Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:26:24 (3408158): wrapper (7.7.26015): starting
17:26:24 (3408158): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:26:25] Arguments: --nthreads 12
[2025-10-12 17:26:25] Threads: 12
[2025-10-12 17:26:25] Checking for CVMFS
[2025-10-12 17:26:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:26:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:26:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:26:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:26:25] 2.13.2.0 129280 116528 215060 151638 2 96 29345557 39288832 12196 16776704 1 105861631 99.485 147246290 34523 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:26:25] CVMFS is ok
[2025-10-12 17:26:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:26:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:26:25] Further information can be found at the LHC@home message board.
[2025-10-12 17:26:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:26:25] Checking for apptainer binary...
[2025-10-12 17:26:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:26:25] Running /usr/bin/apptainer --version
[2025-10-12 17:26:27] apptainer version 1.4.3-1.el9
[2025-10-12 17:26:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:26:28] c-210-20.aglt2.org
[2025-10-12 17:26:28] apptainer works
[2025-10-12 17:26:28] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:26:28] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:26:28] Starting ATLAS job with PandaID=6840531935
[2025-10-12 17:26:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:39:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:39:04] 2025-10-13 01:37:58,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:39:04] 2025-10-13 01:37:59,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:39:04] 2025-10-13 01:37:59,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:39:04] 2025-10-13 01:37:59,038 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:39:04] 2025-10-13 01:37:59,038 | INFO     | sum of square deviations: 4506019730.5573635
[2025-10-12 21:39:04] 2025-10-13 01:37:59,068 | INFO     | sum of deviations: -30375476871.065575
[2025-10-12 21:39:04] 2025-10-13 01:37:59,068 | INFO     | mean x: 1760311954.1967213
[2025-10-12 21:39:04] 2025-10-13 01:37:59,068 | INFO     | mean y: 2741010.668032787
[2025-10-12 21:39:04] 2025-10-13 01:37:59,068 | INFO     | -- intersect: 11869159323.920479
[2025-10-12 21:39:04] 2025-10-13 01:37:59,068 | INFO     | intersect: 11869159323.920479
[2025-10-12 21:39:04] 2025-10-13 01:37:59,069 | INFO     | chi2: 2.5093379204930324
[2025-10-12 21:39:04] 2025-10-13 01:37:59,069 | INFO     | sum of square deviations: 4234762667.907938
[2025-10-12 21:39:04] 2025-10-13 01:37:59,103 | INFO     | sum of deviations: -12920146348.000011
[2025-10-12 21:39:04] 2025-10-13 01:37:59,104 | INFO     | mean x: 1760311801.7029288
[2025-10-12 21:39:04] 2025-10-13 01:37:59,104 | INFO     | mean y: 2750668.0
[2025-10-12 21:39:04] 2025-10-13 01:37:59,104 | INFO     | -- intersect: 5373414357.955776
[2025-10-12 21:39:04] 2025-10-13 01:37:59,104 | INFO     | intersect: 5373414357.955776
[2025-10-12 21:39:04] 2025-10-13 01:37:59,105 | INFO     | chi2: 1.812273894658441
[2025-10-12 21:39:04] 2025-10-13 01:37:59,105 | INFO     | current chi2=1.812273894658441 (change=27.778802533603486 %)
[2025-10-12 21:39:04] 2025-10-13 01:37:59,105 | INFO     | sum of square deviations: 3974534249.098299
[2025-10-12 21:39:04] 2025-10-13 01:37:59,147 | INFO     | sum of deviations: -12617312167.683746
[2025-10-12 21:39:04] 2025-10-13 01:37:59,147 | INFO     | mean x: 1760311649.1837606
[2025-10-12 21:39:04] 2025-10-13 01:37:59,147 | INFO     | mean y: 2750845.5042735045
[2025-10-12 21:39:04] 2025-10-13 01:37:59,147 | INFO     | -- intersect: 5590928025.056965
