Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:41:00 (2847508): wrapper (7.7.26015): starting
15:41:00 (2847508): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:41:00] Arguments: --nthreads 8
[2025-10-12 15:41:00] Threads: 8
[2025-10-12 15:41:00] Checking for CVMFS
[2025-10-12 15:41:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:41:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:41:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:41:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:41:03] 2.13.2.0 2754702 129677 397380 151635 3 397 29169063 32935936 61106 16776704 0 847452271 99.693 689209097 33221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:41:03] CVMFS is ok
[2025-10-12 15:41:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:41:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:41:03] Further information can be found at the LHC@home message board.
[2025-10-12 15:41:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:41:03] Checking for apptainer binary...
[2025-10-12 15:41:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:41:03] Running /usr/bin/apptainer --version
[2025-10-12 15:41:03] apptainer version 1.4.3-1.el9
[2025-10-12 15:41:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:41:03] c7-9-14.aglt2.org
[2025-10-12 15:41:03] apptainer works
[2025-10-12 15:41:03] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:41:03] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:41:03] Starting ATLAS job with PandaID=6840181395
[2025-10-12 15:41:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:22:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:22:40] 2025-10-12 21:21:31,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:33,377 | INFO     | time since job start (5951s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:34,118 | INFO     | monitor loop #390: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:34,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:35,384 | INFO     | time since job start (5953s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:36,628 | INFO     | monitor loop #391: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:36,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:37,392 | INFO     | time since job start (5955s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:39,139 | INFO     | monitor loop #392: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:39,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:39,400 | INFO     | time since job start (5957s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:41,656 | INFO     | monitor loop #393: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:41,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:42,324 | INFO     | PID=2888470 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:22:40] 2025-10-12 21:21:42,324 | INFO     | .. there are 71 such processes running
[2025-10-12 17:22:40] 2025-10-12 21:21:43,324 | INFO     | time since job start (5961s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:44,165 | INFO     | monitor loop #394: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:44,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:45,345 | INFO     | time since job start (5963s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:46,670 | INFO     | monitor loop #395: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:46,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:47,385 | INFO     | time since job start (5965s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:49,188 | INFO     | monitor loop #396: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:49,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:49,392 | INFO     | time since job start (5967s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:51,400 | INFO     | time since job start (5969s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:51,694 | INFO     | monitor loop #397: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:51,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:53,414 | INFO     | time since job start (5971s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:53,414 | INFO     | 5977s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 17:22:40] 2025-10-12 21:21:54,200 | INFO     | monitor loop #398: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:54,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:55,421 | INFO     | time since job start (5973s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:56,709 | INFO     | monitor loop #399: job 0:6840181395 is in state 'finished'
[2025-10-12 17:22:40] 2025-10-12 21:21:56,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:22:40] 2025-10-12 21:21:57,431 | INFO     | time since job start (5975s) is within the limit (172800.0s)
[2025-10-12 17:22:40] 2025-10-12 21:21:57,920 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 17:22:40] 2025-10-12 21:21:57,929 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.976031250006
[2025-10-12 17:22:40] 2025-10-12 21:21:57,955 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840181395/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:22:40] 2025-10-12 21:21:57,955 | INFO     | extracted standard info from prmon json
[2025-10-12 17:22:40] 2025-10-12 21:21:57,955 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:22:40] 2025-10-12 21:21:57,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:22:40] 2025-10-12 21:21:57,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:22:40] 2025-10-12 21:21:57,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:22:40] 2025-10-12 21:21:57,960 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:22:40] 2025-10-12 21:21:57,960 | INFO     | sum of square deviations: 211283199.98863629
[2025-10-12 17:22:40] 2025-10-12 21:21:57,960 | INFO     | sum of deviations: -5105168164.693182
[2025-10-12 17:22:40] 2025-10-12 21:21:57,960 | INFO     | mean x: 1760301262.5113637
[2025-10-12 17:22:40] 2025-10-12 21:21:57,960 | INFO     | mean y: 2182832.1931818184
[2025-10-12 17:22:40] 2025-10-12 21:21:57,960 | INFO     | -- intersect: 42535777392.12776
[2025-10-12 17:22:40] 2025-10-12 21:21:57,960 | INFO     | intersect: 42535777392.12776
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | chi2: 0.08820409494649914
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | -- intersect: 42535777392.12776
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | current memory leak: -24.16 B/s (using 88 data points, chi2=0.09)
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | ..............................
