Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:30:49 (1245531): wrapper (7.7.26015): starting
16:30:49 (1245531): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:30:49] Arguments: --nthreads 8
[2025-10-12 16:30:49] Threads: 8
[2025-10-12 16:30:49] Checking for CVMFS
[2025-10-12 16:30:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:30:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:30:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:30:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:30:51] 2.13.2.0 136315 23242 227292 151636 3 113 27263558 40960001 16682 16776704 0 59178458 99.705 51013775 32187 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:30:51] CVMFS is ok
[2025-10-12 16:30:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:30:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:30:51] Further information can be found at the LHC@home message board.
[2025-10-12 16:30:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:30:51] Checking for apptainer binary...
[2025-10-12 16:30:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:30:51] Running /usr/bin/apptainer --version
[2025-10-12 16:30:51] apptainer version 1.4.3-1.el9
[2025-10-12 16:30:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:30:52] c6-8-12-2.aglt2.org
[2025-10-12 16:30:52] apptainer works
[2025-10-12 16:30:52] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:30:52] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:30:52] Starting ATLAS job with PandaID=6840390487
[2025-10-12 16:30:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:51:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:51:03] 2025-10-13 02:49:51,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:51:03] 2025-10-13 02:49:51,831 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:51:03] 2025-10-13 02:49:51,832 | INFO     | sum of square deviations: 15578163096.346886
[2025-10-12 22:51:03] 2025-10-13 02:49:51,862 | INFO     | sum of deviations: 1831931634.2249413
[2025-10-12 22:51:03] 2025-10-13 02:49:51,862 | INFO     | mean x: 1760312497.5718157
[2025-10-12 22:51:03] 2025-10-13 02:49:51,862 | INFO     | mean y: 2511759.425474255
[2025-10-12 22:51:03] 2025-10-13 02:49:51,863 | INFO     | -- intersect: -204494171.27886793
[2025-10-12 22:51:03] 2025-10-13 02:49:51,863 | INFO     | intersect: -204494171.27886793
[2025-10-12 22:51:03] 2025-10-13 02:49:51,863 | INFO     | chi2: 4.209526083705143
[2025-10-12 22:51:03] 2025-10-13 02:49:51,889 | INFO     | sum of square deviations: 14953452944.689606
[2025-10-12 22:51:03] 2025-10-13 02:49:51,891 | INFO     | sum of deviations: 48254619474.31593
[2025-10-12 22:51:03] 2025-10-13 02:49:51,892 | INFO     | mean x: 1760312345.0796704
[2025-10-12 22:51:03] 2025-10-13 02:49:51,892 | INFO     | mean y: 2522997.2994505493
[2025-10-12 22:51:03] 2025-10-13 02:49:51,892 | INFO     | -- intersect: -5677984553.829464
[2025-10-12 22:51:03] 2025-10-13 02:49:51,892 | INFO     | intersect: -5677984553.829464
[2025-10-12 22:51:03] 2025-10-13 02:49:51,892 | INFO     | chi2: 2.8441757385183104
[2025-10-12 22:51:03] 2025-10-13 02:49:51,892 | INFO     | current chi2=2.8441757385183104 (change=32.43477574523253 %)
[2025-10-12 22:51:03] 2025-10-13 02:49:51,913 | INFO     | sum of square deviations: 14345651383.158768
[2025-10-12 22:51:03] 2025-10-13 02:49:51,924 | INFO     | sum of deviations: 47228458309.852325