[2025-10-12 21:39:04] 2025-10-13 01:37:59,147 | INFO     | intersect: 5590928025.056965
[2025-10-12 21:39:04] 2025-10-13 01:37:59,148 | INFO     | chi2: 1.8114227240653211
[2025-10-12 21:39:04] 2025-10-13 01:37:59,148 | INFO     | current chi2=1.8114227240653211 (change=0.046966995200259605 %)
[2025-10-12 21:39:04] 2025-10-13 01:37:59,148 | INFO     | right removable region: 233
[2025-10-12 21:39:04] 2025-10-13 01:37:59,148 | INFO     | sum of square deviations: 4234613940.8619137
[2025-10-12 21:39:04] 2025-10-13 01:37:59,194 | INFO     | sum of deviations: -70394412041.53139
[2025-10-12 21:39:04] 2025-10-13 01:37:59,195 | INFO     | mean x: 1760312106.7322176
[2025-10-12 21:39:04] 2025-10-13 01:37:59,195 | INFO     | mean y: 2763287.757322176
[2025-10-12 21:39:04] 2025-10-13 01:37:59,195 | INFO     | -- intersect: 29265439294.010204
[2025-10-12 21:39:04] 2025-10-13 01:37:59,195 | INFO     | intersect: 29265439294.010204
[2025-10-12 21:39:04] 2025-10-13 01:37:59,196 | INFO     | chi2: 1.0631303660376346
[2025-10-12 21:39:04] 2025-10-13 01:37:59,196 | INFO     | current chi2=1.0631303660376346 (change=57.63303310585002 %)
[2025-10-12 21:39:04] 2025-10-13 01:37:59,196 | INFO     | sum of square deviations: 3974324638.0384693
[2025-10-12 21:39:04] 2025-10-13 01:37:59,229 | INFO     | sum of deviations: -65822980888.38463
[2025-10-12 21:39:04] 2025-10-13 01:37:59,230 | INFO     | mean x: 1760312259.2692308
[2025-10-12 21:39:04] 2025-10-13 01:37:59,230 | INFO     | mean y: 2760555.52991453
[2025-10-12 21:39:04] 2025-10-13 01:37:59,230 | INFO     | -- intersect: 29157147967.790977
[2025-10-12 21:39:04] 2025-10-13 01:37:59,230 | INFO     | intersect: 29157147967.790977
[2025-10-12 21:39:04] 2025-10-13 01:37:59,256 | INFO     | chi2: 1.0293793502017359
[2025-10-12 21:39:04] 2025-10-13 01:37:59,256 | INFO     | current chi2=1.0293793502017359 (change=3.1746827025260513 %)
[2025-10-12 21:39:04] 2025-10-13 01:37:59,256 | INFO     | left removable region: 20
[2025-10-12 21:39:04] 2025-10-13 01:37:59,257 | INFO     | sum of square deviations: 2997497642.572759
[2025-10-12 21:39:04] 2025-10-13 01:37:59,258 | INFO     | sum of deviations: -22488960242.244133
[2025-10-12 21:39:04] 2025-10-13 01:37:59,259 | INFO     | mean x: 1760312228.826291
[2025-10-12 21:39:04] 2025-10-13 01:37:59,259 | INFO     | mean y: 2754784.615023474
[2025-10-12 21:39:04] 2025-10-13 01:37:59,259 | INFO     | -- intersect: 13209634805.388783
[2025-10-12 21:39:04] 2025-10-13 01:37:59,259 | INFO     | intersect: 13209634805.388783
[2025-10-12 21:39:04] 2025-10-13 01:37:59,311 | INFO     | chi2: 0.2030856901477335
[2025-10-12 21:39:04] 2025-10-13 01:37:59,311 | INFO     | -- intersect: 13209634805.388783
[2025-10-12 21:39:04] 2025-10-13 01:37:59,311 | INFO     | current memory leak: -7.50 B/s (using 213 data points, chi2=0.20)
[2025-10-12 21:39:04] 2025-10-13 01:37:59,312 | INFO     | could have reported an average CPU frequency of 2600 MHz (12 samples)
[2025-10-12 21:39:04] 2025-10-13 01:37:59,312 | INFO     | ..............................
[2025-10-12 21:39:04] 2025-10-13 01:37:59,312 | INFO     | . Timing measurements:
[2025-10-12 21:39:04] 2025-10-13 01:37:59,312 | INFO     | . get job = 0 s
[2025-10-12 21:39:04] 2025-10-13 01:37:59,312 | INFO     | . initial setup = 5 s
[2025-10-12 21:39:04] 2025-10-13 01:37:59,313 | INFO     | . payload setup = 22 s
[2025-10-12 21:39:04] 2025-10-13 01:37:59,313 | INFO     | . stage-in = 0 s
[2025-10-12 21:39:04] 2025-10-13 01:37:59,313 | INFO     | . payload execution = 14893 s
[2025-10-12 21:39:04] 2025-10-13 01:37:59,313 | INFO     | . stage-out = 7 s
[2025-10-12 21:39:04] 2025-10-13 01:37:59,313 | INFO     | . log creation = 0 s
[2025-10-12 21:39:04] 2025-10-13 01:37:59,338 | INFO     | ..............................
