Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:33:46 (26641): wrapper (7.7.26015): starting
15:33:46 (26641): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:33:46] Arguments: --nthreads 8
[2025-10-12 15:33:46] Threads: 8
[2025-10-12 15:33:46] Checking for CVMFS
[2025-10-12 15:33:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:33:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:33:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:33:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:33:46] 2.11.2.0 12825 53285 127672 151635 0 57 17213673 18432001 1833 130560 0 47526276 99.978 2073840 20401 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:33:46] CVMFS is ok
[2025-10-12 15:33:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:33:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:33:46] Further information can be found at the LHC@home message board.
[2025-10-12 15:33:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:33:46] Checking for apptainer binary...
[2025-10-12 15:33:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:33:46] Running /usr/bin/apptainer --version
[2025-10-12 15:33:46] apptainer version 1.3.2-1.el7
[2025-10-12 15:33:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:33:47] c-206-8.aglt2.org
[2025-10-12 15:33:47] apptainer works
[2025-10-12 15:33:47] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:33:47] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:33:47] Starting ATLAS job with PandaID=6840225013
[2025-10-12 15:33:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:38:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:38:22] 2025-10-12 22:37:27,147 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 18:38:22] 2025-10-12 22:37:27,154 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2355.9166666666665
[2025-10-12 18:38:22] 2025-10-12 22:37:27,158 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840225013/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,159 | INFO     | extracted standard info from prmon json
[2025-10-12 18:38:22] 2025-10-12 22:37:27,159 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:38:22] 2025-10-12 22:37:27,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:38:22] 2025-10-12 22:37:27,160 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:38:22] 2025-10-12 22:37:27,160 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:38:22] 2025-10-12 22:37:27,166 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:38:22] 2025-10-12 22:37:27,166 | INFO     | sum of square deviations: 1808350185.0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,168 | INFO     | sum of deviations: -4275921514.0000024
[2025-10-12 18:38:22] 2025-10-12 22:37:27,168 | INFO     | mean x: 1760303123.5
[2025-10-12 18:38:22] 2025-10-12 22:37:27,168 | INFO     | mean y: 2518918.688888889
[2025-10-12 18:38:22] 2025-10-12 22:37:27,168 | INFO     | -- intersect: 4164831096.589904
[2025-10-12 18:38:22] 2025-10-12 22:37:27,168 | INFO     | intersect: 4164831096.589904
[2025-10-12 18:38:22] 2025-10-12 22:37:27,169 | INFO     | chi2: 1.7108876011044405
[2025-10-12 18:38:22] 2025-10-12 22:37:27,169 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,171 | INFO     | sum of deviations: -3854804170.9999924
[2025-10-12 18:38:22] 2025-10-12 22:37:27,171 | INFO     | mean x: 1760302971.0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,171 | INFO     | mean y: 2519357.0342857144
[2025-10-12 18:38:22] 2025-10-12 22:37:27,171 | INFO     | -- intersect: 4085819965.6847434
[2025-10-12 18:38:22] 2025-10-12 22:37:27,171 | INFO     | intersect: 4085819965.6847434
[2025-10-12 18:38:22] 2025-10-12 22:37:27,172 | INFO     | chi2: 1.711082106846751
