Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:35:53 (10528): wrapper (7.7.26015): starting
15:35:53 (10528): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:35:53] Arguments: --nthreads 8
[2025-10-12 15:35:53] Threads: 8
[2025-10-12 15:35:53] Checking for CVMFS
[2025-10-12 15:35:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:35:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:35:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:35:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:35:54] 2.11.2.0 3869 39021 130348 151635 3 57 9255826 18432001 1833 130560 0 39034355 99.994 1271205 37663 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:35:54] CVMFS is ok
[2025-10-12 15:35:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:35:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:35:54] Further information can be found at the LHC@home message board.
[2025-10-12 15:35:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:35:54] Checking for apptainer binary...
[2025-10-12 15:35:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:35:54] Running /usr/bin/apptainer --version
[2025-10-12 15:35:54] apptainer version 1.3.2-1.el7
[2025-10-12 15:35:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:35:54] c-206-12.aglt2.org
[2025-10-12 15:35:54] apptainer works
[2025-10-12 15:35:54] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:35:54] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:35:55] Starting ATLAS job with PandaID=6840390674
[2025-10-12 15:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:30:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:30:26] 2025-10-12 22:29:38,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:30:26] 2025-10-12 22:29:38,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:30:26] 2025-10-12 22:29:38,229 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:30:26] 2025-10-12 22:29:38,229 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,231 | INFO     | sum of deviations: -5911318155.000002
[2025-10-12 18:30:26] 2025-10-12 22:29:38,231 | INFO     | mean x: 1760302972.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,231 | INFO     | mean y: 2494918.2573099416
[2025-10-12 18:30:26] 2025-10-12 22:29:38,231 | INFO     | -- intersect: 6713998925.779601
[2025-10-12 18:30:26] 2025-10-12 22:29:38,232 | INFO     | intersect: 6713998925.779601
[2025-10-12 18:30:26] 2025-10-12 22:29:38,232 | INFO     | chi2: 1.981927038303601
[2025-10-12 18:30:26] 2025-10-12 22:29:38,232 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 18:30:26] 2025-10-12 22:29:38,234 | INFO     | sum of deviations: 5497207363.499993
[2025-10-12 18:30:26] 2025-10-12 22:29:38,234 | INFO     | mean x: 1760302819.5
[2025-10-12 18:30:26] 2025-10-12 22:29:38,234 | INFO     | mean y: 2507782.2590361447
[2025-10-12 18:30:26] 2025-10-12 22:29:38,234 | INFO     | -- intersect: -6819977017.8790865
[2025-10-12 18:30:26] 2025-10-12 22:29:38,235 | INFO     | intersect: -6819977017.8790865
[2025-10-12 18:30:26] 2025-10-12 22:29:38,235 | INFO     | chi2: 1.2075229412175665
[2025-10-12 18:30:26] 2025-10-12 22:29:38,235 | INFO     | current chi2=1.2075229412175665 (change=39.07328989006948 %)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,235 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | sum of deviations: 5392474968.999999
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | mean x: 1760302667.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | mean y: 2507653.8260869565
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | -- intersect: -7333101564.835064
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | intersect: -7333101564.835064
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | chi2: 1.2082078500351077
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | current chi2=1.2082078500351077 (change=-0.05672014950295887 %)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,237 | INFO     | right removable region: 160
[2025-10-12 18:30:26] 2025-10-12 22:29:38,238 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 18:30:26] 2025-10-12 22:29:38,238 | INFO     | sum of deviations: -26364281008.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,239 | INFO     | mean x: 1760303124.5
[2025-10-12 18:30:26] 2025-10-12 22:29:38,239 | INFO     | mean y: 2518176.9036144577
[2025-10-12 18:30:26] 2025-10-12 22:29:38,239 | INFO     | -- intersect: 32722756966.36863
[2025-10-12 18:30:26] 2025-10-12 22:29:38,239 | INFO     | intersect: 32722756966.36863
[2025-10-12 18:30:26] 2025-10-12 22:29:38,239 | INFO     | chi2: 0.8323631381150782
[2025-10-12 18:30:26] 2025-10-12 22:29:38,239 | INFO     | current chi2=0.8323631381150782 (change=58.00233197143694 %)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,240 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,240 | INFO     | sum of deviations: -24691920563.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,240 | INFO     | mean x: 1760303277.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,240 | INFO     | mean y: 2516118.801242236
[2025-10-12 18:30:26] 2025-10-12 22:29:38,241 | INFO     | -- intersect: 33591979939.584724
