Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:49:56 (1623626): wrapper (7.7.26015): starting
15:49:56 (1623626): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:49:56] Arguments: --nthreads 8
[2025-10-12 15:49:56] Threads: 8
[2025-10-12 15:49:56] Checking for CVMFS
[2025-10-12 15:49:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:49:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:49:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:49:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:49:58] 2.13.2.0 929169 19036 211028 151635 1 554 17476224 32935936 21855 16776704 0 56495292 99.657 51134722 31837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:49:58] CVMFS is ok
[2025-10-12 15:49:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:49:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:49:58] Further information can be found at the LHC@home message board.
[2025-10-12 15:49:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:49:58] Checking for apptainer binary...
[2025-10-12 15:49:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:49:58] Running /usr/bin/apptainer --version
[2025-10-12 15:49:58] apptainer version 1.4.3-1.el9
[2025-10-12 15:49:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:49:59] c6-4-5-2.aglt2.org
[2025-10-12 15:49:59] apptainer works
[2025-10-12 15:49:59] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:49:59] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:49:59] Starting ATLAS job with PandaID=6840390144
[2025-10-12 15:49:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:04:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:04:56] 2025-10-13 00:04:18,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:04:56] 2025-10-13 00:04:20,191 | INFO     | time since job start (15184s) is within the limit (172800.0s)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,121 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 20:04:56] 2025-10-13 00:04:21,132 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2908.7790937500004
[2025-10-12 20:04:56] 2025-10-13 00:04:21,151 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840390144/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,152 | INFO     | extracted standard info from prmon json
[2025-10-12 20:04:56] 2025-10-13 00:04:21,152 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:04:56] 2025-10-13 00:04:21,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:04:56] 2025-10-13 00:04:21,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:04:56] 2025-10-13 00:04:21,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:04:56] 2025-10-13 00:04:21,161 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:04:56] 2025-10-13 00:04:21,166 | INFO     | sum of square deviations: 4615935988.829297
[2025-10-12 20:04:56] 2025-10-13 00:04:21,168 | INFO     | sum of deviations: 66875330134.80488
[2025-10-12 20:04:56] 2025-10-13 00:04:21,168 | INFO     | mean x: 1760306311.8292682
[2025-10-12 20:04:56] 2025-10-13 00:04:21,168 | INFO     | mean y: 2080057.138211382
[2025-10-12 20:04:56] 2025-10-13 00:04:21,168 | INFO     | -- intersect: -25501104134.941486
[2025-10-12 20:04:56] 2025-10-13 00:04:21,168 | INFO     | intersect: -25501104134.941486
[2025-10-12 20:04:56] 2025-10-13 00:04:21,168 | INFO     | chi2: 3.333470616541526
[2025-10-12 20:04:56] 2025-10-13 00:04:21,169 | INFO     | sum of square deviations: 4340169475.7759
[2025-10-12 20:04:56] 2025-10-13 00:04:21,170 | INFO     | sum of deviations: 80018715447.90872
[2025-10-12 20:04:56] 2025-10-13 00:04:21,170 | INFO     | mean x: 1760306159.3360996
[2025-10-12 20:04:56] 2025-10-13 00:04:21,170 | INFO     | mean y: 2087194.1369294606
[2025-10-12 20:04:56] 2025-10-13 00:04:21,170 | INFO     | -- intersect: -32452276270.537476
[2025-10-12 20:04:56] 2025-10-13 00:04:21,170 | INFO     | intersect: -32452276270.537476
[2025-10-12 20:04:56] 2025-10-13 00:04:21,171 | INFO     | chi2: 2.5578561588225144
[2025-10-12 20:04:56] 2025-10-13 00:04:21,172 | INFO     | current chi2=2.5578561588225144 (change=23.26747546146698 %)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,172 | INFO     | right removable region: 240
[2025-10-12 20:04:56] 2025-10-13 00:04:21,172 | INFO     | sum of square deviations: 4340120065.7759
[2025-10-12 20:04:56] 2025-10-13 00:04:21,173 | INFO     | sum of deviations: 18818927226.726135
[2025-10-12 20:04:56] 2025-10-13 00:04:21,173 | INFO     | mean x: 1760306464.3360996
[2025-10-12 20:04:56] 2025-10-13 00:04:21,174 | INFO     | mean y: 2106523.410788382
[2025-10-12 20:04:56] 2025-10-13 00:04:21,174 | INFO     | -- intersect: -7630649885.864812
[2025-10-12 20:04:56] 2025-10-13 00:04:21,174 | INFO     | intersect: -7630649885.864812
[2025-10-12 20:04:56] 2025-10-13 00:04:21,174 | INFO     | chi2: 1.1620983342826658
[2025-10-12 20:04:56] 2025-10-13 00:04:21,174 | INFO     | current chi2=1.1620983342826658 (change=65.13848574167598 %)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,174 | INFO     | sum of square deviations: 4075528233.881352
[2025-10-12 20:04:56] 2025-10-13 00:04:21,176 | INFO     | sum of deviations: 3822139080.7881355