[2025-10-12 18:38:22] 2025-10-12 22:37:27,172 | INFO     | current chi2=1.711082106846751 (change=-0.011368703717587395 %)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,172 | INFO     | right removable region: 174
[2025-10-12 18:38:22] 2025-10-12 22:37:27,173 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,173 | INFO     | sum of deviations: -33170458549.0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,174 | INFO     | mean x: 1760303276.0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,174 | INFO     | mean y: 2548640.9885714287
[2025-10-12 18:38:22] 2025-10-12 22:37:27,174 | INFO     | -- intersect: 35139217338.523224
[2025-10-12 18:38:22] 2025-10-12 22:37:27,174 | INFO     | intersect: 35139217338.523224
[2025-10-12 18:38:22] 2025-10-12 22:37:27,174 | INFO     | chi2: 0.16949856382296452
[2025-10-12 18:38:22] 2025-10-12 22:37:27,174 | INFO     | current chi2=0.16949856382296452 (change=90.09294569008817 %)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,175 | INFO     | sum of square deviations: 1523386702.5
[2025-10-12 18:38:22] 2025-10-12 22:37:27,175 | INFO     | sum of deviations: -32274022099.500004
[2025-10-12 18:38:22] 2025-10-12 22:37:27,175 | INFO     | mean x: 1760303428.5
[2025-10-12 18:38:22] 2025-10-12 22:37:27,176 | INFO     | mean y: 2547591.217647059
[2025-10-12 18:38:22] 2025-10-12 22:37:27,176 | INFO     | -- intersect: 37295817684.754265
[2025-10-12 18:38:22] 2025-10-12 22:37:27,176 | INFO     | intersect: 37295817684.754265
[2025-10-12 18:38:22] 2025-10-12 22:37:27,176 | INFO     | chi2: 0.15025442595355612
[2025-10-12 18:38:22] 2025-10-12 22:37:27,176 | INFO     | current chi2=0.15025442595355612 (change=11.353569868301804 %)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,176 | INFO     | left removable region: 20
[2025-10-12 18:38:22] 2025-10-12 22:37:27,177 | INFO     | sum of square deviations: 1132458442.5
[2025-10-12 18:38:22] 2025-10-12 22:37:27,177 | INFO     | sum of deviations: -20974872417.499996
[2025-10-12 18:38:22] 2025-10-12 22:37:27,177 | INFO     | mean x: 1760303550.5
[2025-10-12 18:38:22] 2025-10-12 22:37:27,178 | INFO     | time since job start (11009s) is within the limit (172800.0s)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,178 | INFO     | mean y: 2536293.9285714286
[2025-10-12 18:38:22] 2025-10-12 22:37:27,178 | INFO     | -- intersect: 32606065926.593002
[2025-10-12 18:38:22] 2025-10-12 22:37:27,178 | INFO     | intersect: 32606065926.593002
[2025-10-12 18:38:22] 2025-10-12 22:37:27,178 | INFO     | chi2: 0.13084248276671315
[2025-10-12 18:38:22] 2025-10-12 22:37:27,178 | INFO     | -- intersect: 32606065926.593002
[2025-10-12 18:38:22] 2025-10-12 22:37:27,179 | INFO     | current memory leak: -18.52 B/s (using 154 data points, chi2=0.13)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,179 | INFO     | could have reported an average CPU frequency of 2564 MHz (9 samples)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,179 | INFO     | ..............................
[2025-10-12 18:38:22] 2025-10-12 22:37:27,179 | INFO     | . Timing measurements:
[2025-10-12 18:38:22] 2025-10-12 22:37:27,179 | INFO     | . get job = 0 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,179 | INFO     | . initial setup = 2 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,179 | INFO     | . payload setup = 5 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,180 | INFO     | . stage-in = 0 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,180 | INFO     | . payload execution = 10971 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,180 | INFO     | . stage-out = 2 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,180 | INFO     | . log creation = 0 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,180 | INFO     | ..............................
