Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:35:57 (3878728): wrapper (7.7.26015): starting
15:35:57 (3878728): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:35:57] Arguments: --nthreads 8
[2025-10-12 15:35:57] Threads: 8
[2025-10-12 15:35:57] Checking for CVMFS
[2025-10-12 15:35:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:35:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:35:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:35:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:35:58] 2.13.2.0 24018 129689 455556 151635 2 209 29078331 32935937 40447 16776704 0 488805294 99.697 398743736 17493 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:35:58] CVMFS is ok
[2025-10-12 15:35:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:35:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:35:58] Further information can be found at the LHC@home message board.
[2025-10-12 15:35:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:35:58] Checking for apptainer binary...
[2025-10-12 15:35:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:35:58] Running /usr/bin/apptainer --version
[2025-10-12 15:35:58] apptainer version 1.4.3-1.el9
[2025-10-12 15:35:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:35:59] c7-2-16.aglt2.org
[2025-10-12 15:35:59] apptainer works
[2025-10-12 15:35:59] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:35:59] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:35:59] Starting ATLAS job with PandaID=6840531259
[2025-10-12 15:35:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:08:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:08:08] 2025-10-12 22:07:22,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:08:08] 2025-10-12 22:07:22,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:08:08] 2025-10-12 22:07:22,239 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:08:08] 2025-10-12 22:07:22,239 | INFO     | sum of square deviations: 984891556.6666657
[2025-10-12 18:08:08] 2025-10-12 22:07:22,240 | INFO     | sum of deviations: 4376198431.285711
[2025-10-12 18:08:08] 2025-10-12 22:07:22,240 | INFO     | mean x: 1760302340.5238094
[2025-10-12 18:08:08] 2025-10-12 22:07:22,240 | INFO     | mean y: 2434210.2040816327
[2025-10-12 18:08:08] 2025-10-12 22:07:22,240 | INFO     | -- intersect: -7819170401.029346
[2025-10-12 18:08:08] 2025-10-12 22:07:22,240 | INFO     | intersect: -7819170401.029346
[2025-10-12 18:08:08] 2025-10-12 22:07:22,260 | INFO     | chi2: 2.5578018296067455
[2025-10-12 18:08:08] 2025-10-12 22:07:22,261 | INFO     | sum of square deviations: 887787637.7464782
[2025-10-12 18:08:08] 2025-10-12 22:07:22,261 | INFO     | sum of deviations: 14355900057.408459
[2025-10-12 18:08:08] 2025-10-12 22:07:22,261 | INFO     | mean x: 1760302188.0422535
[2025-10-12 18:08:08] 2025-10-12 22:07:22,261 | INFO     | mean y: 2449460.5985915493
[2025-10-12 18:08:08] 2025-10-12 22:07:22,261 | INFO     | -- intersect: -28462378396.79097
[2025-10-12 18:08:08] 2025-10-12 22:07:22,262 | INFO     | intersect: -28462378396.79097
[2025-10-12 18:08:08] 2025-10-12 22:07:22,262 | INFO     | chi2: 1.7552208818493087
[2025-10-12 18:08:08] 2025-10-12 22:07:22,262 | INFO     | current chi2=1.7552208818493087 (change=31.37776110985233 %)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,262 | INFO     | sum of square deviations: 797288493.7226291
[2025-10-12 18:08:08] 2025-10-12 22:07:22,262 | INFO     | sum of deviations: 14067300597.072985
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | mean x: 1760302035.562044
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | mean y: 2448971.1678832117
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | -- intersect: -31056193002.041748
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | intersect: -31056193002.041748
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | chi2: 1.7578172888547956
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | current chi2=1.7578172888547956 (change=-0.14792480150710863 %)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | right removable region: 136
[2025-10-12 18:08:08] 2025-10-12 22:07:22,263 | INFO     | sum of square deviations: 887740667.7464782
[2025-10-12 18:08:08] 2025-10-12 22:07:22,264 | INFO     | sum of deviations: -20011850980.999996
[2025-10-12 18:08:08] 2025-10-12 22:07:22,264 | INFO     | mean x: 1760302493.0422535
[2025-10-12 18:08:08] 2025-10-12 22:07:22,264 | INFO     | mean y: 2471957.5
[2025-10-12 18:08:08] 2025-10-12 22:07:22,264 | INFO     | -- intersect: 39684005599.151855
[2025-10-12 18:08:08] 2025-10-12 22:07:22,279 | INFO     | intersect: 39684005599.151855
[2025-10-12 18:08:08] 2025-10-12 22:07:22,280 | INFO     | chi2: 0.8817942517420089
[2025-10-12 18:08:08] 2025-10-12 22:07:22,280 | INFO     | current chi2=0.8817942517420089 (change=65.52530999332416 %)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,280 | INFO     | sum of square deviations: 797194553.7226291
[2025-10-12 18:08:08] 2025-10-12 22:07:22,280 | INFO     | sum of deviations: -19828279638.89781
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | mean x: 1760302645.562044
