Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:43:53 (161562): wrapper (7.7.26015): starting
15:43:53 (161562): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:43:53] Arguments: --nthreads 8
[2025-10-12 15:43:53] Threads: 8
[2025-10-12 15:43:53] Checking for CVMFS
[2025-10-12 15:43:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:43:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:43:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:43:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:43:54] 2.11.5.0 2587925 129678 274856 151635 3 196 16789166 32935937 28799 16776704 0 333325280 99.646 302816781 20125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:43:54] CVMFS is ok
[2025-10-12 15:43:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:43:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:43:54] Further information can be found at the LHC@home message board.
[2025-10-12 15:43:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:43:54] Checking for apptainer binary...
[2025-10-12 15:43:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:43:54] Running /usr/bin/apptainer --version
[2025-10-12 15:43:54] apptainer version 1.4.3-1.el9
[2025-10-12 15:43:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:43:55] c6-2-11-1.aglt2.org
[2025-10-12 15:43:55] apptainer works
[2025-10-12 15:43:55] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:43:55] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:43:55] Starting ATLAS job with PandaID=6840531372
[2025-10-12 15:43:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:47:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:47:42] 2025-10-12 22:46:56,449 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:47:42] 2025-10-12 22:46:56,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:47:42] 2025-10-12 22:46:56,453 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:47:42] 2025-10-12 22:46:56,454 | INFO     | sum of square deviations: 1778361297.5865946
[2025-10-12 18:47:42] 2025-10-12 22:46:56,455 | INFO     | sum of deviations: 1467298252.6815548
[2025-10-12 18:47:42] 2025-10-12 22:46:56,455 | INFO     | mean x: 1760303752.726257
[2025-10-12 18:47:42] 2025-10-12 22:46:56,455 | INFO     | mean y: 2115427.748603352
[2025-10-12 18:47:42] 2025-10-12 22:46:56,455 | INFO     | -- intersect: -1450283825.4679668
[2025-10-12 18:47:42] 2025-10-12 22:46:56,455 | INFO     | intersect: -1450283825.4679668
[2025-10-12 18:47:42] 2025-10-12 22:46:56,456 | INFO     | chi2: 2.7485427287306123
[2025-10-12 18:47:42] 2025-10-12 22:46:56,456 | INFO     | sum of square deviations: 1633485227.862065
[2025-10-12 18:47:42] 2025-10-12 22:46:56,457 | INFO     | sum of deviations: 12516230028.275867
[2025-10-12 18:47:42] 2025-10-12 22:46:56,457 | INFO     | mean x: 1760303600.2413793
[2025-10-12 18:47:42] 2025-10-12 22:46:56,457 | INFO     | mean y: 2126808.3505747127
[2025-10-12 18:47:42] 2025-10-12 22:46:56,458 | INFO     | -- intersect: -13485821784.278957
[2025-10-12 18:47:42] 2025-10-12 22:46:56,458 | INFO     | intersect: -13485821784.278957
[2025-10-12 18:47:42] 2025-10-12 22:46:56,458 | INFO     | chi2: 1.9874149055244283
[2025-10-12 18:47:42] 2025-10-12 22:46:56,458 | INFO     | current chi2=1.9874149055244283 (change=27.69204987246836 %)
[2025-10-12 18:47:42] 2025-10-12 22:46:56,458 | INFO     | sum of square deviations: 1496649137.479288
