Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:48:55 (25883): wrapper (7.7.26015): starting
15:48:55 (25883): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:48:55] Arguments: --nthreads 8
[2025-10-12 15:48:55] Threads: 8
[2025-10-12 15:48:55] Checking for CVMFS
[2025-10-12 15:48:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:48:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:48:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:48:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:48:55] 2.11.2.0 2893 1354 70764 151635 0 56 14666891 20275200 1 130560 0 942773 99.990 47785 35422 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:48:55] CVMFS is ok
[2025-10-12 15:48:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:48:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:48:55] Further information can be found at the LHC@home message board.
[2025-10-12 15:48:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:48:55] Checking for apptainer binary...
[2025-10-12 15:48:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:48:55] Running /usr/bin/apptainer --version
[2025-10-12 15:48:55] apptainer version 1.3.2-1.el7
[2025-10-12 15:48:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:48:57] c-204-22.aglt2.org
[2025-10-12 15:48:57] apptainer works
[2025-10-12 15:48:57] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:48:57] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:48:57] Starting ATLAS job with PandaID=6840390532
[2025-10-12 15:48:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:47:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:47:32] 2025-10-12 21:46:50,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,621 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:47:32] 2025-10-12 21:46:50,624 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-12 17:47:32] 2025-10-12 21:46:50,626 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840390532/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,627 | INFO     | extracted standard info from prmon json
[2025-10-12 17:47:32] 2025-10-12 21:46:50,627 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:47:32] 2025-10-12 21:46:50,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:47:32] 2025-10-12 21:46:50,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:47:32] 2025-10-12 21:46:50,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:47:32] 2025-10-12 21:46:50,631 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:47:32] 2025-10-12 21:46:50,631 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,632 | INFO     | sum of deviations: 3466038299.9999976
[2025-10-12 17:47:32] 2025-10-12 21:46:50,632 | INFO     | mean x: 1760302062.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,632 | INFO     | mean y: 2540650.4695652174
[2025-10-12 17:47:32] 2025-10-12 21:46:50,632 | INFO     | -- intersect: -12935885466.94522
[2025-10-12 17:47:32] 2025-10-12 21:46:50,632 | INFO     | intersect: -12935885466.94522
[2025-10-12 17:47:32] 2025-10-12 21:46:50,633 | INFO     | chi2: 1.5636304673995185
[2025-10-12 17:47:32] 2025-10-12 21:46:50,633 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 17:47:32] 2025-10-12 21:46:50,633 | INFO     | sum of deviations: 3493705765.0000024
[2025-10-12 17:47:32] 2025-10-12 21:46:50,634 | INFO     | mean x: 1760301909.5
[2025-10-12 17:47:32] 2025-10-12 21:46:50,634 | INFO     | mean y: 2540722.381818182
[2025-10-12 17:47:32] 2025-10-12 21:46:50,634 | INFO     | -- intersect: -14899745509.195045
[2025-10-12 17:47:32] 2025-10-12 21:46:50,634 | INFO     | intersect: -14899745509.195045
[2025-10-12 17:47:32] 2025-10-12 21:46:50,634 | INFO     | chi2: 1.565812597156689
[2025-10-12 17:47:32] 2025-10-12 21:46:50,634 | INFO     | current chi2=1.565812597156689 (change=-0.13955533629372038 %)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,634 | INFO     | right removable region: 109
[2025-10-12 17:47:32] 2025-10-12 21:46:50,635 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 17:47:32] 2025-10-12 21:46:50,635 | INFO     | sum of deviations: -13667811402.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,635 | INFO     | mean x: 1760302214.5
[2025-10-12 17:47:32] 2025-10-12 21:46:50,635 | INFO     | mean y: 2584129.890909091
[2025-10-12 17:47:32] 2025-10-12 21:46:50,636 | INFO     | -- intersect: 58302191098.327736
[2025-10-12 17:47:32] 2025-10-12 21:46:50,636 | INFO     | intersect: 58302191098.327736
[2025-10-12 17:47:32] 2025-10-12 21:46:50,636 | INFO     | chi2: 0.10594769916279716
[2025-10-12 17:47:32] 2025-10-12 21:46:50,636 | INFO     | current chi2=0.10594769916279716 (change=93.22424950320907 %)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,636 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,637 | INFO     | sum of deviations: -11957423496.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,637 | INFO     | mean x: 1760302367.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,637 | INFO     | mean y: 2579159.2952380953
[2025-10-12 17:47:32] 2025-10-12 21:46:50,637 | INFO     | -- intersect: 58645819090.23345
[2025-10-12 17:47:32] 2025-10-12 21:46:50,637 | INFO     | intersect: 58645819090.23345