[2025-10-12 22:51:03] 2025-10-13 02:49:51,924 | INFO     | mean x: 1760312192.5849583
[2025-10-12 22:51:03] 2025-10-13 02:49:51,924 | INFO     | mean y: 2522739.824512535
[2025-10-12 22:51:03] 2025-10-13 02:49:51,924 | INFO     | -- intersect: -5792740840.707134
[2025-10-12 22:51:03] 2025-10-13 02:49:51,924 | INFO     | intersect: -5792740840.707134
[2025-10-12 22:51:03] 2025-10-13 02:49:51,925 | INFO     | chi2: 2.8449787907702238
[2025-10-12 22:51:03] 2025-10-13 02:49:51,925 | INFO     | current chi2=2.8449787907702238 (change=-0.028234973002466593 %)
[2025-10-12 22:51:03] 2025-10-13 02:49:51,925 | INFO     | right removable region: 358
[2025-10-12 22:51:03] 2025-10-13 02:49:51,947 | INFO     | sum of square deviations: 14953324234.689602
[2025-10-12 22:51:03] 2025-10-13 02:49:51,950 | INFO     | sum of deviations: -87170994676.03297
[2025-10-12 22:51:03] 2025-10-13 02:49:51,950 | INFO     | mean x: 1760312650.0796704
[2025-10-12 22:51:03] 2025-10-13 02:49:51,950 | INFO     | mean y: 2533409.7252747254
[2025-10-12 22:51:03] 2025-10-13 02:49:51,950 | INFO     | -- intersect: 10264345582.049492
[2025-10-12 22:51:03] 2025-10-13 02:49:51,950 | INFO     | intersect: 10264345582.049492
[2025-10-12 22:51:03] 2025-10-13 02:49:51,972 | INFO     | chi2: 1.7483229623737708
[2025-10-12 22:51:03] 2025-10-13 02:49:51,972 | INFO     | current chi2=1.7483229623737708 (change=58.467463376900355 %)
[2025-10-12 22:51:03] 2025-10-13 02:49:51,973 | INFO     | sum of square deviations: 14345482657.48744
[2025-10-12 22:51:03] 2025-10-13 02:49:51,975 | INFO     | sum of deviations: -94304870010.81624
[2025-10-12 22:51:03] 2025-10-13 02:49:51,975 | INFO     | mean x: 1760312802.5793872
[2025-10-12 22:51:03] 2025-10-13 02:49:51,975 | INFO     | mean y: 2535185.8356545963
[2025-10-12 22:51:03] 2025-10-13 02:49:51,975 | INFO     | -- intersect: 11574545273.55341
[2025-10-12 22:51:03] 2025-10-13 02:49:51,975 | INFO     | intersect: 11574545273.55341
[2025-10-12 22:51:03] 2025-10-13 02:49:52,011 | INFO     | chi2: 1.7113145903980307
[2025-10-12 22:51:03] 2025-10-13 02:49:52,011 | INFO     | current chi2=1.7113145903980307 (change=2.116792650569111 %)
[2025-10-12 22:51:03] 2025-10-13 02:49:52,011 | INFO     | left removable region: 20
[2025-10-12 22:51:03] 2025-10-13 02:49:52,012 | INFO     | sum of square deviations: 11972247850.57982
[2025-10-12 22:51:03] 2025-10-13 02:49:52,052 | INFO     | sum of deviations: -27827639903.5266
[2025-10-12 22:51:03] 2025-10-13 02:49:52,052 | INFO     | mean x: 1760312772.1005917
[2025-10-12 22:51:03] 2025-10-13 02:49:52,052 | INFO     | mean y: 2541628.6331360945
[2025-10-12 22:51:03] 2025-10-13 02:49:52,052 | INFO     | -- intersect: 4094116623.6514335
[2025-10-12 22:51:03] 2025-10-13 02:49:52,052 | INFO     | intersect: 4094116623.6514335
[2025-10-12 22:51:03] 2025-10-13 02:49:52,053 | INFO     | chi2: 0.24451493720386885
[2025-10-12 22:51:03] 2025-10-13 02:49:52,053 | INFO     | -- intersect: 4094116623.6514335
[2025-10-12 22:51:03] 2025-10-13 02:49:52,053 | INFO     | current memory leak: -2.32 B/s (using 338 data points, chi2=0.24)
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | could have reported an average CPU frequency of 2757 MHz (16 samples)
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | ..............................