[2025-10-12 18:47:42] 2025-10-12 22:46:56,459 | INFO     | sum of deviations: 12226768339.147947
[2025-10-12 18:47:42] 2025-10-12 22:46:56,459 | INFO     | mean x: 1760303447.7278106
[2025-10-12 18:47:42] 2025-10-12 22:46:56,460 | INFO     | mean y: 2126489.3727810653
[2025-10-12 18:47:42] 2025-10-12 22:46:56,460 | INFO     | -- intersect: -14378546924.98598
[2025-10-12 18:47:42] 2025-10-12 22:46:56,460 | INFO     | intersect: -14378546924.98598
[2025-10-12 18:47:42] 2025-10-12 22:46:56,460 | INFO     | chi2: 1.9830813096582844
[2025-10-12 18:47:42] 2025-10-12 22:46:56,460 | INFO     | current chi2=1.9830813096582844 (change=0.21805189515776408 %)
[2025-10-12 18:47:42] 2025-10-12 22:46:56,460 | INFO     | right removable region: 168
[2025-10-12 18:47:42] 2025-10-12 22:46:56,461 | INFO     | sum of square deviations: 1633416602.373559
[2025-10-12 18:47:42] 2025-10-12 22:46:56,462 | INFO     | sum of deviations: -27053081331.028732
[2025-10-12 18:47:42] 2025-10-12 22:46:56,463 | INFO     | mean x: 1760303905.2471263
[2025-10-12 18:47:42] 2025-10-12 22:46:56,463 | INFO     | mean y: 2145206.442528736
[2025-10-12 18:47:42] 2025-10-12 22:46:56,463 | INFO     | -- intersect: 29156767883.09329
[2025-10-12 18:47:42] 2025-10-12 22:46:56,463 | INFO     | intersect: 29156767883.09329
[2025-10-12 18:47:42] 2025-10-12 22:46:56,463 | INFO     | chi2: 1.0235001941865929
[2025-10-12 18:47:42] 2025-10-12 22:46:56,463 | INFO     | current chi2=1.0235001941865929 (change=62.76207811914619 %)
[2025-10-12 18:47:42] 2025-10-12 22:46:56,464 | INFO     | sum of square deviations: 1496596681.5621269
[2025-10-12 18:47:42] 2025-10-12 22:46:56,465 | INFO     | sum of deviations: -30257469335.96452
[2025-10-12 18:47:42] 2025-10-12 22:46:56,465 | INFO     | mean x: 1760304057.7514794
[2025-10-12 18:47:42] 2025-10-12 22:46:56,465 | INFO     | mean y: 2148698.8579881657
[2025-10-12 18:47:42] 2025-10-12 22:46:56,465 | INFO     | -- intersect: 35591126481.29888
[2025-10-12 18:47:42] 2025-10-12 22:46:56,465 | INFO     | intersect: 35591126481.29888
[2025-10-12 18:47:42] 2025-10-12 22:46:56,466 | INFO     | chi2: 0.9455089004313632
[2025-10-12 18:47:42] 2025-10-12 22:46:56,466 | INFO     | current chi2=0.9455089004313632 (change=7.62005656649746 %)
[2025-10-12 18:47:42] 2025-10-12 22:46:56,466 | INFO     | left removable region: 20
[2025-10-12 18:47:42] 2025-10-12 22:46:56,466 | INFO     | sum of square deviations: 1005086851.641893
[2025-10-12 18:47:42] 2025-10-12 22:46:56,467 | INFO     | sum of deviations: -11173078336.18243
[2025-10-12 18:47:42] 2025-10-12 22:46:56,467 | INFO     | mean x: 1760304027.2770271
[2025-10-12 18:47:42] 2025-10-12 22:46:56,467 | INFO     | mean y: 2152460.858108108
[2025-10-12 18:47:42] 2025-10-12 22:46:56,467 | INFO     | -- intersect: 19570625334.75383
[2025-10-12 18:47:42] 2025-10-12 22:46:56,467 | INFO     | intersect: 19570625334.75383
[2025-10-12 18:47:42] 2025-10-12 22:46:56,468 | INFO     | chi2: 0.12417554377391526
[2025-10-12 18:47:42] 2025-10-12 22:46:56,468 | INFO     | -- intersect: 19570625334.75383
[2025-10-12 18:47:42] 2025-10-12 22:46:56,470 | INFO     | current memory leak: -11.12 B/s (using 148 data points, chi2=0.12)
[2025-10-12 18:47:42] 2025-10-12 22:46:56,471 | INFO     | could have reported an average CPU frequency of 2537 MHz (9 samples)
[2025-10-12 18:47:42] 2025-10-12 22:46:56,471 | INFO     | ..............................