[2025-10-12 21:39:04] 2025-10-13 01:38:00,336 | INFO     | 
[2025-10-12 21:39:04] 2025-10-13 01:38:00,336 | INFO     | job summary report
[2025-10-12 21:39:04] 2025-10-13 01:38:00,336 | INFO     | --------------------------------------------------
[2025-10-12 21:39:04] 2025-10-13 01:38:00,336 | INFO     | PanDA job id: 6840531935
[2025-10-12 21:39:04] 2025-10-13 01:38:00,336 | INFO     | task id: 46676269
[2025-10-12 21:39:04] 2025-10-13 01:38:00,338 | INFO     | errors: (none)
[2025-10-12 21:39:04] 2025-10-13 01:38:00,338 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:39:04] 2025-10-13 01:38:00,338 | INFO     | pilot state: finished 
[2025-10-12 21:39:04] 2025-10-13 01:38:00,338 | INFO     | transexitcode: 0
[2025-10-12 21:39:04] 2025-10-13 01:38:00,340 | INFO     | exeerrorcode: 0
[2025-10-12 21:39:04] 2025-10-13 01:38:00,340 | INFO     | exeerrordiag: 
[2025-10-12 21:39:04] 2025-10-13 01:38:00,341 | INFO     | exitcode: 0
[2025-10-12 21:39:04] 2025-10-13 01:38:00,341 | INFO     | exitmsg: OK
[2025-10-12 21:39:04] 2025-10-13 01:38:00,342 | INFO     | cpuconsumptiontime: 50772 s
[2025-10-12 21:39:04] 2025-10-13 01:38:00,342 | INFO     | nevents: 400
[2025-10-12 21:39:04] 2025-10-13 01:38:00,342 | INFO     | neventsw: 0
[2025-10-12 21:39:04] 2025-10-13 01:38:00,342 | INFO     | pid: 3418870
[2025-10-12 21:39:04] 2025-10-13 01:38:00,343 | INFO     | pgrp: 3418870
[2025-10-12 21:39:04] 2025-10-13 01:38:00,343 | INFO     | corecount: 12
[2025-10-12 21:39:04] 2025-10-13 01:38:00,343 | INFO     | event service: False
[2025-10-12 21:39:04] 2025-10-13 01:38:00,343 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348885, 13: 2348913, 24: 2348969, 28: 2349259, 35: 2349415, 14922: 2380234, 14924: 2380233, 14932: 2389343, 14977: 2389481}
[2025-10-12 21:39:04] 2025-10-13 01:38:00,343 | INFO     | --------------------------------------------------
[2025-10-12 21:39:04] 2025-10-13 01:38:00,343 | INFO     | 
[2025-10-12 21:39:04] 2025-10-13 01:38:00,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:39:04] 2025-10-13 01:38:00,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:39:04] 2025-10-13 01:38:00,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:39:04] 2025-10-13 01:38:00,417 | INFO     | job 6840531935 has completed (purged errors)
[2025-10-12 21:39:04] 2025-10-13 01:38:00,417 | INFO     | overall cleanup function is called
[2025-10-12 21:39:04] 2025-10-13 01:38:01,445 | INFO     | --- collectZombieJob: --- 10, [3418870]
[2025-10-12 21:39:04] 2025-10-13 01:38:01,446 | INFO     | zombie collector waiting for pid 3418870
[2025-10-12 21:39:04] 2025-10-13 01:38:01,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:39:04] 2025-10-13 01:38:01,446 | INFO     | collected zombie processes
[2025-10-12 21:39:04] 2025-10-13 01:38:01,446 | INFO     | will attempt to kill all subprocesses of pid=3418870
[2025-10-12 21:39:04] 2025-10-13 01:38:02,688 | INFO     | process IDs to be killed: [3418870] (in reverse order)
[2025-10-12 21:39:04] 2025-10-13 01:38:03,234 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:39:04] 2025-10-13 01:38:03,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:39:04] 2025-10-13 01:38:03,256 | INFO     | did not find any defunct processes belonging to 3418870
[2025-10-12 21:39:04] 2025-10-13 01:38:03,266 | INFO     | did not find any defunct processes belonging to 3418870
[2025-10-12 21:39:04] 2025-10-13 01:38:03,267 | INFO     | ready for new job
[2025-10-12 21:39:04] 2025-10-13 01:38:03,267 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:39:04] 2025-10-13 01:38:03,270 | INFO     | ***************************************
[2025-10-12 21:39:04] 2025-10-13 01:38:03,270 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:39:04] 2025-10-13 01:38:03,270 | INFO     | ***************************************
[2025-10-12 21:39:04] 2025-10-13 01:38:03,270 | INFO     | 
[2025-10-12 21:39:04] 2025-10-13 01:38:03,272 | INFO     | architecture information:
[2025-10-12 21:39:04] 2025-10-13 01:38:03,282 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:39:04] 2025-10-13 01:38:03,458 | INFO     | cat /etc/os-release:
[2025-10-12 21:39:04] NAME="CentOS Linux"
[2025-10-12 21:39:04] VERSION="7 (Core)"
[2025-10-12 21:39:04] ID="centos"
[2025-10-12 21:39:04] ID_LIKE="rhel fedora"
[2025-10-12 21:39:04] VERSION_ID="7"
[2025-10-12 21:39:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:39:04] ANSI_COLOR="0;31"