[2025-10-12 20:04:56] 2025-10-13 00:04:21,176 | INFO     | mean x: 1760306616.838983
[2025-10-12 20:04:56] 2025-10-13 00:04:21,176 | INFO     | mean y: 2115130.283898305
[2025-10-12 20:04:56] 2025-10-13 00:04:21,176 | INFO     | -- intersect: -1648747366.1298842
[2025-10-12 20:04:56] 2025-10-13 00:04:21,176 | INFO     | intersect: -1648747366.1298842
[2025-10-12 20:04:56] 2025-10-13 00:04:21,176 | INFO     | chi2: 0.9623548142120475
[2025-10-12 20:04:56] 2025-10-13 00:04:21,176 | INFO     | current chi2=0.9623548142120475 (change=17.18817712564015 %)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,177 | INFO     | left removable region: 20
[2025-10-12 20:04:56] 2025-10-13 00:04:21,177 | INFO     | sum of square deviations: 3301550470.1090736
[2025-10-12 20:04:56] 2025-10-13 00:04:21,178 | INFO     | sum of deviations: 20713379918.25456
[2025-10-12 20:04:56] 2025-10-13 00:04:21,178 | INFO     | mean x: 1760306738.8363636
[2025-10-12 20:04:56] 2025-10-13 00:04:21,178 | INFO     | mean y: 2120736.368181818
[2025-10-12 20:04:56] 2025-10-13 00:04:21,178 | INFO     | -- intersect: -11041751706.077536
[2025-10-12 20:04:56] 2025-10-13 00:04:21,178 | INFO     | intersect: -11041751706.077536
[2025-10-12 20:04:56] 2025-10-13 00:04:21,179 | INFO     | chi2: 0.11246199301927565
[2025-10-12 20:04:56] 2025-10-13 00:04:21,179 | INFO     | -- intersect: -11041751706.077536
[2025-10-12 20:04:56] 2025-10-13 00:04:21,179 | INFO     | current memory leak: 6.27 B/s (using 220 data points, chi2=0.11)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,179 | INFO     | could have reported an average CPU frequency of 2912 MHz (12 samples)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | ..............................
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . Timing measurements:
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . get job = 1 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . initial setup = 12 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . payload setup = 45 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . stage-in = 0 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . payload execution = 15018 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . stage-out = 3 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | . log creation = 0 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,180 | INFO     | ..............................
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | 
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | job summary report
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | --------------------------------------------------
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | PanDA job id: 6840390144
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | task id: 46676269
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | errors: (none)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:04:56] 2025-10-13 00:04:21,486 | INFO     | pilot state: finished 
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | transexitcode: 0
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | exeerrorcode: 0
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | exeerrordiag: 
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | exitcode: 0
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | exitmsg: OK
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | cpuconsumptiontime: 40084 s
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | nevents: 400
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | neventsw: 0
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | pid: 1643510
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | pgrp: 1643510
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | corecount: 8
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | event service: False
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 3: 2348913, 14: 2348941, 26: 2348969, 38: 2349387, 49: 2349415, 15067: 2380370, 15068: 2380369, 15072: 2389423, 15074: 
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | --------------------------------------------------
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | 
[2025-10-12 20:04:56] 2025-10-13 00:04:21,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 20:04:56] 2025-10-13 00:04:21,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:04:56] 2025-10-13 00:04:21,535 | INFO     | job 6840390144 has completed (purged errors)
[2025-10-12 20:04:56] 2025-10-13 00:04:21,535 | INFO     | overall cleanup function is called
[2025-10-12 20:04:56] 2025-10-13 00:04:22,548 | INFO     | --- collectZombieJob: --- 10, [1643510]
[2025-10-12 20:04:56] 2025-10-13 00:04:22,548 | INFO     | zombie collector waiting for pid 1643510
[2025-10-12 20:04:56] 2025-10-13 00:04:22,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:04:56] 2025-10-13 00:04:22,548 | INFO     | collected zombie processes
[2025-10-12 20:04:56] 2025-10-13 00:04:22,548 | INFO     | will attempt to kill all subprocesses of pid=1643510
[2025-10-12 20:04:56] 2025-10-13 00:04:23,164 | INFO     | process IDs to be killed: [1643510] (in reverse order)