[2025-10-12 18:47:42] 2025-10-12 22:46:56,471 | INFO     | . Timing measurements:
[2025-10-12 18:47:42] 2025-10-12 22:46:56,471 | INFO     | . get job = 0 s
[2025-10-12 18:47:42] 2025-10-12 22:46:56,471 | INFO     | . initial setup = 3 s
[2025-10-12 18:47:42] 2025-10-12 22:46:56,472 | INFO     | . payload setup = 14 s
[2025-10-12 18:47:42] 2025-10-12 22:46:56,472 | INFO     | . stage-in = 0 s
[2025-10-12 18:47:42] 2025-10-12 22:46:56,472 | INFO     | . payload execution = 10905 s
[2025-10-12 18:47:42] 2025-10-12 22:46:56,472 | INFO     | . stage-out = 2 s
[2025-10-12 18:47:42] 2025-10-12 22:46:56,472 | INFO     | . log creation = 0 s
[2025-10-12 18:47:42] 2025-10-12 22:46:56,472 | INFO     | ..............................
[2025-10-12 18:47:42] 2025-10-12 22:46:56,866 | INFO     | time since job start (10959s) is within the limit (172800.0s)
[2025-10-12 18:47:42] 2025-10-12 22:46:57,039 | INFO     | 
[2025-10-12 18:47:42] 2025-10-12 22:46:57,039 | INFO     | job summary report
[2025-10-12 18:47:42] 2025-10-12 22:46:57,039 | INFO     | --------------------------------------------------
[2025-10-12 18:47:42] 2025-10-12 22:46:57,039 | INFO     | PanDA job id: 6840531372
[2025-10-12 18:47:42] 2025-10-12 22:46:57,039 | INFO     | task id: 46676269
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | errors: (none)
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | pilot state: finished 
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | transexitcode: 0
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | exeerrorcode: 0
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | exeerrordiag: 
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | exitcode: 0
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | exitmsg: OK
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | cpuconsumptiontime: 46597 s
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | nevents: 400
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | neventsw: 0
[2025-10-12 18:47:42] 2025-10-12 22:46:57,040 | INFO     | pid: 172327
[2025-10-12 18:47:42] 2025-10-12 22:46:57,041 | INFO     | pgrp: 172327
[2025-10-12 18:47:42] 2025-10-12 22:46:57,041 | INFO     | corecount: 8
[2025-10-12 18:47:42] 2025-10-12 22:46:57,041 | INFO     | event service: False
[2025-10-12 18:47:42] 2025-10-12 22:46:57,041 | INFO     | sizes: {0: 2348857, 1: 2348857, 10: 2349147, 12: 2349175, 10924: 2378179, 10927: 2387361, 10938: 2387563}
[2025-10-12 18:47:42] 2025-10-12 22:46:57,041 | INFO     | --------------------------------------------------
[2025-10-12 18:47:42] 2025-10-12 22:46:57,041 | INFO     | 
[2025-10-12 18:47:42] 2025-10-12 22:46:57,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 18:47:42] 2025-10-12 22:46:57,075 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:47:42] 2025-10-12 22:46:57,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:47:42] 2025-10-12 22:46:57,077 | INFO     | job 6840531372 has completed (purged errors)
[2025-10-12 18:47:42] 2025-10-12 22:46:57,077 | INFO     | overall cleanup function is called
[2025-10-12 18:47:42] 2025-10-12 22:46:58,086 | INFO     | --- collectZombieJob: --- 10, [172327]
[2025-10-12 18:47:42] 2025-10-12 22:46:58,087 | INFO     | zombie collector waiting for pid 172327
[2025-10-12 18:47:42] 2025-10-12 22:46:58,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:47:42] 2025-10-12 22:46:58,087 | INFO     | collected zombie processes
[2025-10-12 18:47:42] 2025-10-12 22:46:58,087 | INFO     | will attempt to kill all subprocesses of pid=172327
[2025-10-12 18:47:42] 2025-10-12 22:46:58,561 | INFO     | process IDs to be killed: [172327] (in reverse order)
[2025-10-12 18:47:42] 2025-10-12 22:46:58,718 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:47:42] 2025-10-12 22:46:58,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:47:42] 2025-10-12 22:46:58,739 | INFO     | did not find any defunct processes belonging to 172327
[2025-10-12 18:47:42] 2025-10-12 22:46:58,761 | INFO     | did not find any defunct processes belonging to 172327
[2025-10-12 18:47:42] 2025-10-12 22:46:58,761 | INFO     | ready for new job
[2025-10-12 18:47:42] 2025-10-12 22:46:58,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:47:42] 2025-10-12 22:46:58,764 | INFO     | ***************************************
[2025-10-12 18:47:42] 2025-10-12 22:46:58,764 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:47:42] 2025-10-12 22:46:58,764 | INFO     | ***************************************
[2025-10-12 18:47:42] 2025-10-12 22:46:58,764 | INFO     | 
[2025-10-12 18:47:42] 2025-10-12 22:46:58,784 | INFO     | architecture information:
[2025-10-12 18:47:42] 2025-10-12 22:46:58,784 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:47:42] 2025-10-12 22:46:58,805 | INFO     | cat /etc/os-release:
[2025-10-12 18:47:42] NAME="CentOS Linux"
[2025-10-12 18:47:42] VERSION="7 (Core)"
[2025-10-12 18:47:42] ID="centos"
[2025-10-12 18:47:42] ID_LIKE="rhel fedora"
[2025-10-12 18:47:42] VERSION_ID="7"
[2025-10-12 18:47:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:47:42] ANSI_COLOR="0;31"
[2025-10-12 18:47:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:47:42] HOME_URL="https://www.centos.org/"
[2025-10-12 18:47:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:47:42] 
[2025-10-12 18:47:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:47:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:47:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:47:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:47:42] 
[2025-10-12 18:47:42] 2025-10-12 22:46:58,805 | INFO     | ***************************************
[2025-10-12 18:47:42] 2025-10-12 22:46:59,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 18:47:42] 2025-10-12 22:46:59,332 | INFO     | sufficient remaining disk space (94206164992 B)
[2025-10-12 18:47:42] 2025-10-12 22:46:59,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:47:42] 2025-10-12 22:46:59,333 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:47:42] 2025-10-12 22:46:59,333 | INFO     | update_server=False
[2025-10-12 18:47:42] 2025-10-12 22:46:59,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:47:42] 2025-10-12 22:46:59,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:47:42] 2025-10-12 22:46:59,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:47:42] 2025-10-12 22:46:59,334 | INFO     | aborting loop
[2025-10-12 18:47:42] 2025-10-12 22:46:59,927 | INFO     | all job control threads have been joined
[2025-10-12 18:47:42] 2025-10-12 22:47:00,065 | INFO     | all data control threads have been joined
[2025-10-12 18:47:42] 2025-10-12 22:47:00,288 | INFO     | all payload control threads have been joined
[2025-10-12 18:47:42] 2025-10-12 22:47:00,339 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:00,340 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:00,526 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:00,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:47:42] 2025-10-12 22:47:00,868 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:00,933 | INFO     | [job] control thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,081 | INFO     | [data] control thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,191 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,294 | INFO     | [payload] control thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,339 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,396 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,424 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:47:42] 2025-10-12 22:47:01,645 | INFO     | [job] validate thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:01,678 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:02,599 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:04,645 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:47:42] 2025-10-12 22:47:30,515 | INFO     | PID=165242 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 18:47:42] 2025-10-12 22:47:30,515 | INFO     | .. there are 35 such processes running
[2025-10-12 18:47:42] 2025-10-12 22:47:30,516 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:47:42] 2025-10-12 22:47:30,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:47:42] 2025-10-12 22:47:30,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:47:42] 2025-10-12 22:47:36,041 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:47:42] 2025-10-12 22:47:36,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465551206208)>', '<ExcThread(monitor, started 140465194120960)>']
[2025-10-12 18:47:42] 2025-10-12 22:47:37,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:47:42] 2025-10-12 22:47:37,564 | INFO     | [monitor] control thread has ended
[2025-10-12 18:47:42] 2025-10-12 22:47:41,846 | INFO     | all workflow threads have been joined
[2025-10-12 18:47:42] 2025-10-12 22:47:41,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:47:42] 2025-10-12 22:47:41,847 | INFO     | traces error code: 0
[2025-10-12 18:47:42] 2025-10-12 22:47:41,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:47:42] 2025-10-12 22:47:42,137 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:47:42] 2025-10-12 22:47:42,144 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:47:42] 2025-10-12 22:47:42,152 [wrapper] pilotpid: 165242