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . Timing measurements:
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . get job = 0 s
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . initial setup = 6 s
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . payload setup = 43 s
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . stage-in = 0 s
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . payload execution = 5805 s
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . stage-out = 2 s
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | . log creation = 0 s
[2025-10-12 17:22:40] 2025-10-12 21:21:57,961 | INFO     | ..............................
[2025-10-12 17:22:40] 2025-10-12 21:21:58,117 | INFO     | 
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | job summary report
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | --------------------------------------------------
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | PanDA job id: 6840181395
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | task id: 46676269
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | errors: (none)
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | pilot state: finished 
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | transexitcode: 0
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | exeerrorcode: 0
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | exeerrordiag: 
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | exitcode: 0
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | exitmsg: OK
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | cpuconsumptiontime: 23169 s
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | nevents: 400
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | neventsw: 0
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | pid: 2963175
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | pgrp: 2963175
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | corecount: 8
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | event service: False
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2349231, 44: 2349231, 5854: 2376061, 5857: 2385059, 5860: 2385115, 5896: 2385309}
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | --------------------------------------------------
[2025-10-12 17:22:40] 2025-10-12 21:21:58,118 | INFO     | 
[2025-10-12 17:22:40] 2025-10-12 21:21:58,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 17:22:40] 2025-10-12 21:21:58,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:22:40] 2025-10-12 21:21:58,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:22:40] 2025-10-12 21:21:58,266 | INFO     | job 6840181395 has completed (purged errors)
[2025-10-12 17:22:40] 2025-10-12 21:21:58,267 | INFO     | overall cleanup function is called
[2025-10-12 17:22:40] 2025-10-12 21:21:59,300 | INFO     | --- collectZombieJob: --- 10, [2963175]
[2025-10-12 17:22:40] 2025-10-12 21:21:59,301 | INFO     | zombie collector waiting for pid 2963175
[2025-10-12 17:22:40] 2025-10-12 21:21:59,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:22:40] 2025-10-12 21:21:59,301 | INFO     | collected zombie processes
[2025-10-12 17:22:40] 2025-10-12 21:21:59,301 | INFO     | will attempt to kill all subprocesses of pid=2963175
[2025-10-12 17:22:40] 2025-10-12 21:22:00,627 | INFO     | process IDs to be killed: [2963175] (in reverse order)
[2025-10-12 17:22:40] 2025-10-12 21:22:01,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:22:40] 2025-10-12 21:22:01,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:22:40] 2025-10-12 21:22:01,344 | INFO     | did not find any defunct processes belonging to 2963175
[2025-10-12 17:22:40] 2025-10-12 21:22:01,432 | INFO     | did not find any defunct processes belonging to 2963175
[2025-10-12 17:22:40] 2025-10-12 21:22:01,432 | INFO     | ready for new job
[2025-10-12 17:22:40] 2025-10-12 21:22:01,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:22:40] 2025-10-12 21:22:01,442 | INFO     | ***************************************
[2025-10-12 17:22:40] 2025-10-12 21:22:01,442 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:22:40] 2025-10-12 21:22:01,442 | INFO     | ***************************************
[2025-10-12 17:22:40] 2025-10-12 21:22:01,442 | INFO     | 
[2025-10-12 17:22:40] 2025-10-12 21:22:01,484 | INFO     | architecture information:
[2025-10-12 17:22:40] 2025-10-12 21:22:01,487 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:22:40] 2025-10-12 21:22:01,531 | INFO     | cat /etc/os-release:
[2025-10-12 17:22:40] NAME="CentOS Linux"