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . Timing measurements:
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . get job = 0 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . initial setup = 5 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . payload setup = 40 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . stage-in = 0 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . payload execution = 22495 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . stage-out = 4 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | . log creation = 0 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,054 | INFO     | ..............................
[2025-10-12 22:51:03] 2025-10-13 02:49:52,779 | INFO     | 
[2025-10-12 22:51:03] 2025-10-13 02:49:52,779 | INFO     | job summary report
[2025-10-12 22:51:03] 2025-10-13 02:49:52,795 | INFO     | --------------------------------------------------
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | PanDA job id: 6840390487
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | task id: 46676269
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | errors: (none)
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | pilot state: finished 
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | transexitcode: 0
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | exeerrorcode: 0
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | exeerrordiag: 
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | exitcode: 0
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | exitmsg: OK
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | cpuconsumptiontime: 43601 s
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | nevents: 400
[2025-10-12 22:51:03] 2025-10-13 02:49:52,796 | INFO     | neventsw: 0
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | pid: 1271044
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | pgrp: 1271044
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | corecount: 8
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | event service: False
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348691, 3: 2348890, 14: 2348890, 24: 2348918, 34: 2349336, 35: 2349364, 22541: 2383312, 22542: 2383311, 22547: 2392365, 22550: 
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | --------------------------------------------------
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | 
[2025-10-12 22:51:03] 2025-10-13 02:49:52,797 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 22:51:03] 2025-10-13 02:49:52,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:51:03] 2025-10-13 02:49:52,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,939 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:51:03] 2025-10-13 02:49:52,939 | INFO     | job 6840390487 has completed (purged errors)
[2025-10-12 22:51:03] 2025-10-13 02:49:52,939 | INFO     | overall cleanup function is called
[2025-10-12 22:51:03] 2025-10-13 02:49:53,971 | INFO     | --- collectZombieJob: --- 10, [1271044]
[2025-10-12 22:51:03] 2025-10-13 02:49:53,971 | INFO     | zombie collector waiting for pid 1271044
[2025-10-12 22:51:03] 2025-10-13 02:49:53,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:51:03] 2025-10-13 02:49:53,971 | INFO     | collected zombie processes
[2025-10-12 22:51:03] 2025-10-13 02:49:53,971 | INFO     | will attempt to kill all subprocesses of pid=1271044
[2025-10-12 22:51:03] 2025-10-13 02:49:56,037 | INFO     | process IDs to be killed: [1271044] (in reverse order)
[2025-10-12 22:51:03] 2025-10-13 02:49:56,331 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:51:03] 2025-10-13 02:49:56,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:51:03] 2025-10-13 02:49:56,471 | INFO     | did not find any defunct processes belonging to 1271044
[2025-10-12 22:51:03] 2025-10-13 02:49:56,514 | INFO     | did not find any defunct processes belonging to 1271044
[2025-10-12 22:51:03] 2025-10-13 02:49:56,515 | INFO     | ready for new job
[2025-10-12 22:51:03] 2025-10-13 02:49:56,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:51:03] 2025-10-13 02:49:56,518 | INFO     | ***************************************
[2025-10-12 22:51:03] 2025-10-13 02:49:56,518 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:51:03] 2025-10-13 02:49:56,518 | INFO     | ***************************************
[2025-10-12 22:51:03] 2025-10-13 02:49:56,518 | INFO     | 
[2025-10-12 22:51:03] 2025-10-13 02:49:56,521 | INFO     | architecture information:
[2025-10-12 22:51:03] 2025-10-13 02:49:56,522 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:51:03] 2025-10-13 02:49:56,585 | INFO     | cat /etc/os-release:
[2025-10-12 22:51:03] NAME="CentOS Linux"
[2025-10-12 22:51:03] VERSION="7 (Core)"
[2025-10-12 22:51:03] ID="centos"
[2025-10-12 22:51:03] ID_LIKE="rhel fedora"
[2025-10-12 22:51:03] VERSION_ID="7"