[2025-10-12 17:47:32] 2025-10-12 21:46:50,638 | INFO     | chi2: 0.09530590215579024
[2025-10-12 17:47:32] 2025-10-12 21:46:50,638 | INFO     | current chi2=0.09530590215579024 (change=10.044387080700016 %)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,638 | INFO     | left removable region: 20
[2025-10-12 17:47:32] 2025-10-12 21:46:50,638 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,639 | INFO     | sum of deviations: -4957276020.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,639 | INFO     | mean x: 1760302489.0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,639 | INFO     | mean y: 2558358.404494382
[2025-10-12 17:47:32] 2025-10-12 21:46:50,639 | INFO     | -- intersect: 39926810695.49291
[2025-10-12 17:47:32] 2025-10-12 21:46:50,639 | INFO     | intersect: 39926810695.49291
[2025-10-12 17:47:32] 2025-10-12 21:46:50,639 | INFO     | chi2: 0.06783051971800916
[2025-10-12 17:47:32] 2025-10-12 21:46:50,640 | INFO     | -- intersect: 39926810695.49291
[2025-10-12 17:47:32] 2025-10-12 21:46:50,640 | INFO     | current memory leak: -22.68 B/s (using 89 data points, chi2=0.07)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,640 | INFO     | could have reported an average CPU frequency of 1950 MHz (7 samples)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,640 | INFO     | ..............................
[2025-10-12 17:47:32] 2025-10-12 21:46:50,640 | INFO     | . Timing measurements:
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | . get job = 0 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | . initial setup = 2 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | . payload setup = 8 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | . stage-in = 0 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | . payload execution = 7014 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | . stage-out = 0 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | . log creation = 0 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,641 | INFO     | ..............................
[2025-10-12 17:47:32] 2025-10-12 21:46:50,737 | INFO     | 
[2025-10-12 17:47:32] 2025-10-12 21:46:50,738 | INFO     | job summary report
[2025-10-12 17:47:32] 2025-10-12 21:46:50,738 | INFO     | --------------------------------------------------
[2025-10-12 17:47:32] 2025-10-12 21:46:50,738 | INFO     | PanDA job id: 6840390532
[2025-10-12 17:47:32] 2025-10-12 21:46:50,738 | INFO     | task id: 46676269
[2025-10-12 17:47:32] 2025-10-12 21:46:50,738 | INFO     | errors: (none)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:47:32] 2025-10-12 21:46:50,739 | INFO     | pilot state: finished 
[2025-10-12 17:47:32] 2025-10-12 21:46:50,739 | INFO     | transexitcode: 0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,739 | INFO     | exeerrorcode: 0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,739 | INFO     | exeerrordiag: 
[2025-10-12 17:47:32] 2025-10-12 21:46:50,739 | INFO     | exitcode: 0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,739 | INFO     | exitmsg: OK
[2025-10-12 17:47:32] 2025-10-12 21:46:50,740 | INFO     | cpuconsumptiontime: 52066 s
[2025-10-12 17:47:32] 2025-10-12 21:46:50,740 | INFO     | nevents: 400
[2025-10-12 17:47:32] 2025-10-12 21:46:50,740 | INFO     | neventsw: 0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,740 | INFO     | pid: 4440
[2025-10-12 17:47:32] 2025-10-12 21:46:50,740 | INFO     | pgrp: 4440
[2025-10-12 17:47:32] 2025-10-12 21:46:50,741 | INFO     | corecount: 8
[2025-10-12 17:47:32] 2025-10-12 21:46:50,741 | INFO     | event service: False
[2025-10-12 17:47:32] 2025-10-12 21:46:50,741 | INFO     | sizes: {0: 2348029, 1: 2348885, 7: 2349147, 12: 2349175, 7027: 2376368, 7028: 2385366, 7031: 2385550, 7040: 2385744}
[2025-10-12 17:47:32] 2025-10-12 21:46:50,741 | INFO     | --------------------------------------------------
[2025-10-12 17:47:32] 2025-10-12 21:46:50,741 | INFO     | 
[2025-10-12 17:47:32] 2025-10-12 21:46:50,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:47:32] 2025-10-12 21:46:50,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,771 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:47:32] 2025-10-12 21:46:50,774 | INFO     | job 6840390532 has completed (purged errors)
[2025-10-12 17:47:32] 2025-10-12 21:46:50,775 | INFO     | overall cleanup function is called
[2025-10-12 17:47:32] 2025-10-12 21:46:51,783 | INFO     | --- collectZombieJob: --- 10, [4440]
[2025-10-12 17:47:32] 2025-10-12 21:46:51,783 | INFO     | zombie collector waiting for pid 4440
[2025-10-12 17:47:32] 2025-10-12 21:46:51,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:47:32] 2025-10-12 21:46:51,783 | INFO     | collected zombie processes
[2025-10-12 17:47:32] 2025-10-12 21:46:51,783 | INFO     | will attempt to kill all subprocesses of pid=4440
[2025-10-12 17:47:32] 2025-10-12 21:46:51,873 | INFO     | process IDs to be killed: [4440] (in reverse order)
[2025-10-12 17:47:32] 2025-10-12 21:46:51,929 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:47:32] 2025-10-12 21:46:51,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:47:32] 2025-10-12 21:46:51,933 | INFO     | did not find any defunct processes belonging to 4440
