16:33] 2025-10-12 21:15:28,729 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-6839991179/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,730 | INFO     | extracted standard info from prmon json
[2025-10-12 21:16:33] 2025-10-12 21:15:28,730 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:16:33] 2025-10-12 21:15:28,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:16:33] 2025-10-12 21:15:28,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:16:33] 2025-10-12 21:15:28,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:16:33] 2025-10-12 21:15:28,732 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:16:33] 2025-10-12 21:15:28,732 | INFO     | sum of square deviations: 22960430.5
[2025-10-12 21:16:33] 2025-10-12 21:15:28,732 | INFO     | sum of deviations: 230441743.5
[2025-10-12 21:16:33] 2025-10-12 21:15:28,733 | INFO     | mean x: 1760302312.5
[2025-10-12 21:16:33] 2025-10-12 21:15:28,733 | INFO     | mean y: 2677710.261904762
[2025-10-12 21:16:33] 2025-10-12 21:15:28,733 | INFO     | -- intersect: -17664549129.390854
[2025-10-12 21:16:33] 2025-10-12 21:15:28,733 | INFO     | intersect: -17664549129.390854
[2025-10-12 21:16:33] 2025-10-12 21:15:28,733 | INFO     | chi2: 0.0004887225055457085
[2025-10-12 21:16:33] 2025-10-12 21:15:28,733 | INFO     | -- intersect: -17664549129.390854
[2025-10-12 21:16:33] 2025-10-12 21:15:28,733 | INFO     | current memory leak: 10.04 B/s (using 42 data points, chi2=0.00)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | could have reported an average CPU frequency of 2348 MHz (5 samples)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | ..............................
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . Timing measurements:
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . get job = 0 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . initial setup = 1 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . payload setup = 8 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . stage-in = 0 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . payload execution = 2963 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . stage-out = 0 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,734 | INFO     | . log creation = 0 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,735 | INFO     | ..............................
[2025-10-12 21:16:33] 2025-10-12 21:15:28,832 | INFO     | 
[2025-10-12 21:16:33] 2025-10-12 21:15:28,832 | INFO     | job summary report
[2025-10-12 21:16:33] 2025-10-12 21:15:28,832 | INFO     | --------------------------------------------------
[2025-10-12 21:16:33] 2025-10-12 21:15:28,832 | INFO     | PanDA job id: 6839991179
[2025-10-12 21:16:33] 2025-10-12 21:15:28,832 | INFO     | task id: 46676269
[2025-10-12 21:16:33] 2025-10-12 21:15:28,832 | INFO     | errors: (none)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | pilot state: finished 
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | transexitcode: 0
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | exeerrorcode: 0
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | exeerrordiag: 
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | exitcode: 0
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | exitmsg: OK
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | cpuconsumptiontime: 31402 s
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | nevents: 400
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | neventsw: 0
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | pid: 3727898
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | pgrp: 3727898
[2025-10-12 21:16:33] 2025-10-12 21:15:28,833 | INFO     | corecount: 12
[2025-10-12 21:16:33] 2025-10-12 21:15:28,834 | INFO     | event service: False
[2025-10-12 21:16:33] 2025-10-12 21:15:28,834 | INFO     | sizes: {0: 2348856, 6: 2349118, 11: 2349146, 2975: 2374537, 2976: 2374536, 2977: 2383592, 2978: 2383776, 2987: 2384002}
[2025-10-12 21:16:33] 2025-10-12 21:15:28,834 | INFO     | --------------------------------------------------
[2025-10-12 21:16:33] 2025-10-12 21:15:28,834 | INFO     | 
[2025-10-12 21:16:33] 2025-10-12 21:15:28,834 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-10-12 21:16:33] 2025-10-12 21:15:28,863 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,865 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:16:33] 2025-10-12 21:15:28,866 | INFO     | job 6839991179 has completed (purged errors)
[2025-10-12 21:16:33] 2025-10-12 21:15:28,866 | INFO     | overall cleanup function is called
[2025-10-12 21:16:33] 2025-10-12 21:15:29,874 | INFO     | --- collectZombieJob: --- 10, [3727898]
[2025-10-12 21:16:33] 2025-10-12 21:15:29,875 | INFO     | zombie collector waiting for pid 3727898
[2025-10-12 21:16:33] 2025-10-12 21:15:29,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:16:33] 2025-10-12 21:15:29,875 | INFO     | collected zombie processes
[2025-10-12 21:16:33] 2025-10-12 21:15:29,875 | INFO     | will attempt to kill all subprocesses of pid=3727898
[2025-10-12 21:16:33] 2025-10-12 21:15:30,746 | INFO     | process IDs to be killed: [3727898] (in reverse order)