[2025-10-12 18:38:22] 2025-10-12 22:37:27,678 | INFO     | 
[2025-10-12 18:38:22] 2025-10-12 22:37:27,678 | INFO     | job summary report
[2025-10-12 18:38:22] 2025-10-12 22:37:27,678 | INFO     | --------------------------------------------------
[2025-10-12 18:38:22] 2025-10-12 22:37:27,678 | INFO     | PanDA job id: 6840225013
[2025-10-12 18:38:22] 2025-10-12 22:37:27,678 | INFO     | task id: 46676269
[2025-10-12 18:38:22] 2025-10-12 22:37:27,679 | INFO     | errors: (none)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:38:22] 2025-10-12 22:37:27,679 | INFO     | pilot state: finished 
[2025-10-12 18:38:22] 2025-10-12 22:37:27,679 | INFO     | transexitcode: 0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,679 | INFO     | exeerrorcode: 0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,679 | INFO     | exeerrordiag: 
[2025-10-12 18:38:22] 2025-10-12 22:37:27,680 | INFO     | exitcode: 0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,680 | INFO     | exitmsg: OK
[2025-10-12 18:38:22] 2025-10-12 22:37:27,680 | INFO     | cpuconsumptiontime: 82956 s
[2025-10-12 18:38:22] 2025-10-12 22:37:27,680 | INFO     | nevents: 400
[2025-10-12 18:38:22] 2025-10-12 22:37:27,680 | INFO     | neventsw: 0
[2025-10-12 18:38:22] 2025-10-12 22:37:27,680 | INFO     | pid: 4464
[2025-10-12 18:38:22] 2025-10-12 22:37:27,681 | INFO     | pgrp: 4464
[2025-10-12 18:38:22] 2025-10-12 22:37:27,681 | INFO     | corecount: 8
[2025-10-12 18:38:22] 2025-10-12 22:37:27,681 | INFO     | event service: False
[2025-10-12 18:38:22] 2025-10-12 22:37:27,681 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10979: 2378187, 10983: 2387185, 10986: 2387369, 10992: 2387627}
[2025-10-12 18:38:22] 2025-10-12 22:37:27,681 | INFO     | --------------------------------------------------
[2025-10-12 18:38:22] 2025-10-12 22:37:27,681 | INFO     | 
[2025-10-12 18:38:22] 2025-10-12 22:37:27,682 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:38:22] 2025-10-12 22:37:27,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,704 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,705 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:38:22] 2025-10-12 22:37:27,707 | INFO     | job 6840225013 has completed (purged errors)
[2025-10-12 18:38:22] 2025-10-12 22:37:27,707 | INFO     | overall cleanup function is called
[2025-10-12 18:38:22] 2025-10-12 22:37:28,376 | INFO     | PID=30319 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 18:38:22] 2025-10-12 22:37:28,377 | INFO     | .. there are 3 such processes running
[2025-10-12 18:38:22] 2025-10-12 22:37:28,715 | INFO     | --- collectZombieJob: --- 10, [4464]
[2025-10-12 18:38:22] 2025-10-12 22:37:28,715 | INFO     | zombie collector waiting for pid 4464
[2025-10-12 18:38:22] 2025-10-12 22:37:28,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:38:22] 2025-10-12 22:37:28,715 | INFO     | collected zombie processes
[2025-10-12 18:38:22] 2025-10-12 22:37:28,715 | INFO     | will attempt to kill all subprocesses of pid=4464
[2025-10-12 18:38:22] 2025-10-12 22:37:28,861 | INFO     | process IDs to be killed: [4464] (in reverse order)
[2025-10-12 18:38:22] 2025-10-12 22:37:28,901 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:38:22] 2025-10-12 22:37:28,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:38:22] 2025-10-12 22:37:28,904 | INFO     | did not find any defunct processes belonging to 4464
[2025-10-12 18:38:22] 2025-10-12 22:37:28,906 | INFO     | did not find any defunct processes belonging to 4464
[2025-10-12 18:38:22] 2025-10-12 22:37:28,906 | INFO     | ready for new job
[2025-10-12 18:38:22] 2025-10-12 22:37:28,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:38:22] 2025-10-12 22:37:28,908 | INFO     | ***************************************
[2025-10-12 18:38:22] 2025-10-12 22:37:28,908 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:38:22] 2025-10-12 22:37:28,908 | INFO     | ***************************************
[2025-10-12 18:38:22] 2025-10-12 22:37:28,908 | INFO     | 
[2025-10-12 18:38:22] 2025-10-12 22:37:28,909 | INFO     | architecture information:
[2025-10-12 18:38:22] 2025-10-12 22:37:28,909 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:38:22] 2025-10-12 22:37:28,919 | INFO     | cat /etc/os-release:
[2025-10-12 18:38:22] NAME="CentOS Linux"
[2025-10-12 18:38:22] VERSION="7 (Core)"
[2025-10-12 18:38:22] ID="centos"
[2025-10-12 18:38:22] ID_LIKE="rhel fedora"
[2025-10-12 18:38:22] VERSION_ID="7"