[2025-10-12 18:47:42] 2025-10-12 22:47:42,156 [wrapper] Pilot exit status: 0
[2025-10-12 18:47:42] 2025-10-12 22:47:42,190 [wrapper] pandaids: 6840531372
[2025-10-12 18:47:42] 2025-10-12 22:47:42,325 [wrapper] cleanup supervisor_pilot  864279 165243
[2025-10-12 18:47:42] 2025-10-12 22:47:42,341 [wrapper] Test setup, not cleaning
[2025-10-12 18:47:42] 2025-10-12 22:47:42,352 [wrapper] apfmon messages muted
[2025-10-12 18:47:42] 2025-10-12 22:47:42,356 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:47:42] 2025-10-12 22:47:42,360 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:47:42]  *** Error codes and diagnostics ***
[2025-10-12 18:47:42]     "exeErrorCode": 0,
[2025-10-12 18:47:42]     "exeErrorDiag": "",
[2025-10-12 18:47:42]     "pilotErrorCode": 0,
[2025-10-12 18:47:42]     "pilotErrorDiag": "",
[2025-10-12 18:47:42]  *** Listing of results directory ***
[2025-10-12 18:47:42] total 413860
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:13 queuedata.json
[2025-10-12 18:47:42] -rwx------. 1 boincer umatlas     36292 Oct 12 14:15 runpilot2-wrapper.sh
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:47:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:43 run_atlas
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:43 job.xml
[2025-10-12 18:47:42] -rw-r--r--. 2 boincer umatlas 220473977 Oct 12 15:43 EVNT.46676267._004392.pool.root.1
[2025-10-12 18:47:42] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 15:43 input.tar.gz
[2025-10-12 18:47:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:43 start_atlas.sh
[2025-10-12 18:47:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:43 shared
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:43 boinc_lockfile
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:43 pandaJob.out
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas    975536 Oct 12 15:44 agis_schedconf.cvmfs.json
[2025-10-12 18:47:42] drwx------. 5 boincer umatlas      4096 Oct 12 15:44 pilot3
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas      6859 Oct 12 18:38 init_data.xml
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas 195804689 Oct 12 18:46 HITS.46676269._085814.pool.root.1
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas       529 Oct 12 18:46 boinc_task_state.xml
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas      1044 Oct 12 18:46 memory_monitor_summary.json
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas    421085 Oct 12 18:46 log.46676269._085814.job.log.tgz.1
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas      7837 Oct 12 18:46 heartbeat.json
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas        95 Oct 12 18:47 pilot_heartbeat.json
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:47 boinc_mmap_file
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas        27 Oct 12 18:47 wrapper_checkpoint.txt
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas      4823 Oct 12 18:47 pilotlog.txt
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas   1386814 Oct 12 18:47 log.46676269._085814.job.log.1
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas       357 Oct 12 18:47 output.list
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:47 runtime_log
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas   1822720 Oct 12 18:47 result.tar.gz
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas       655 Oct 12 18:47 wdbNDmDmFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxzkNDm0VSVwn.diag
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 18:47 runtime_log.err
[2025-10-12 18:47:42] -rw-r--r--. 1 boincer umatlas     20987 Oct 12 18:47 stderr.txt
[2025-10-12 18:47:42] HITS file was successfully produced:
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas 195804689 Oct 12 18:46 shared/HITS.pool.root.1
[2025-10-12 18:47:42]  *** Contents of shared directory: ***
[2025-10-12 18:47:42] total 408888
[2025-10-12 18:47:42] -rw-r--r--. 2 boincer umatlas 220473977 Oct 12 15:43 ATLAS.root_0
[2025-10-12 18:47:42] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 15:43 input.tar.gz
[2025-10-12 18:47:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:43 start_atlas.sh
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas 195804689 Oct 12 18:46 HITS.pool.root.1
[2025-10-12 18:47:42] -rw-------. 1 boincer umatlas   1822720 Oct 12 18:47 result.tar.gz
18:47:44 (161562): run_atlas exited; CPU time 47074.627845
18:47:44 (161562): called boinc_finish(0)

</stderr_txt>
]]>

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