[2025-10-12 17:22:40] VERSION="7 (Core)"
[2025-10-12 17:22:40] ID="centos"
[2025-10-12 17:22:40] ID_LIKE="rhel fedora"
[2025-10-12 17:22:40] VERSION_ID="7"
[2025-10-12 17:22:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:22:40] ANSI_COLOR="0;31"
[2025-10-12 17:22:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:22:40] HOME_URL="https://www.centos.org/"
[2025-10-12 17:22:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:22:40] 
[2025-10-12 17:22:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:22:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:22:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:22:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:22:40] 
[2025-10-12 17:22:40] 2025-10-12 21:22:01,531 | INFO     | ***************************************
[2025-10-12 17:22:40] 2025-10-12 21:22:02,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 17:22:40] 2025-10-12 21:22:02,142 | INFO     | sufficient remaining disk space (71975305216 B)
[2025-10-12 17:22:40] 2025-10-12 21:22:02,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:22:40] 2025-10-12 21:22:02,142 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:22:40] 2025-10-12 21:22:02,142 | INFO     | update_server=False
[2025-10-12 17:22:40] 2025-10-12 21:22:02,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:22:40] 2025-10-12 21:22:02,372 | INFO     | all data control threads have been joined
[2025-10-12 17:22:40] 2025-10-12 21:22:02,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:22:40] 2025-10-12 21:22:02,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:22:40] 2025-10-12 21:22:02,738 | INFO     | aborting loop
[2025-10-12 17:22:40] 2025-10-12 21:22:02,984 | INFO     | all payload control threads have been joined
[2025-10-12 17:22:40] 2025-10-12 21:22:03,104 | INFO     | all job control threads have been joined
[2025-10-12 17:22:40] 2025-10-12 21:22:03,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:22:40] 2025-10-12 21:22:03,148 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:03,378 | INFO     | [data] control thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:03,418 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:03,688 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:03,689 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:03,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:22:40] 2025-10-12 21:22:03,759 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:03,990 | INFO     | [payload] control thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,026 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,056 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,057 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,106 | INFO     | [job] validate thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,110 | INFO     | [job] control thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,138 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:04,723 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:07,749 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:22:40] 2025-10-12 21:22:31,663 | INFO     | PID=2888470 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:22:40] 2025-10-12 21:22:31,663 | INFO     | .. there are 71 such processes running
[2025-10-12 17:22:40] 2025-10-12 21:22:31,667 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:22:40] 2025-10-12 21:22:31,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:22:40] 2025-10-12 21:22:31,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:22:40] 2025-10-12 21:22:32,539 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:22:40] 2025-10-12 21:22:33,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014912886592)>', '<ExcThread(monitor, started 140014558099200)>']
[2025-10-12 17:22:40] 2025-10-12 21:22:34,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:22:40] 2025-10-12 21:22:34,694 | INFO     | [monitor] control thread has ended
[2025-10-12 17:22:40] 2025-10-12 21:22:38,773 | INFO     | all workflow threads have been joined
[2025-10-12 17:22:40] 2025-10-12 21:22:38,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:22:40] 2025-10-12 21:22:38,774 | INFO     | traces error code: 0
[2025-10-12 17:22:40] 2025-10-12 21:22:38,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:22:40] 2025-10-12 21:22:38,935 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:22:40] 2025-10-12 21:22:38,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:22:40] 2025-10-12 21:22:39,045 [wrapper] pilotpid: 2888470
[2025-10-12 17:22:40] 2025-10-12 21:22:39,133 [wrapper] Pilot exit status: 0
