Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:59:00 (2452183): wrapper (7.7.26015): starting
06:59:00 (2452183): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 06:59:00] Arguments: --nthreads 2
[2025-10-13 06:59:00] Threads: 2
[2025-10-13 06:59:00] Checking for CVMFS
[2025-10-13 06:59:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:59:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:59:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:59:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:59:00] 2.9.2.0 1210534 5305 59132 151649 1 57 28250572 36864001 0 130560 0 3254442 99.989 180638 746 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 06:59:00] CVMFS is ok
[2025-10-13 06:59:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:59:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:59:00] Further information can be found at the LHC@home message board.
[2025-10-13 06:59:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:59:00] Checking for apptainer binary...
[2025-10-13 06:59:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:59:00] Running /usr/bin/apptainer --version
[2025-10-13 06:59:00] apptainer version 1.4.1-1.1
[2025-10-13 06:59:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:59:00] thA369
[2025-10-13 06:59:00] apptainer works
[2025-10-13 06:59:00] Set ATHENA_PROC_NUMBER=2
[2025-10-13 06:59:00] Set ATHENA_CORE_NUMBER=2
[2025-10-13 06:59:00] Starting ATLAS job with PandaID=6840182099
[2025-10-13 06:59:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:04:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:04:52] 2025-10-13 07:04:22,519 | INFO     | aborting loop
[2025-10-13 09:04:52] 2025-10-13 07:04:22,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:04:52] 2025-10-13 07:04:22,707 | INFO     | all job control threads have been joined
[2025-10-13 09:04:52] 2025-10-13 07:04:23,036 | INFO     | all data control threads have been joined
[2025-10-13 09:04:52] 2025-10-13 07:04:23,380 | INFO     | all payload control threads have been joined
[2025-10-13 09:04:52] 2025-10-13 07:04:23,524 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:23,524 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:23,524 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:23,713 | INFO     | [job] control thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:23,792 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:04:52] 2025-10-13 07:04:23,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:04:52] 2025-10-13 07:04:23,916 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:23,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:04:52] 2025-10-13 07:04:24,042 | INFO     | [data] control thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:24,145 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:24,385 | INFO     | [payload] control thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:24,444 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:24,531 | INFO     | [job] validate thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:24,651 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:24,682 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:24,683 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:25,088 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:25,844 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:28,002 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:04:52] 2025-10-13 07:04:29,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807192708928)>', '<ExcThread(monitor, started 139806470297344)>']
[2025-10-13 09:04:52] 2025-10-13 07:04:34,728 | INFO     | all workflow threads have been joined
[2025-10-13 09:04:52] 2025-10-13 07:04:34,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:04:52] 2025-10-13 07:04:34,729 | INFO     | traces error code: 0
[2025-10-13 09:04:52] 2025-10-13 07:04:34,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:04:52] 2025-10-13 07:04:52,815 | INFO     | PID=2455890 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:04:52] 2025-10-13 07:04:52,816 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:04:52] 2025-10-13 07:04:52,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:04:52] 2025-10-13 07:04:52,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:04:52] 2025-10-13 07:04:52,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:04:52] 2025-10-13 07:04:52,816 | INFO     | [monitor] control thread has ended
[2025-10-13 09:04:52] 2025-10-13 07:04:52,855 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:04:52] 2025-10-13 07:04:52,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:04:52] 2025-10-13 07:04:52,859 [wrapper] pilotpid: 2455890