[2025-10-12 18:30:26] 2025-10-12 22:29:38,241 | INFO     | intersect: 33591979939.584724
[2025-10-12 18:30:26] 2025-10-12 22:29:38,241 | INFO     | chi2: 0.8327079805496068
[2025-10-12 18:30:26] 2025-10-12 22:29:38,241 | INFO     | current chi2=0.8327079805496068 (change=-0.04142932558372323 %)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,241 | INFO     | left removable region: 20
[2025-10-12 18:30:26] 2025-10-12 22:29:38,241 | INFO     | sum of square deviations: 850825255.0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,242 | INFO     | sum of deviations: -8645219235.499998
[2025-10-12 18:30:26] 2025-10-12 22:29:38,242 | INFO     | mean x: 1760303246.5
[2025-10-12 18:30:26] 2025-10-12 22:29:38,242 | INFO     | mean y: 2524580.7928571426
[2025-10-12 18:30:26] 2025-10-12 22:29:38,242 | INFO     | -- intersect: 17888932391.941925
[2025-10-12 18:30:26] 2025-10-12 22:29:38,242 | INFO     | intersect: 17888932391.941925
[2025-10-12 18:30:26] 2025-10-12 22:29:38,243 | INFO     | chi2: 0.03127007165276865
[2025-10-12 18:30:26] 2025-10-12 22:29:38,243 | INFO     | -- intersect: 17888932391.941925
[2025-10-12 18:30:26] 2025-10-12 22:29:38,243 | INFO     | current memory leak: -10.16 B/s (using 140 data points, chi2=0.03)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,243 | INFO     | could have reported an average CPU frequency of 2451 MHz (9 samples)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,243 | INFO     | ..............................
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . Timing measurements:
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . get job = 0 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . initial setup = 2 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . payload setup = 4 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . stage-in = 0 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . payload execution = 10382 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . stage-out = 0 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | . log creation = 0 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,244 | INFO     | ..............................
[2025-10-12 18:30:26] 2025-10-12 22:29:38,321 | INFO     | 
[2025-10-12 18:30:26] 2025-10-12 22:29:38,321 | INFO     | job summary report
[2025-10-12 18:30:26] 2025-10-12 22:29:38,321 | INFO     | --------------------------------------------------
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | PanDA job id: 6840390674
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | task id: 46676269
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | errors: (none)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | pilot state: finished 
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | transexitcode: 0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | exeerrorcode: 0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | exeerrordiag: 
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | exitcode: 0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,322 | INFO     | exitmsg: OK
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | cpuconsumptiontime: 78858 s
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | nevents: 400
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | neventsw: 0
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | pid: 20654
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | pgrp: 20654
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | corecount: 8
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | event service: False
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | sizes: {0: 2348856, 3: 2349118, 11: 2349146, 10391: 2377920, 10392: 2386918, 10396: 2386974, 10399: 2387360}
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | --------------------------------------------------
[2025-10-12 18:30:26] 2025-10-12 22:29:38,323 | INFO     | 
[2025-10-12 18:30:26] 2025-10-12 22:29:38,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:30:26] 2025-10-12 22:29:38,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:30:26] 2025-10-12 22:29:38,344 | INFO     | job 6840390674 has completed (purged errors)
[2025-10-12 18:30:26] 2025-10-12 22:29:38,344 | INFO     | overall cleanup function is called
[2025-10-12 18:30:26] 2025-10-12 22:29:39,351 | INFO     | --- collectZombieJob: --- 10, [20654]
[2025-10-12 18:30:26] 2025-10-12 22:29:39,352 | INFO     | zombie collector waiting for pid 20654
[2025-10-12 18:30:26] 2025-10-12 22:29:39,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:30:26] 2025-10-12 22:29:39,352 | INFO     | collected zombie processes
[2025-10-12 18:30:26] 2025-10-12 22:29:39,352 | INFO     | will attempt to kill all subprocesses of pid=20654
[2025-10-12 18:30:26] 2025-10-12 22:29:39,489 | INFO     | process IDs to be killed: [20654] (in reverse order)
[2025-10-12 18:30:26] 2025-10-12 22:29:39,544 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:30:26] 2025-10-12 22:29:39,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:30:26] 2025-10-12 22:29:39,550 | INFO     | did not find any defunct processes belonging to 20654