[2025-10-12 18:38:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:38:22] ANSI_COLOR="0;31"
[2025-10-12 18:38:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:38:22] HOME_URL="https://www.centos.org/"
[2025-10-12 18:38:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:38:22] 
[2025-10-12 18:38:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:38:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:38:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:38:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:38:22] 
[2025-10-12 18:38:22] 2025-10-12 22:37:28,920 | INFO     | ***************************************
[2025-10-12 18:38:22] 2025-10-12 22:37:29,422 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:38:22] 2025-10-12 22:37:29,436 | INFO     | sufficient remaining disk space (28175237120 B)
[2025-10-12 18:38:22] 2025-10-12 22:37:29,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:38:22] 2025-10-12 22:37:29,436 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:38:22] 2025-10-12 22:37:29,437 | INFO     | update_server=False
[2025-10-12 18:38:22] 2025-10-12 22:37:29,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:38:22] 2025-10-12 22:37:29,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:38:22] 2025-10-12 22:37:29,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:38:22] 2025-10-12 22:37:29,438 | INFO     | aborting loop
[2025-10-12 18:38:22] 2025-10-12 22:37:29,675 | INFO     | all data control threads have been joined
[2025-10-12 18:38:22] 2025-10-12 22:37:29,746 | INFO     | all job control threads have been joined
[2025-10-12 18:38:22] 2025-10-12 22:37:30,442 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:30,443 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:30,455 | INFO     | all payload control threads have been joined
[2025-10-12 18:38:22] 2025-10-12 22:37:30,456 | INFO     | [job] validate thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:30,681 | INFO     | [data] control thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:30,738 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:30,751 | INFO     | [job] control thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,256 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,277 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,336 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,390 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,432 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:38:22] 2025-10-12 22:37:31,442 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:31,460 | INFO     | [payload] control thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:32,306 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:38:22] 2025-10-12 22:37:33,311 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:37:35,447 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:38:22] 2025-10-12 22:38:00,624 | INFO     | PID=30319 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:38:22] 2025-10-12 22:38:00,624 | INFO     | .. there are 3 such processes running
[2025-10-12 18:38:22] 2025-10-12 22:38:00,625 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:38:22] 2025-10-12 22:38:00,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:38:22] 2025-10-12 22:38:00,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:38:22] 2025-10-12 22:38:16,403 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:38:22] 2025-10-12 22:38:16,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789686925120)>', '<ExcThread(monitor, started 139789021992704)>']
[2025-10-12 18:38:22] 2025-10-12 22:38:17,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:38:22] 2025-10-12 22:38:17,711 | INFO     | [monitor] control thread has ended
[2025-10-12 18:38:22] 2025-10-12 22:38:21,899 | INFO     | all workflow threads have been joined
[2025-10-12 18:38:22] 2025-10-12 22:38:21,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:38:22] 2025-10-12 22:38:21,900 | INFO     | traces error code: 0
[2025-10-12 18:38:22] 2025-10-12 22:38:21,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:38:22] 2025-10-12 22:38:22,038 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:38:22] 2025-10-12 22:38:22,041 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:38:22] 2025-10-12 22:38:22,043 [wrapper] pilotpid: 30319
[2025-10-12 18:38:22] 2025-10-12 22:38:22,046 [wrapper] Pilot exit status: 0
[2025-10-12 18:38:22] 2025-10-12 22:38:22,055 [wrapper] pandaids: 6840225013