[2025-10-12 17:47:32] 2025-10-12 21:46:51,936 | INFO     | did not find any defunct processes belonging to 4440
[2025-10-12 17:47:32] 2025-10-12 21:46:51,936 | INFO     | ready for new job
[2025-10-12 17:47:32] 2025-10-12 21:46:51,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:47:32] 2025-10-12 21:46:51,938 | INFO     | ***************************************
[2025-10-12 17:47:32] 2025-10-12 21:46:51,939 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:47:32] 2025-10-12 21:46:51,939 | INFO     | ***************************************
[2025-10-12 17:47:32] 2025-10-12 21:46:51,939 | INFO     | 
[2025-10-12 17:47:32] 2025-10-12 21:46:51,939 | INFO     | architecture information:
[2025-10-12 17:47:32] 2025-10-12 21:46:51,940 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:47:32] 2025-10-12 21:46:51,957 | INFO     | cat /etc/os-release:
[2025-10-12 17:47:32] NAME="CentOS Linux"
[2025-10-12 17:47:32] VERSION="7 (Core)"
[2025-10-12 17:47:32] ID="centos"
[2025-10-12 17:47:32] ID_LIKE="rhel fedora"
[2025-10-12 17:47:32] VERSION_ID="7"
[2025-10-12 17:47:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:47:32] ANSI_COLOR="0;31"
[2025-10-12 17:47:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:47:32] HOME_URL="https://www.centos.org/"
[2025-10-12 17:47:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:47:32] 
[2025-10-12 17:47:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:47:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:47:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:47:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:47:32] 
[2025-10-12 17:47:32] 2025-10-12 21:46:51,958 | INFO     | ***************************************
[2025-10-12 17:47:32] 2025-10-12 21:46:52,461 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:47:32] 2025-10-12 21:46:52,483 | INFO     | sufficient remaining disk space (18557698048 B)
[2025-10-12 17:47:32] 2025-10-12 21:46:52,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:47:32] 2025-10-12 21:46:52,484 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:47:32] 2025-10-12 21:46:52,484 | INFO     | update_server=False
[2025-10-12 17:47:32] 2025-10-12 21:46:52,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:47:32] 2025-10-12 21:46:52,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:47:32] 2025-10-12 21:46:52,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:47:32] 2025-10-12 21:46:52,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:47:32] 2025-10-12 21:46:52,648 | INFO     | all payload control threads have been joined
[2025-10-12 17:47:32] 2025-10-12 21:46:52,735 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:47:32] 2025-10-12 21:46:52,736 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:47:32] 2025-10-12 21:46:52,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:47:32] 2025-10-12 21:46:52,737 | INFO     | will abort loop
[2025-10-12 17:47:32] 2025-10-12 21:46:53,069 | INFO     | all data control threads have been joined
[2025-10-12 17:47:32] 2025-10-12 21:46:53,073 | INFO     | all job control threads have been joined
[2025-10-12 17:47:32] 2025-10-12 21:46:53,490 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:53,491 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:53,650 | INFO     | [payload] control thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:53,708 | INFO     | [job] validate thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:53,721 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:53,739 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:53,742 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:53,758 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:54,075 | INFO     | [data] control thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:54,075 | INFO     | [job] control thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:54,311 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:54,315 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:54,491 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:54,737 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:46:56,491 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:47:03,247 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:47:32] 2025-10-12 21:47:04,252 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:47:32] 2025-10-12 21:47:22,565 | INFO     | PID=29596 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:47:32] 2025-10-12 21:47:22,567 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:47:32] 2025-10-12 21:47:22,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:47:32] 2025-10-12 21:47:22,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:47:32] 2025-10-12 21:47:24,947 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:47:32] 2025-10-12 21:47:26,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710607832896)>', '<ExcThread(monitor, started 140709361346304)>']
[2025-10-12 17:47:32] 2025-10-12 21:47:27,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:47:32] 2025-10-12 21:47:27,598 | INFO     | [monitor] control thread has ended