[2025-10-12 21:16:33] 2025-10-12 21:15:31,024 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:16:33] 2025-10-12 21:15:31,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:16:33] 2025-10-12 21:15:31,053 | INFO     | did not find any defunct processes belonging to 3727898
[2025-10-12 21:16:33] 2025-10-12 21:15:31,078 | INFO     | did not find any defunct processes belonging to 3727898
[2025-10-12 21:16:33] 2025-10-12 21:15:31,079 | INFO     | ready for new job
[2025-10-12 21:16:33] 2025-10-12 21:15:31,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:16:33] 2025-10-12 21:15:31,081 | INFO     | ***************************************
[2025-10-12 21:16:33] 2025-10-12 21:15:31,081 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:16:33] 2025-10-12 21:15:31,081 | INFO     | ***************************************
[2025-10-12 21:16:33] 2025-10-12 21:15:31,081 | INFO     | 
[2025-10-12 21:16:33] 2025-10-12 21:15:31,117 | INFO     | architecture information:
[2025-10-12 21:16:33] 2025-10-12 21:15:31,118 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:16:33] 2025-10-12 21:15:31,140 | INFO     | cat /etc/os-release:
[2025-10-12 21:16:33] NAME="CentOS Linux"
[2025-10-12 21:16:33] VERSION="7 (Core)"
[2025-10-12 21:16:33] ID="centos"
[2025-10-12 21:16:33] ID_LIKE="rhel fedora"
[2025-10-12 21:16:33] VERSION_ID="7"
[2025-10-12 21:16:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:16:33] ANSI_COLOR="0;31"
[2025-10-12 21:16:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:16:33] HOME_URL="https://www.centos.org/"
[2025-10-12 21:16:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:16:33] 
[2025-10-12 21:16:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:16:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:16:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:16:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:16:33] 
[2025-10-12 21:16:33] 2025-10-12 21:15:31,140 | INFO     | ***************************************
[2025-10-12 21:16:33] 2025-10-12 21:15:31,643 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-10-12 21:16:33] 2025-10-12 21:15:31,668 | INFO     | sufficient remaining disk space (1724039299072 B)
[2025-10-12 21:16:33] 2025-10-12 21:15:31,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:16:33] 2025-10-12 21:15:31,669 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:16:33] 2025-10-12 21:15:31,669 | INFO     | update_server=False
[2025-10-12 21:16:33] 2025-10-12 21:15:31,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:16:33] 2025-10-12 21:15:31,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:16:33] 2025-10-12 21:15:31,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:16:33] 2025-10-12 21:15:31,670 | INFO     | aborting loop
[2025-10-12 21:16:33] 2025-10-12 21:15:32,017 | INFO     | all data control threads have been joined
[2025-10-12 21:16:33] 2025-10-12 21:15:32,430 | INFO     | all payload control threads have been joined
[2025-10-12 21:16:33] 2025-10-12 21:15:32,533 | INFO     | all job control threads have been joined
[2025-10-12 21:16:33] 2025-10-12 21:15:32,670 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:32,674 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:32,698 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:32,782 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:32,912 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:33,023 | INFO     | [data] control thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:33,082 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:33,434 | INFO     | [payload] control thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:33,538 | INFO     | [job] control thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:33,674 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:33,726 | INFO     | [job] validate thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:33,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:16:33] 2025-10-12 21:15:33,902 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:34,104 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:34,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:16:33] 2025-10-12 21:15:34,842 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:38,802 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:15:42,249 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:16:33] 2025-10-12 21:15:43,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:16:33] 2025-10-12 21:16:02,632 | INFO     | PID=3718827 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 21:16:33] 2025-10-12 21:16:02,632 | INFO     | .. there are 17 such processes running
[2025-10-12 21:16:33] 2025-10-12 21:16:02,632 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:16:33] 2025-10-12 21:16:02,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:16:33] 2025-10-12 21:16:02,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:16:33] 2025-10-12 21:16:27,478 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:16:33] 2025-10-12 21:16:27,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140167225276224)>', '<ExcThread(monitor, started 140166660355840)>']
[2025-10-12 21:16:33] 2025-10-12 21:16:28,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:16:33] 2025-10-12 21:16:28,735 | INFO     | [monitor] control thread has ended