[2025-10-12 18:30:26] 2025-10-12 22:29:39,555 | INFO     | did not find any defunct processes belonging to 20654
[2025-10-12 18:30:26] 2025-10-12 22:29:39,555 | INFO     | ready for new job
[2025-10-12 18:30:26] 2025-10-12 22:29:39,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:30:26] 2025-10-12 22:29:39,557 | INFO     | ***************************************
[2025-10-12 18:30:26] 2025-10-12 22:29:39,558 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:30:26] 2025-10-12 22:29:39,558 | INFO     | ***************************************
[2025-10-12 18:30:26] 2025-10-12 22:29:39,558 | INFO     | 
[2025-10-12 18:30:26] 2025-10-12 22:29:39,559 | INFO     | architecture information:
[2025-10-12 18:30:26] 2025-10-12 22:29:39,560 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:30:26] 2025-10-12 22:29:39,583 | INFO     | cat /etc/os-release:
[2025-10-12 18:30:26] NAME="CentOS Linux"
[2025-10-12 18:30:26] VERSION="7 (Core)"
[2025-10-12 18:30:26] ID="centos"
[2025-10-12 18:30:26] ID_LIKE="rhel fedora"
[2025-10-12 18:30:26] VERSION_ID="7"
[2025-10-12 18:30:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:30:26] ANSI_COLOR="0;31"
[2025-10-12 18:30:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:30:26] HOME_URL="https://www.centos.org/"
[2025-10-12 18:30:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:30:26] 
[2025-10-12 18:30:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:30:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:30:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:30:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:30:26] 
[2025-10-12 18:30:26] 2025-10-12 22:29:39,584 | INFO     | ***************************************
[2025-10-12 18:30:26] 2025-10-12 22:29:40,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:30:26] 2025-10-12 22:29:40,113 | INFO     | sufficient remaining disk space (28139585536 B)
[2025-10-12 18:30:26] 2025-10-12 22:29:40,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:30:26] 2025-10-12 22:29:40,113 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:30:26] 2025-10-12 22:29:40,113 | INFO     | update_server=False
[2025-10-12 18:30:26] 2025-10-12 22:29:40,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:30:26] 2025-10-12 22:29:40,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:30:26] 2025-10-12 22:29:40,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:30:26] 2025-10-12 22:29:40,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:30:26] 2025-10-12 22:29:40,114 | INFO     | aborting loop
[2025-10-12 18:30:26] 2025-10-12 22:29:40,243 | INFO     | all payload control threads have been joined
[2025-10-12 18:30:26] 2025-10-12 22:29:40,745 | INFO     | all data control threads have been joined
[2025-10-12 18:30:26] 2025-10-12 22:29:40,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:30:26] 2025-10-12 22:29:41,119 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,121 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,121 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,249 | INFO     | [payload] control thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,412 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,440 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,448 | INFO     | all job control threads have been joined
[2025-10-12 18:30:26] 2025-10-12 22:29:41,682 | INFO     | [job] validate thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,751 | INFO     | [data] control thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,793 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:41,940 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:42,121 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:42,436 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:42,456 | INFO     | [job] control thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:42,512 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:44,899 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:29:50,576 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:30:26] 2025-10-12 22:29:51,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:30:26] 2025-10-12 22:30:11,102 | INFO     | PID=14208 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:30:26] 2025-10-12 22:30:11,102 | INFO     | .. there are 3 such processes running
[2025-10-12 18:30:26] 2025-10-12 22:30:11,103 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:30:26] 2025-10-12 22:30:11,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:30:26] 2025-10-12 22:30:11,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:30:26] 2025-10-12 22:30:21,065 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:30:26] 2025-10-12 22:30:21,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572793415488)>', '<ExcThread(monitor, started 140571989501696)>']
[2025-10-12 18:30:26] 2025-10-12 22:30:22,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:30:26] 2025-10-12 22:30:22,154 | INFO     | [monitor] control thread has ended
[2025-10-12 18:30:26] 2025-10-12 22:30:26,281 | INFO     | all workflow threads have been joined