[2025-10-12 20:04:56] 2025-10-13 00:04:23,398 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:04:56] 2025-10-13 00:04:23,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:04:56] 2025-10-13 00:04:23,422 | INFO     | did not find any defunct processes belonging to 1643510
[2025-10-12 20:04:56] 2025-10-13 00:04:23,441 | INFO     | did not find any defunct processes belonging to 1643510
[2025-10-12 20:04:56] 2025-10-13 00:04:23,441 | INFO     | ready for new job
[2025-10-12 20:04:56] 2025-10-13 00:04:23,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:04:56] 2025-10-13 00:04:23,447 | INFO     | ***************************************
[2025-10-12 20:04:56] 2025-10-13 00:04:23,448 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:04:56] 2025-10-13 00:04:23,448 | INFO     | ***************************************
[2025-10-12 20:04:56] 2025-10-13 00:04:23,448 | INFO     | 
[2025-10-12 20:04:56] 2025-10-13 00:04:23,465 | INFO     | architecture information:
[2025-10-12 20:04:56] 2025-10-13 00:04:23,469 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:04:56] 2025-10-13 00:04:23,507 | INFO     | cat /etc/os-release:
[2025-10-12 20:04:56] NAME="CentOS Linux"
[2025-10-12 20:04:56] VERSION="7 (Core)"
[2025-10-12 20:04:56] ID="centos"
[2025-10-12 20:04:56] ID_LIKE="rhel fedora"
[2025-10-12 20:04:56] VERSION_ID="7"
[2025-10-12 20:04:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:04:56] ANSI_COLOR="0;31"
[2025-10-12 20:04:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:04:56] HOME_URL="https://www.centos.org/"
[2025-10-12 20:04:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:04:56] 
[2025-10-12 20:04:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:04:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:04:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:04:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:04:56] 
[2025-10-12 20:04:56] 2025-10-13 00:04:23,507 | INFO     | ***************************************
[2025-10-12 20:04:56] 2025-10-13 00:04:24,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 20:04:56] 2025-10-13 00:04:24,051 | INFO     | sufficient remaining disk space (75269931008 B)
[2025-10-12 20:04:56] 2025-10-13 00:04:24,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:04:56] 2025-10-13 00:04:24,051 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:04:56] 2025-10-13 00:04:24,052 | INFO     | update_server=False
[2025-10-12 20:04:56] 2025-10-13 00:04:24,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:04:56] 2025-10-13 00:04:24,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:04:56] 2025-10-13 00:04:24,538 | INFO     | all job control threads have been joined
[2025-10-12 20:04:56] 2025-10-13 00:04:24,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:04:56] 2025-10-13 00:04:24,890 | INFO     | aborting loop
[2025-10-12 20:04:56] 2025-10-13 00:04:24,906 | INFO     | all data control threads have been joined
[2025-10-12 20:04:56] 2025-10-13 00:04:25,058 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:25,064 | INFO     | all payload control threads have been joined
[2025-10-12 20:04:56] 2025-10-13 00:04:25,207 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:25,544 | INFO     | [job] control thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:25,704 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:25,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:25,754 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:25,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:04:56] 2025-10-13 00:04:25,896 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:25,937 | INFO     | [data] control thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:26,060 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:26,108 | INFO     | [payload] control thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:26,141 | INFO     | [job] validate thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:26,203 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:26,321 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:26,462 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:26,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:04:56] 2025-10-13 00:04:27,507 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:29,804 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:04:56] 2025-10-13 00:04:42,248 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:04:56] 2025-10-13 00:04:43,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935270516544)>', '<ExcThread(monitor, started 139934782445312)>']
[2025-10-12 20:04:56] 2025-10-13 00:04:48,272 | INFO     | all workflow threads have been joined
[2025-10-12 20:04:56] 2025-10-13 00:04:48,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:04:56] 2025-10-13 00:04:48,272 | INFO     | traces error code: 0
[2025-10-12 20:04:56] 2025-10-13 00:04:48,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:04:56] 2025-10-13 00:04:55,012 | INFO     | PID=1631975 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:04:56] 2025-10-13 00:04:55,012 | INFO     | .. there are 28 such processes running