[2025-10-12 21:39:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:39:04] HOME_URL="https://www.centos.org/"
[2025-10-12 21:39:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:39:04] 
[2025-10-12 21:39:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:39:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:39:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:39:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:39:04] 
[2025-10-12 21:39:04] 2025-10-13 01:38:03,458 | INFO     | ***************************************
[2025-10-12 21:39:04] 2025-10-13 01:38:03,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:39:04] 2025-10-13 01:38:04,099 | INFO     | sufficient remaining disk space (53119811584 B)
[2025-10-12 21:39:04] 2025-10-13 01:38:04,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:39:04] 2025-10-13 01:38:04,100 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:39:04] 2025-10-13 01:38:04,100 | INFO     | update_server=False
[2025-10-12 21:39:04] 2025-10-13 01:38:04,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:39:04] 2025-10-13 01:38:04,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:04] 2025-10-13 01:38:04,107 | INFO     | aborting loop
[2025-10-12 21:39:04] 2025-10-13 01:38:04,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:39:04] 2025-10-13 01:38:04,212 | INFO     | all data control threads have been joined
[2025-10-12 21:39:04] 2025-10-13 01:38:04,740 | INFO     | all payload control threads have been joined
[2025-10-12 21:39:04] 2025-10-13 01:38:05,107 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:05,117 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:05,219 | INFO     | [data] control thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:05,309 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:05,319 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:05,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:04] 2025-10-13 01:38:05,466 | INFO     | all job control threads have been joined
[2025-10-12 21:39:04] 2025-10-13 01:38:05,747 | INFO     | [payload] control thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,056 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,056 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,123 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,229 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,290 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,307 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,397 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,477 | INFO     | [job] control thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,581 | INFO     | [job] validate thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:06,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:39:04] 2025-10-13 01:38:10,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:39:04] 2025-10-13 01:38:33,624 | INFO     | PID=3412312 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:39:04] 2025-10-13 01:38:33,624 | INFO     | .. there are 14 such processes running
[2025-10-12 21:39:04] 2025-10-13 01:38:33,625 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:39:04] 2025-10-13 01:38:33,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:39:04] 2025-10-13 01:38:33,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:39:04] 2025-10-13 01:38:56,771 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:39:04] 2025-10-13 01:38:57,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320004200256)>', '<ExcThread(monitor, started 140318997477120)>']
[2025-10-12 21:39:04] 2025-10-13 01:38:57,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:39:04] 2025-10-13 01:38:57,814 | INFO     | [monitor] control thread has ended
[2025-10-12 21:39:04] 2025-10-13 01:39:02,297 | INFO     | all workflow threads have been joined
[2025-10-12 21:39:04] 2025-10-13 01:39:02,298 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:39:04] 2025-10-13 01:39:02,299 | INFO     | traces error code: 0
[2025-10-12 21:39:04] 2025-10-13 01:39:02,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:39:04] 2025-10-13 01:39:02,533 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:39:04] 2025-10-13 01:39:02,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:39:04] 2025-10-13 01:39:02,598 [wrapper] pilotpid: 3412312
[2025-10-12 21:39:04] 2025-10-13 01:39:02,602 [wrapper] Pilot exit status: 0
[2025-10-12 21:39:04] 2025-10-13 01:39:02,691 [wrapper] pandaids: 6840531935