[2025-10-13 09:04:52] 2025-10-13 07:04:52,861 [wrapper] Pilot exit status: 0
[2025-10-13 09:04:52] 2025-10-13 07:04:52,867 [wrapper] pandaids: 6840182099
[2025-10-13 09:04:52] 2025-10-13 07:04:52,879 [wrapper] cleanup supervisor_pilot 2476883 2455891
[2025-10-13 09:04:52] 2025-10-13 07:04:52,881 [wrapper] Test setup, not cleaning
[2025-10-13 09:04:52] 2025-10-13 07:04:52,883 [wrapper] apfmon messages muted
[2025-10-13 09:04:52] 2025-10-13 07:04:52,885 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:04:52] 2025-10-13 07:04:52,887 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:04:52]  *** Error codes and diagnostics ***
[2025-10-13 09:04:52]     "exeErrorCode": 0,
[2025-10-13 09:04:52]     "exeErrorDiag": "",
[2025-10-13 09:04:52]     "pilotErrorCode": 0,
[2025-10-13 09:04:52]     "pilotErrorDiag": "",
[2025-10-13 09:04:52]  *** Listing of results directory ***
[2025-10-13 09:04:52] total 412976
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:34 queuedata.json
[2025-10-13 09:04:52] -rwx------ 1 boinc boinc     36292 Oct 12 16:34 runpilot2-wrapper.sh
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:04:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:59 run_atlas
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:59 job.xml
[2025-10-13 09:04:52] -rw-r--r-- 2 boinc boinc 220288751 Oct 13 06:59 EVNT.46676267._004340.pool.root.1
[2025-10-13 09:04:52] -rw-r--r-- 2 boinc boinc    569682 Oct 13 06:59 input.tar.gz
[2025-10-13 09:04:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:59 start_atlas.sh
[2025-10-13 09:04:52] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:59 shared
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:59 boinc_setup_complete
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc      6206 Oct 13 06:59 init_data.xml
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:59 boinc_lockfile
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:59 pandaJob.out
[2025-10-13 09:04:52] -rw------- 1 boinc boinc    974365 Oct 13 06:59 agis_schedconf.cvmfs.json
[2025-10-13 09:04:52] -rw------- 1 boinc boinc   1560580 Oct 13 06:59 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:04:52] drwx------ 5 boinc boinc      4096 Oct 13 06:59 pilot3
[2025-10-13 09:04:52] -rw------- 1 boinc boinc 195972714 Oct 13 09:03 HITS.46676269._080959.pool.root.1
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:04 boinc_task_state.xml
[2025-10-13 09:04:52] -rw------- 1 boinc boinc      1017 Oct 13 09:04 memory_monitor_summary.json
[2025-10-13 09:04:52] -rw------- 1 boinc boinc    288657 Oct 13 09:04 log.46676269._080959.job.log.tgz.1
[2025-10-13 09:04:52] -rw------- 1 boinc boinc      7753 Oct 13 09:04 heartbeat.json
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:04 boinc_mmap_file
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:04 wrapper_checkpoint.txt
[2025-10-13 09:04:52] -rw------- 1 boinc boinc       747 Oct 13 09:04 pilotlog.txt
[2025-10-13 09:04:52] -rw------- 1 boinc boinc        95 Oct 13 09:04 pilot_heartbeat.json
[2025-10-13 09:04:52] -rw------- 1 boinc boinc   1085044 Oct 13 09:04 log.46676269._080959.job.log.1
[2025-10-13 09:04:52] -rw------- 1 boinc boinc       357 Oct 13 09:04 output.list
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:04 runtime_log
[2025-10-13 09:04:52] -rw------- 1 boinc boinc   1392640 Oct 13 09:04 result.tar.gz
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc      8777 Oct 13 09:04 runtime_log.err
[2025-10-13 09:04:52] -rw------- 1 boinc boinc       659 Oct 13 09:04 34eLDmlKCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmU8TMDmqIuVen.diag
[2025-10-13 09:04:52] -rw-r--r-- 1 boinc boinc      7067 Oct 13 09:04 stderr.txt
[2025-10-13 09:04:52] HITS file was successfully produced:
[2025-10-13 09:04:52] -rw------- 1 boinc boinc 195972714 Oct 13 09:03 shared/HITS.pool.root.1
[2025-10-13 09:04:52]  *** Contents of shared directory: ***
[2025-10-13 09:04:52] total 408452
[2025-10-13 09:04:52] -rw-r--r-- 2 boinc boinc 220288751 Oct 13 06:59 ATLAS.root_0
[2025-10-13 09:04:52] -rw-r--r-- 2 boinc boinc    569682 Oct 13 06:59 input.tar.gz
[2025-10-13 09:04:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:59 start_atlas.sh
[2025-10-13 09:04:52] -rw------- 1 boinc boinc 195972714 Oct 13 09:03 HITS.pool.root.1
[2025-10-13 09:04:52] -rw------- 1 boinc boinc   1392640 Oct 13 09:04 result.tar.gz
09:04:54 (2452183): run_atlas exited; CPU time 14615.875881
09:04:54 (2452183): called boinc_finish(0)

</stderr_txt>
]]>

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