[2025-10-12 18:30:26] 2025-10-12 22:30:26,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:30:26] 2025-10-12 22:30:26,282 | INFO     | traces error code: 0
[2025-10-12 18:30:26] 2025-10-12 22:30:26,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:30:26] 2025-10-12 22:30:26,377 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:30:26] 2025-10-12 22:30:26,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:30:26] 2025-10-12 22:30:26,381 [wrapper] pilotpid: 14208
[2025-10-12 18:30:26] 2025-10-12 22:30:26,383 [wrapper] Pilot exit status: 0
[2025-10-12 18:30:26] 2025-10-12 22:30:26,391 [wrapper] pandaids: 6840390674
[2025-10-12 18:30:26] 2025-10-12 22:30:26,425 [wrapper] cleanup supervisor_pilot  6854 14209
[2025-10-12 18:30:26] 2025-10-12 22:30:26,428 [wrapper] Test setup, not cleaning
[2025-10-12 18:30:26] 2025-10-12 22:30:26,430 [wrapper] apfmon messages muted
[2025-10-12 18:30:26] 2025-10-12 22:30:26,433 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:30:26] 2025-10-12 22:30:26,435 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:30:26]  *** Error codes and diagnostics ***
[2025-10-12 18:30:26]     "exeErrorCode": 0,
[2025-10-12 18:30:26]     "exeErrorDiag": "",
[2025-10-12 18:30:26]     "pilotErrorCode": 0,
[2025-10-12 18:30:26]     "pilotErrorDiag": "",
[2025-10-12 18:30:26]  *** Listing of results directory ***
[2025-10-12 18:30:26] total 410976
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:26 queuedata.json
[2025-10-12 18:30:26] -rwx------ 1 boincer umatlas     36292 Oct 12 12:28 runpilot2-wrapper.sh
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:30:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:35 run_atlas
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:35 job.xml
[2025-10-12 18:30:26] -rw-r--r-- 2 boincer umatlas 220559628 Oct 12 15:35 EVNT.46676267._004742.pool.root.1
[2025-10-12 18:30:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:35 start_atlas.sh
[2025-10-12 18:30:26] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:35 shared
[2025-10-12 18:30:26] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 15:35 input.tar.gz
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:35 boinc_lockfile
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 15:35 pandaJob.out
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas    975536 Oct 12 15:36 agis_schedconf.cvmfs.json
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas   1560580 Oct 12 15:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:30:26] drwx------ 5 boincer umatlas      4096 Oct 12 15:36 pilot3
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 18:22 init_data.xml
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas 192603477 Oct 12 18:28 HITS.46676269._083506.pool.root.1
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas       530 Oct 12 18:29 boinc_task_state.xml
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas      1054 Oct 12 18:29 memory_monitor_summary.json
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas    421961 Oct 12 18:29 log.46676269._083506.job.log.tgz.1
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas        95 Oct 12 18:29 pilot_heartbeat.json
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas      7862 Oct 12 18:29 heartbeat.json
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:30 boinc_mmap_file
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas        28 Oct 12 18:30 wrapper_checkpoint.txt
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas      4893 Oct 12 18:30 pilotlog.txt
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas   1463727 Oct 12 18:30 log.46676269._083506.job.log.1
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas       357 Oct 12 18:30 output.list
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:30 runtime_log
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas   1904640 Oct 12 18:30 result.tar.gz
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 18:30 runtime_log.err
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas       662 Oct 12 18:30 1fRNDmN7DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtdkNDm9AvoMm.diag
[2025-10-12 18:30:26] -rw-r--r-- 1 boincer umatlas     20862 Oct 12 18:30 stderr.txt
[2025-10-12 18:30:26] HITS file was successfully produced:
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas 192603477 Oct 12 18:28 shared/HITS.pool.root.1
[2025-10-12 18:30:26]  *** Contents of shared directory: ***
[2025-10-12 18:30:26] total 405924
[2025-10-12 18:30:26] -rw-r--r-- 2 boincer umatlas 220559628 Oct 12 15:35 ATLAS.root_0
[2025-10-12 18:30:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:35 start_atlas.sh
[2025-10-12 18:30:26] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 15:35 input.tar.gz
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas 192603477 Oct 12 18:28 HITS.pool.root.1
[2025-10-12 18:30:26] -rw------- 1 boincer umatlas   1904640 Oct 12 18:30 result.tar.gz
18:30:28 (10528): run_atlas exited; CPU time 79070.653944
18:30:28 (10528): called boinc_finish(0)

</stderr_txt>
]]>

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