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | mean y: 2471576.6350364964
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | -- intersect: 43785727423.41298
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | intersect: 43785727423.41298
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | chi2: 0.8688113200461598
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | current chi2=0.8688113200461598 (change=1.4723311781859472 %)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | left removable region: 20
[2025-10-12 18:08:08] 2025-10-12 22:07:22,281 | INFO     | sum of square deviations: 483903121.79310334
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | sum of deviations: -5728583668.999993
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | mean x: 1760302615.137931
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | mean y: 2483119.0
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | -- intersect: 20841449348.8741
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | intersect: 20841449348.8741
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | chi2: 0.02522182919374533
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | -- intersect: 20841449348.8741
[2025-10-12 18:08:08] 2025-10-12 22:07:22,282 | INFO     | current memory leak: -11.84 B/s (using 116 data points, chi2=0.03)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,283 | INFO     | could have reported an average CPU frequency of 3240 MHz (8 samples)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,283 | INFO     | ..............................
[2025-10-12 18:08:08] 2025-10-12 22:07:22,283 | INFO     | . Timing measurements:
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | . get job = 0 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | . initial setup = 5 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | . payload setup = 23 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | . stage-in = 0 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | . payload execution = 8953 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | . stage-out = 2 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | . log creation = 0 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,305 | INFO     | ..............................
[2025-10-12 18:08:08] 2025-10-12 22:07:22,668 | INFO     | 
[2025-10-12 18:08:08] 2025-10-12 22:07:22,668 | INFO     | job summary report
[2025-10-12 18:08:08] 2025-10-12 22:07:22,668 | INFO     | --------------------------------------------------
[2025-10-12 18:08:08] 2025-10-12 22:07:22,668 | INFO     | PanDA job id: 6840531259
[2025-10-12 18:08:08] 2025-10-12 22:07:22,668 | INFO     | task id: 46676269
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | errors: (none)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | pilot state: finished 
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | transexitcode: 0
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | exeerrorcode: 0
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | exeerrordiag: 
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | exitcode: 0
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | exitmsg: OK
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | cpuconsumptiontime: 29606 s
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | nevents: 400
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | neventsw: 0
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | pid: 3892832
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | pgrp: 3892832
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | corecount: 8
[2025-10-12 18:08:08] 2025-10-12 22:07:22,669 | INFO     | event service: False
[2025-10-12 18:08:08] 2025-10-12 22:07:22,670 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 20: 2349175, 23: 2349203, 8978: 2377270, 8982: 2386456, 8986: 2386512, 8996: 2386706}
[2025-10-12 18:08:08] 2025-10-12 22:07:22,670 | INFO     | --------------------------------------------------
[2025-10-12 18:08:08] 2025-10-12 22:07:22,670 | INFO     | 
[2025-10-12 18:08:08] 2025-10-12 22:07:22,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:08:08] 2025-10-12 22:07:22,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | job 6840531259 has completed (purged errors)
[2025-10-12 18:08:08] 2025-10-12 22:07:22,725 | INFO     | overall cleanup function is called
[2025-10-12 18:08:08] 2025-10-12 22:07:23,737 | INFO     | --- collectZombieJob: --- 10, [3892832]
[2025-10-12 18:08:08] 2025-10-12 22:07:23,737 | INFO     | zombie collector waiting for pid 3892832
[2025-10-12 18:08:08] 2025-10-12 22:07:23,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:08:08] 2025-10-12 22:07:23,738 | INFO     | collected zombie processes
[2025-10-12 18:08:08] 2025-10-12 22:07:23,738 | INFO     | will attempt to kill all subprocesses of pid=3892832
[2025-10-12 18:08:08] 2025-10-12 22:07:25,056 | INFO     | process IDs to be killed: [3892832] (in reverse order)