[2025-10-12 21:39:04] 2025-10-13 01:39:03,416 [wrapper] cleanup supervisor_pilot 3838479 3412313
[2025-10-12 21:39:04] 2025-10-13 01:39:03,430 [wrapper] Test setup, not cleaning
[2025-10-12 21:39:04] 2025-10-13 01:39:03,468 [wrapper] apfmon messages muted
[2025-10-12 21:39:04] 2025-10-13 01:39:03,514 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:39:04] 2025-10-13 01:39:03,551 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:39:04]  *** Error codes and diagnostics ***
[2025-10-12 21:39:04]     "exeErrorCode": 0,
[2025-10-12 21:39:04]     "exeErrorDiag": "",
[2025-10-12 21:39:04]     "pilotErrorCode": 0,
[2025-10-12 21:39:04]     "pilotErrorDiag": "",
[2025-10-12 21:39:04]  *** Listing of results directory ***
[2025-10-12 21:39:04] total 407272
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 21:39:04] -rwx------. 1 boincer umatlas     36292 Oct 12 14:17 runpilot2-wrapper.sh
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:17 queuedata.json
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:39:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:26 run_atlas
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:26 job.xml
[2025-10-12 21:39:04] -rw-r--r--. 2 boincer umatlas 218139583 Oct 12 17:26 EVNT.46676267._004398.pool.root.1
[2025-10-12 21:39:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:26 start_atlas.sh
[2025-10-12 21:39:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:26 shared
[2025-10-12 21:39:04] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 17:26 input.tar.gz
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:26 boinc_lockfile
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:26 pandaJob.out
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas    975528 Oct 12 17:27 agis_schedconf.cvmfs.json
[2025-10-12 21:39:04] drwx------. 5 boincer umatlas      4096 Oct 12 17:27 pilot3
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas 190230466 Oct 12 21:35 HITS.46676269._085956.pool.root.1
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas       531 Oct 12 21:36 boinc_task_state.xml
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas      1044 Oct 12 21:36 memory_monitor_summary.json
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas    516009 Oct 12 21:37 log.46676269._085956.job.log.tgz.1
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas      7830 Oct 12 21:37 heartbeat.json
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas      6661 Oct 12 21:37 init_data.xml
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas        95 Oct 12 21:38 pilot_heartbeat.json
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:39 boinc_mmap_file
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:39 wrapper_checkpoint.txt
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas      4824 Oct 12 21:39 pilotlog.txt
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas   1872637 Oct 12 21:39 log.46676269._085956.job.log.1
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas       357 Oct 12 21:39 output.list
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:39 runtime_log
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas   2406400 Oct 12 21:39 result.tar.gz
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas       657 Oct 12 21:39 MRzLDmBoFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr0kNDmKF9QLm.diag
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 21:39 runtime_log.err
[2025-10-12 21:39:04] -rw-r--r--. 1 boincer umatlas     20967 Oct 12 21:39 stderr.txt
[2025-10-12 21:39:04] HITS file was successfully produced:
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas 190230466 Oct 12 21:35 shared/HITS.pool.root.1
[2025-10-12 21:39:04]  *** Contents of shared directory: ***
[2025-10-12 21:39:04] total 401732
[2025-10-12 21:39:04] -rw-r--r--. 2 boincer umatlas 218139583 Oct 12 17:26 ATLAS.root_0
[2025-10-12 21:39:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:26 start_atlas.sh
[2025-10-12 21:39:04] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 17:26 input.tar.gz
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas 190230466 Oct 12 21:35 HITS.pool.root.1
[2025-10-12 21:39:04] -rw-------. 1 boincer umatlas   2406400 Oct 12 21:39 result.tar.gz
21:39:06 (3408158): run_atlas exited; CPU time 51108.353136
21:39:06 (3408158): called boinc_finish(0)

</stderr_txt>
]]>

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