[2025-10-12 17:22:40] 2025-10-12 21:22:39,368 [wrapper] pandaids: 6840181395
[2025-10-12 17:22:40] 2025-10-12 21:22:39,890 [wrapper] cleanup supervisor_pilot  484271 2888471
[2025-10-12 17:22:40] 2025-10-12 21:22:39,926 [wrapper] Test setup, not cleaning
[2025-10-12 17:22:40] 2025-10-12 21:22:39,978 [wrapper] apfmon messages muted
[2025-10-12 17:22:40] 2025-10-12 21:22:40,024 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:22:40] 2025-10-12 21:22:40,068 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:22:40]  *** Error codes and diagnostics ***
[2025-10-12 17:22:40]     "exeErrorCode": 0,
[2025-10-12 17:22:40]     "exeErrorDiag": "",
[2025-10-12 17:22:40]     "pilotErrorCode": 0,
[2025-10-12 17:22:40]     "pilotErrorDiag": "",
[2025-10-12 17:22:40]  *** Listing of results directory ***
[2025-10-12 17:22:40] total 410604
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 17:22:40] -rwx------. 1 boincer umatlas     36292 Oct 12 10:11 runpilot2-wrapper.sh
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:11 queuedata.json
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:22:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:40 run_atlas
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:40 job.xml
[2025-10-12 17:22:40] -rw-r--r--. 2 boincer umatlas 219509023 Oct 12 15:41 EVNT.46676267._004216.pool.root.1
[2025-10-12 17:22:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:41 start_atlas.sh
[2025-10-12 17:22:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:41 shared
[2025-10-12 17:22:40] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 15:41 input.tar.gz
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:41 boinc_lockfile
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:41 pandaJob.out
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas    975536 Oct 12 15:42 agis_schedconf.cvmfs.json
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:22:40] drwx------. 5 boincer umatlas      4096 Oct 12 15:42 pilot3
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas 194760271 Oct 12 17:20 HITS.46676269._080354.pool.root.1
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas       529 Oct 12 17:20 boinc_task_state.xml
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas      1036 Oct 12 17:21 memory_monitor_summary.json
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas    350463 Oct 12 17:21 log.46676269._080354.job.log.tgz.1
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas      7159 Oct 12 17:21 init_data.xml
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas      7779 Oct 12 17:21 heartbeat.json
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas        95 Oct 12 17:22 pilot_heartbeat.json
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas        27 Oct 12 17:22 wrapper_checkpoint.txt
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas      4824 Oct 12 17:22 pilotlog.txt
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas    790532 Oct 12 17:22 log.46676269._080354.job.log.1
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas       357 Oct 12 17:22 output.list
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:22 runtime_log
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas   1157120 Oct 12 17:22 result.tar.gz
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 17:22 runtime_log.err
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas       651 Oct 12 17:22 KXJODmgyBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlBkNDm72YNGm.diag
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:22 boinc_mmap_file
[2025-10-12 17:22:40] -rw-r--r--. 1 boincer umatlas     22384 Oct 12 17:22 stderr.txt
[2025-10-12 17:22:40] HITS file was successfully produced:
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas 194760271 Oct 12 17:20 shared/HITS.pool.root.1
[2025-10-12 17:22:40]  *** Contents of shared directory: ***
[2025-10-12 17:22:40] total 406280
[2025-10-12 17:22:40] -rw-r--r--. 2 boincer umatlas 219509023 Oct 12 15:41 ATLAS.root_0
[2025-10-12 17:22:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:41 start_atlas.sh
[2025-10-12 17:22:40] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 15:41 input.tar.gz
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas 194760271 Oct 12 17:20 HITS.pool.root.1
[2025-10-12 17:22:40] -rw-------. 1 boincer umatlas   1157120 Oct 12 17:22 result.tar.gz
17:22:42 (2847508): run_atlas exited; CPU time 23361.554574
17:22:42 (2847508): called boinc_finish(0)

</stderr_txt>
]]>

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