[2025-10-12 20:04:56] 2025-10-13 00:04:55,013 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:04:56] 2025-10-13 00:04:55,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:04:56] 2025-10-13 00:04:55,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:04:56] 2025-10-13 00:04:55,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:04:56] 2025-10-13 00:04:55,013 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 20:04:56] 2025-10-13 00:04:55,014 | INFO     | [monitor] control thread has ended
[2025-10-12 20:04:56] 2025-10-13 00:04:55,311 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:04:56] 2025-10-13 00:04:55,329 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:04:56] 2025-10-13 00:04:55,345 [wrapper] pilotpid: 1631975
[2025-10-12 20:04:56] 2025-10-13 00:04:55,365 [wrapper] Pilot exit status: 0
[2025-10-12 20:04:56] 2025-10-13 00:04:55,480 [wrapper] pandaids: 6840390144
[2025-10-12 20:04:56] 2025-10-13 00:04:55,879 [wrapper] cleanup supervisor_pilot 2530882 1631976
[2025-10-12 20:04:56] 2025-10-13 00:04:55,891 [wrapper] Test setup, not cleaning
[2025-10-12 20:04:56] 2025-10-13 00:04:55,910 [wrapper] apfmon messages muted
[2025-10-12 20:04:56] 2025-10-13 00:04:55,926 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:04:56] 2025-10-13 00:04:55,950 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:04:56]  *** Error codes and diagnostics ***
[2025-10-12 20:04:56]     "exeErrorCode": 0,
[2025-10-12 20:04:56]     "exeErrorDiag": "",
[2025-10-12 20:04:56]     "pilotErrorCode": 0,
[2025-10-12 20:04:56]     "pilotErrorDiag": "",
[2025-10-12 20:04:56]  *** Listing of results directory ***
[2025-10-12 20:04:56] total 411468
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:18 queuedata.json
[2025-10-12 20:04:56] -rwx------. 1 boincer umatlas     36292 Oct 12 12:18 runpilot2-wrapper.sh
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:04:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:49 run_atlas
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:49 job.xml
[2025-10-12 20:04:56] -rw-r--r--. 2 boincer umatlas 220313920 Oct 12 15:49 EVNT.46676267._004733.pool.root.1
[2025-10-12 20:04:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:49 shared
[2025-10-12 20:04:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 15:49 input.tar.gz
[2025-10-12 20:04:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:49 start_atlas.sh
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:49 boinc_lockfile
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:49 pandaJob.out
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas    975536 Oct 12 15:51 agis_schedconf.cvmfs.json
[2025-10-12 20:04:56] drwx------. 5 boincer umatlas      4096 Oct 12 15:51 pilot3
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas      6857 Oct 12 20:02 init_data.xml
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas 192363488 Oct 12 20:02 HITS.46676269._083270.pool.root.1
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas       531 Oct 12 20:02 boinc_task_state.xml
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas      1043 Oct 12 20:03 memory_monitor_summary.json
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas    466417 Oct 12 20:03 log.46676269._083270.job.log.tgz.1
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas      7827 Oct 12 20:04 heartbeat.json
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas        28 Oct 12 20:04 wrapper_checkpoint.txt
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas        95 Oct 12 20:04 pilot_heartbeat.json
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas       893 Oct 12 20:04 pilotlog.txt
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas   1916339 Oct 12 20:04 log.46676269._083270.job.log.1
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:04 boinc_mmap_file
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas       357 Oct 12 20:04 output.list
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:04 runtime_log
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas   2406400 Oct 12 20:04 result.tar.gz
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 20:04 runtime_log.err
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas       655 Oct 12 20:04 NFZMDmTxDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDbkNDmanBNpm.diag
[2025-10-12 20:04:56] -rw-r--r--. 1 boincer umatlas     21228 Oct 12 20:04 stderr.txt
[2025-10-12 20:04:56] HITS file was successfully produced:
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas 192363488 Oct 12 20:02 shared/HITS.pool.root.1
[2025-10-12 20:04:56]  *** Contents of shared directory: ***
[2025-10-12 20:04:56] total 405940
[2025-10-12 20:04:56] -rw-r--r--. 2 boincer umatlas 220313920 Oct 12 15:49 ATLAS.root_0
[2025-10-12 20:04:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 15:49 input.tar.gz
[2025-10-12 20:04:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:49 start_atlas.sh
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas 192363488 Oct 12 20:02 HITS.pool.root.1
[2025-10-12 20:04:56] -rw-------. 1 boincer umatlas   2406400 Oct 12 20:04 result.tar.gz
20:04:58 (1623626): run_atlas exited; CPU time 40562.457159
20:04:58 (1623626): called boinc_finish(0)

</stderr_txt>
]]>

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