[2025-10-12 18:08:08] 2025-10-12 22:07:25,305 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:08:08] 2025-10-12 22:07:25,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:08:08] 2025-10-12 22:07:25,465 | INFO     | did not find any defunct processes belonging to 3892832
[2025-10-12 18:08:08] 2025-10-12 22:07:25,518 | INFO     | did not find any defunct processes belonging to 3892832
[2025-10-12 18:08:08] 2025-10-12 22:07:25,518 | INFO     | ready for new job
[2025-10-12 18:08:08] 2025-10-12 22:07:25,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:08:08] 2025-10-12 22:07:25,530 | INFO     | ***************************************
[2025-10-12 18:08:08] 2025-10-12 22:07:25,530 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 18:08:08] 2025-10-12 22:07:25,531 | INFO     | ***************************************
[2025-10-12 18:08:08] 2025-10-12 22:07:25,531 | INFO     | 
[2025-10-12 18:08:08] 2025-10-12 22:07:25,555 | INFO     | architecture information:
[2025-10-12 18:08:08] 2025-10-12 22:07:25,558 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:08:08] 2025-10-12 22:07:25,617 | INFO     | cat /etc/os-release:
[2025-10-12 18:08:08] NAME="CentOS Linux"
[2025-10-12 18:08:08] VERSION="7 (Core)"
[2025-10-12 18:08:08] ID="centos"
[2025-10-12 18:08:08] ID_LIKE="rhel fedora"
[2025-10-12 18:08:08] VERSION_ID="7"
[2025-10-12 18:08:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:08:08] ANSI_COLOR="0;31"
[2025-10-12 18:08:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:08:08] HOME_URL="https://www.centos.org/"
[2025-10-12 18:08:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:08:08] 
[2025-10-12 18:08:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:08:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:08:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:08:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:08:08] 
[2025-10-12 18:08:08] 2025-10-12 22:07:25,618 | INFO     | ***************************************
[2025-10-12 18:08:08] 2025-10-12 22:07:26,124 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:08:08] 2025-10-12 22:07:26,261 | INFO     | sufficient remaining disk space (73940336640 B)
[2025-10-12 18:08:08] 2025-10-12 22:07:26,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:08:08] 2025-10-12 22:07:26,261 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:08:08] 2025-10-12 22:07:26,261 | INFO     | update_server=False
[2025-10-12 18:08:08] 2025-10-12 22:07:26,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:08:08] 2025-10-12 22:07:26,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:08:08] 2025-10-12 22:07:26,268 | INFO     | aborting loop
[2025-10-12 18:08:08] 2025-10-12 22:07:26,820 | INFO     | all job control threads have been joined
[2025-10-12 18:08:08] 2025-10-12 22:07:26,846 | INFO     | all data control threads have been joined
[2025-10-12 18:08:08] 2025-10-12 22:07:27,129 | INFO     | all payload control threads have been joined
[2025-10-12 18:08:08] 2025-10-12 22:07:27,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:08:08] 2025-10-12 22:07:27,267 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,274 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,304 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,371 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,420 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:08:08] 2025-10-12 22:07:27,826 | INFO     | [job] control thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,852 | INFO     | [data] control thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,923 | INFO     | [job] validate thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:27,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:08:08] 2025-10-12 22:07:28,135 | INFO     | [payload] control thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:28,275 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:28,452 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:28,609 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:28,697 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:29,224 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:31,945 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:36,550 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:08:08] 2025-10-12 22:07:37,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:08:08] 2025-10-12 22:07:56,058 | INFO     | PID=3884411 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:08:08] 2025-10-12 22:07:56,090 | INFO     | .. there are 55 such processes running
[2025-10-12 18:08:08] 2025-10-12 22:07:56,091 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:08:08] 2025-10-12 22:07:56,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:08:08] 2025-10-12 22:07:56,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:08:08] 2025-10-12 22:08:02,119 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:08:08] 2025-10-12 22:08:02,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572163270464)>', '<ExcThread(monitor, started 140571821713152)>']
[2025-10-12 18:08:08] 2025-10-12 22:08:03,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:08:08] 2025-10-12 22:08:03,136 | INFO     | [monitor] control thread has ended