[2025-10-12 21:16:33] 2025-10-12 21:16:32,870 | INFO     | all workflow threads have been joined
[2025-10-12 21:16:33] 2025-10-12 21:16:32,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:16:33] 2025-10-12 21:16:32,871 | INFO     | traces error code: 0
[2025-10-12 21:16:33] 2025-10-12 21:16:32,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:16:33] 2025-10-12 21:16:33,041 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:16:33] 2025-10-12 21:16:33,045 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:16:33] 2025-10-12 21:16:33,049 [wrapper] pilotpid: 3718827
[2025-10-12 21:16:33] 2025-10-12 21:16:33,052 [wrapper] Pilot exit status: 0
[2025-10-12 21:16:33] 2025-10-12 21:16:33,066 [wrapper] pandaids: 6839991179
[2025-10-12 21:16:33] 2025-10-12 21:16:33,243 [wrapper] cleanup supervisor_pilot 4103413 3718828
[2025-10-12 21:16:33] 2025-10-12 21:16:33,247 [wrapper] Test setup, not cleaning
[2025-10-12 21:16:33] 2025-10-12 21:16:33,251 [wrapper] apfmon messages muted
[2025-10-12 21:16:33] 2025-10-12 21:16:33,254 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:16:33] 2025-10-12 21:16:33,258 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:16:33]  *** Error codes and diagnostics ***
[2025-10-12 21:16:33]     "exeErrorCode": 0,
[2025-10-12 21:16:33]     "exeErrorDiag": "",
[2025-10-12 21:16:33]     "pilotErrorCode": 0,
[2025-10-12 21:16:33]     "pilotErrorDiag": "",
[2025-10-12 21:16:33]  *** Listing of results directory ***
[2025-10-12 21:16:33] total 411092
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc    557409 Oct 12 13:05 pilot3.tar.gz
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:20 queuedata.json
[2025-10-12 21:16:33] -rwx------ 1 boinc boinc     36292 Oct 12 13:20 runpilot2-wrapper.sh
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:16:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:25 run_atlas
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:25 job.xml
[2025-10-12 21:16:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:25 start_atlas.sh
[2025-10-12 21:16:33] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:25 shared
[2025-10-12 21:16:33] -rw-r--r-- 2 boinc boinc    569678 Oct 12 20:25 input.tar.gz
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc      9396 Oct 12 20:25 init_data.xml
[2025-10-12 21:16:33] -rw-r--r-- 2 boinc boinc 223201035 Oct 12 20:25 EVNT.46676267._003862.pool.root.1
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:25 boinc_setup_complete
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:25 boinc_lockfile
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc      2549 Oct 12 20:25 pandaJob.out
[2025-10-12 21:16:33] -rw------- 1 boinc boinc    975536 Oct 12 20:25 agis_schedconf.cvmfs.json
[2025-10-12 21:16:33] -rw------- 1 boinc boinc   1560580 Oct 12 20:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:16:33] drwx------ 5 boinc boinc      4096 Oct 12 20:25 pilot3
[2025-10-12 21:16:33] -rw------- 1 boinc boinc 192249717 Oct 12 21:14 HITS.46676269._079308.pool.root.1
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc       529 Oct 12 21:14 boinc_task_state.xml
[2025-10-12 21:16:33] -rw------- 1 boinc boinc        95 Oct 12 21:15 pilot_heartbeat.json
[2025-10-12 21:16:33] -rw------- 1 boinc boinc      1028 Oct 12 21:15 memory_monitor_summary.json
[2025-10-12 21:16:33] -rw------- 1 boinc boinc    348502 Oct 12 21:15 log.46676269._079308.job.log.tgz.1
[2025-10-12 21:16:33] -rw------- 1 boinc boinc      7740 Oct 12 21:15 heartbeat.json
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:16 wrapper_checkpoint.txt
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:16 boinc_mmap_file
[2025-10-12 21:16:33] -rw------- 1 boinc boinc      4900 Oct 12 21:16 pilotlog.txt
[2025-10-12 21:16:33] -rw------- 1 boinc boinc    447948 Oct 12 21:16 log.46676269._079308.job.log.1
[2025-10-12 21:16:33] -rw------- 1 boinc boinc       357 Oct 12 21:16 output.list
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:16 runtime_log
[2025-10-12 21:16:33] -rw------- 1 boinc boinc    819200 Oct 12 21:16 result.tar.gz
[2025-10-12 21:16:33] -rw------- 1 boinc boinc       643 Oct 12 21:16 yzoKDmTBBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtyTMDm6MR61n.diag
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc      8672 Oct 12 21:16 runtime_log.err
[2025-10-12 21:16:33] -rw-r--r-- 1 boinc boinc     21983 Oct 12 21:16 stderr.txt
[2025-10-12 21:16:33] HITS file was successfully produced:
[2025-10-12 21:16:33] -rw------- 1 boinc boinc 192249717 Oct 12 21:14 shared/HITS.pool.root.1
[2025-10-12 21:16:33]  *** Contents of shared directory: ***
[2025-10-12 21:16:33] total 407100
[2025-10-12 21:16:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:25 start_atlas.sh
[2025-10-12 21:16:33] -rw-r--r-- 2 boinc boinc    569678 Oct 12 20:25 input.tar.gz
[2025-10-12 21:16:33] -rw-r--r-- 2 boinc boinc 223201035 Oct 12 20:25 ATLAS.root_0
[2025-10-12 21:16:33] -rw------- 1 boinc boinc 192249717 Oct 12 21:14 HITS.pool.root.1
[2025-10-12 21:16:33] -rw------- 1 boinc boinc    819200 Oct 12 21:16 result.tar.gz
21:16:34 (3714113): run_atlas exited; CPU time 31576.226587
21:16:34 (3714113): called boinc_finish(0)

</stderr_txt>
]]>

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