[2025-10-12 17:47:32] 2025-10-12 21:47:31,839 | INFO     | all workflow threads have been joined
[2025-10-12 17:47:32] 2025-10-12 21:47:31,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:47:32] 2025-10-12 21:47:31,840 | INFO     | traces error code: 0
[2025-10-12 17:47:32] 2025-10-12 21:47:31,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:47:32] 2025-10-12 21:47:31,965 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:47:32] 2025-10-12 21:47:31,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:47:32] 2025-10-12 21:47:31,975 [wrapper] pilotpid: 29596
[2025-10-12 17:47:32] 2025-10-12 21:47:31,979 [wrapper] Pilot exit status: 0
[2025-10-12 17:47:32] 2025-10-12 21:47:31,998 [wrapper] pandaids: 6840390532
[2025-10-12 17:47:32] 2025-10-12 21:47:32,047 [wrapper] cleanup supervisor_pilot 21160 29597
[2025-10-12 17:47:32] 2025-10-12 21:47:32,052 [wrapper] Test setup, not cleaning
[2025-10-12 17:47:32] 2025-10-12 21:47:32,056 [wrapper] apfmon messages muted
[2025-10-12 17:47:32] 2025-10-12 21:47:32,061 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:47:32] 2025-10-12 21:47:32,065 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:47:32]  *** Error codes and diagnostics ***
[2025-10-12 17:47:32]     "exeErrorCode": 0,
[2025-10-12 17:47:32]     "exeErrorDiag": "",
[2025-10-12 17:47:32]     "pilotErrorCode": 0,
[2025-10-12 17:47:32]     "pilotErrorDiag": "",
[2025-10-12 17:47:32]  *** Listing of results directory ***
[2025-10-12 17:47:32] total 410384
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:23 queuedata.json
[2025-10-12 17:47:32] -rwx------ 1 boincer umatlas     36292 Oct 12 12:24 runpilot2-wrapper.sh
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:47:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:48 run_atlas
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:48 job.xml
[2025-10-12 17:47:32] -rw-r--r-- 2 boincer umatlas 219925643 Oct 12 15:48 EVNT.46676267._004737.pool.root.1
[2025-10-12 17:47:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:48 start_atlas.sh
[2025-10-12 17:47:32] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:48 shared
[2025-10-12 17:47:32] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 15:48 input.tar.gz
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:48 boinc_lockfile
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:48 pandaJob.out
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas    975536 Oct 12 15:49 agis_schedconf.cvmfs.json
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas   1560580 Oct 12 15:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:47:32] drwx------ 5 boincer umatlas      4096 Oct 12 15:49 pilot3
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 17:45 init_data.xml
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas 193717598 Oct 12 17:46 HITS.46676269._083364.pool.root.1
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:46 boinc_task_state.xml
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas      1050 Oct 12 17:46 memory_monitor_summary.json
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas    351146 Oct 12 17:46 log.46676269._083364.job.log.tgz.1
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas      7851 Oct 12 17:46 heartbeat.json
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:47 boinc_mmap_file
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:47 wrapper_checkpoint.txt
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas        95 Oct 12 17:47 pilot_heartbeat.json
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas      5004 Oct 12 17:47 pilotlog.txt
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas    993575 Oct 12 17:47 log.46676269._083364.job.log.1
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas       357 Oct 12 17:47 output.list
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:47 runtime_log
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas   1361920 Oct 12 17:47 result.tar.gz
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas       659 Oct 12 17:47 Y4OLDmW3DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZckNDmRcW3Fm.diag
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 17:47 runtime_log.err
[2025-10-12 17:47:32] -rw-r--r-- 1 boincer umatlas     21057 Oct 12 17:47 stderr.txt
[2025-10-12 17:47:32] HITS file was successfully produced:
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas 193717598 Oct 12 17:46 shared/HITS.pool.root.1
[2025-10-12 17:47:32]  *** Contents of shared directory: ***
[2025-10-12 17:47:32] total 405864
[2025-10-12 17:47:32] -rw-r--r-- 2 boincer umatlas 219925643 Oct 12 15:48 ATLAS.root_0
[2025-10-12 17:47:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:48 start_atlas.sh
[2025-10-12 17:47:32] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 15:48 input.tar.gz
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas 193717598 Oct 12 17:46 HITS.pool.root.1
[2025-10-12 17:47:32] -rw------- 1 boincer umatlas   1361920 Oct 12 17:47 result.tar.gz
17:47:34 (25883): run_atlas exited; CPU time 52074.798696
17:47:34 (25883): called boinc_finish(0)

</stderr_txt>
]]>

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