[2025-10-12 18:38:22] 2025-10-12 22:38:22,095 [wrapper] cleanup supervisor_pilot 18296 30320
[2025-10-12 18:38:22] 2025-10-12 22:38:22,098 [wrapper] Test setup, not cleaning
[2025-10-12 18:38:22] 2025-10-12 22:38:22,100 [wrapper] apfmon messages muted
[2025-10-12 18:38:22] 2025-10-12 22:38:22,103 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:38:22] 2025-10-12 22:38:22,105 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:38:22]  *** Error codes and diagnostics ***
[2025-10-12 18:38:22]     "exeErrorCode": 0,
[2025-10-12 18:38:22]     "exeErrorDiag": "",
[2025-10-12 18:38:22]     "pilotErrorCode": 0,
[2025-10-12 18:38:22]     "pilotErrorDiag": "",
[2025-10-12 18:38:22]  *** Listing of results directory ***
[2025-10-12 18:38:22] total 416316
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 11:38 queuedata.json
[2025-10-12 18:38:22] -rwx------ 1 boincer umatlas     36292 Oct 12 11:38 runpilot2-wrapper.sh
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:38:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:33 run_atlas
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:33 job.xml
[2025-10-12 18:38:22] -rw-r--r-- 2 boincer umatlas 221681259 Oct 12 15:33 EVNT.46676267._004574.pool.root.1
[2025-10-12 18:38:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:33 start_atlas.sh
[2025-10-12 18:38:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:33 shared
[2025-10-12 18:38:22] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 15:33 input.tar.gz
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:33 boinc_lockfile
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:33 pandaJob.out
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas    975536 Oct 12 15:33 agis_schedconf.cvmfs.json
[2025-10-12 18:38:22] drwx------ 5 boincer umatlas      4096 Oct 12 15:33 pilot3
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 18:36 init_data.xml
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas 196784693 Oct 12 18:36 HITS.46676269._082307.pool.root.1
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas       531 Oct 12 18:36 boinc_task_state.xml
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas      1067 Oct 12 18:37 memory_monitor_summary.json
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas   1560580 Oct 12 18:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas    424393 Oct 12 18:37 log.46676269._082307.job.log.tgz.1
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas      7860 Oct 12 18:37 heartbeat.json
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas        95 Oct 12 18:38 pilot_heartbeat.json
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:38 boinc_mmap_file
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas        28 Oct 12 18:38 wrapper_checkpoint.txt
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas      4821 Oct 12 18:38 pilotlog.txt
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas   1541802 Oct 12 18:38 log.46676269._082307.job.log.1
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas       357 Oct 12 18:38 output.list
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:38 runtime_log
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas   1986560 Oct 12 18:38 result.tar.gz
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 18:38 runtime_log.err
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas       661 Oct 12 18:38 IC6KDmSKDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhRkNDmMcXrPn.diag
[2025-10-12 18:38:22] -rw-r--r-- 1 boincer umatlas     21181 Oct 12 18:38 stderr.txt
[2025-10-12 18:38:22] HITS file was successfully produced:
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas 196784693 Oct 12 18:36 shared/HITS.pool.root.1
[2025-10-12 18:38:22]  *** Contents of shared directory: ***
[2025-10-12 18:38:22] total 411188
[2025-10-12 18:38:22] -rw-r--r-- 2 boincer umatlas 221681259 Oct 12 15:33 ATLAS.root_0
[2025-10-12 18:38:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:33 start_atlas.sh
[2025-10-12 18:38:22] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 15:33 input.tar.gz
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas 196784693 Oct 12 18:36 HITS.pool.root.1
[2025-10-12 18:38:22] -rw------- 1 boincer umatlas   1986560 Oct 12 18:38 result.tar.gz
18:38:23 (26641): run_atlas exited; CPU time 83060.439311
18:38:23 (26641): called boinc_finish(0)

</stderr_txt>
]]>

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