[2025-10-12 18:08:08] 2025-10-12 22:08:07,628 | INFO     | all workflow threads have been joined
[2025-10-12 18:08:08] 2025-10-12 22:08:07,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:08:08] 2025-10-12 22:08:07,629 | INFO     | traces error code: 0
[2025-10-12 18:08:08] 2025-10-12 22:08:07,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:08:08] 2025-10-12 22:08:08,086 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:08:08] 2025-10-12 22:08:08,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:08:08] 2025-10-12 22:08:08,112 [wrapper] pilotpid: 3884411
[2025-10-12 18:08:08] 2025-10-12 22:08:08,145 [wrapper] Pilot exit status: 0
[2025-10-12 18:08:08] 2025-10-12 22:08:08,187 [wrapper] pandaids: 6840531259
[2025-10-12 18:08:08] 2025-10-12 22:08:08,311 [wrapper] cleanup supervisor_pilot  444900 3884412
[2025-10-12 18:08:08] 2025-10-12 22:08:08,319 [wrapper] Test setup, not cleaning
[2025-10-12 18:08:08] 2025-10-12 22:08:08,345 [wrapper] apfmon messages muted
[2025-10-12 18:08:08] 2025-10-12 22:08:08,362 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:08:08] 2025-10-12 22:08:08,367 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:08:08]  *** Error codes and diagnostics ***
[2025-10-12 18:08:08]     "exeErrorCode": 0,
[2025-10-12 18:08:08]     "exeErrorDiag": "",
[2025-10-12 18:08:08]     "pilotErrorCode": 0,
[2025-10-12 18:08:08]     "pilotErrorDiag": "",
[2025-10-12 18:08:08]  *** Listing of results directory ***
[2025-10-12 18:08:08] total 403484
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:10 queuedata.json
[2025-10-12 18:08:08] -rwx------. 1 boincer umatlas     36292 Oct 12 14:12 runpilot2-wrapper.sh
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:08:08] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:35 run_atlas
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:35 job.xml
[2025-10-12 18:08:08] -rw-r--r--. 2 boincer umatlas 219471423 Oct 12 15:35 EVNT.46676267._004388.pool.root.1
[2025-10-12 18:08:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:35 start_atlas.sh
[2025-10-12 18:08:08] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:35 shared
[2025-10-12 18:08:08] -rw-r--r--. 2 boincer umatlas    576709 Oct 12 15:35 input.tar.gz
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:35 boinc_lockfile
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:35 pandaJob.out
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas    975536 Oct 12 15:36 agis_schedconf.cvmfs.json
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:08:08] drwx------. 4 boincer umatlas      4096 Oct 12 15:36 pilot3
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas      6935 Oct 12 18:00 init_data.xml
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas 186789651 Oct 12 18:06 HITS.46676269._085701.pool.root.1
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas       530 Oct 12 18:06 boinc_task_state.xml
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas      1035 Oct 12 18:07 memory_monitor_summary.json
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas    371800 Oct 12 18:07 log.46676269._085701.job.log.tgz.1
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas      7775 Oct 12 18:07 heartbeat.json
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas        95 Oct 12 18:07 pilot_heartbeat.json
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas        27 Oct 12 18:08 wrapper_checkpoint.txt
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:08 boinc_mmap_file
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas      4896 Oct 12 18:08 pilotlog.txt
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas   1128620 Oct 12 18:08 log.46676269._085701.job.log.1
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas       357 Oct 12 18:08 output.list
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:08 runtime_log
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas   1515520 Oct 12 18:08 result.tar.gz
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas       651 Oct 12 18:08 vcZMDmHjFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmteUMDmYrg6Om.diag
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 18:08 runtime_log.err
[2025-10-12 18:08:08] -rw-r--r--. 1 boincer umatlas     20973 Oct 12 18:08 stderr.txt
[2025-10-12 18:08:08] HITS file was successfully produced:
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas 186789651 Oct 12 18:06 shared/HITS.pool.root.1
[2025-10-12 18:08:08]  *** Contents of shared directory: ***
[2025-10-12 18:08:08] total 398808
[2025-10-12 18:08:08] -rw-r--r--. 2 boincer umatlas 219471423 Oct 12 15:35 ATLAS.root_0
[2025-10-12 18:08:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:35 start_atlas.sh
[2025-10-12 18:08:08] -rw-r--r--. 2 boincer umatlas    576709 Oct 12 15:35 input.tar.gz
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas 186789651 Oct 12 18:06 HITS.pool.root.1
[2025-10-12 18:08:08] -rw-------. 1 boincer umatlas   1515520 Oct 12 18:08 result.tar.gz
18:08:09 (3878728): run_atlas exited; CPU time 29849.115259
18:08:09 (3878728): called boinc_finish(0)

</stderr_txt>
]]>

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