[2025-10-12 22:51:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:51:03] ANSI_COLOR="0;31"
[2025-10-12 22:51:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:51:03] HOME_URL="https://www.centos.org/"
[2025-10-12 22:51:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:51:03] 
[2025-10-12 22:51:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:51:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:51:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:51:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:51:03] 
[2025-10-12 22:51:03] 2025-10-13 02:49:56,586 | INFO     | ***************************************
[2025-10-12 22:51:03] 2025-10-13 02:49:57,089 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 22:51:03] 2025-10-13 02:49:57,268 | INFO     | sufficient remaining disk space (74682728448 B)
[2025-10-12 22:51:03] 2025-10-13 02:49:57,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:51:03] 2025-10-13 02:49:57,269 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:51:03] 2025-10-13 02:49:57,269 | INFO     | update_server=False
[2025-10-12 22:51:03] 2025-10-13 02:49:57,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:51:03] 2025-10-13 02:49:57,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:51:03] 2025-10-13 02:49:57,332 | INFO     | all payload control threads have been joined
[2025-10-12 22:51:03] 2025-10-13 02:49:57,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:51:03] 2025-10-13 02:49:57,622 | INFO     | all data control threads have been joined
[2025-10-12 22:51:03] 2025-10-13 02:49:57,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:51:03] 2025-10-13 02:49:57,733 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:51:03] 2025-10-13 02:49:57,733 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:51:03] 2025-10-13 02:49:57,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:51:03] 2025-10-13 02:49:57,733 | INFO     | will abort loop
[2025-10-12 22:51:03] 2025-10-13 02:49:58,275 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,295 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,338 | INFO     | [payload] control thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,362 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,366 | INFO     | [job] validate thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,443 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,629 | INFO     | [data] control thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,740 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:58,961 | INFO     | all job control threads have been joined
[2025-10-12 22:51:03] 2025-10-13 02:49:59,137 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:59,295 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:59,576 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:59,659 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:59,776 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:49:59,967 | INFO     | [job] control thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:50:01,697 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:51:03] 2025-10-13 02:50:28,109 | INFO     | PID=1257089 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:51:03] 2025-10-13 02:50:28,128 | INFO     | .. there are 29 such processes running
[2025-10-12 22:51:03] 2025-10-13 02:50:28,129 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:51:03] 2025-10-13 02:50:28,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:51:03] 2025-10-13 02:50:28,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:51:03] 2025-10-13 02:50:54,767 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:51:03] 2025-10-13 02:50:56,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774419375936)>', '<ExcThread(monitor, started 139773335303936)>']
[2025-10-12 22:51:03] 2025-10-13 02:50:56,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:51:03] 2025-10-13 02:50:56,350 | INFO     | [monitor] control thread has ended
[2025-10-12 22:51:03] 2025-10-13 02:51:01,303 | INFO     | all workflow threads have been joined
[2025-10-12 22:51:03] 2025-10-13 02:51:01,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:51:03] 2025-10-13 02:51:01,303 | INFO     | traces error code: 0
[2025-10-12 22:51:03] 2025-10-13 02:51:01,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:51:03] 2025-10-13 02:51:02,512 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:51:03] 2025-10-13 02:51:02,527 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:51:03] 2025-10-13 02:51:02,559 [wrapper] pilotpid: 1257089
[2025-10-12 22:51:03] 2025-10-13 02:51:02,590 [wrapper] Pilot exit status: 0
[2025-10-12 22:51:03] 2025-10-13 02:51:02,711 [wrapper] pandaids: 6840390487
[2025-10-12 22:51:03] 2025-10-13 02:51:02,814 [wrapper] cleanup supervisor_pilot 2572525 1257090
[2025-10-12 22:51:03] 2025-10-13 02:51:02,841 [wrapper] Test setup, not cleaning
[2025-10-12 22:51:03] 2025-10-13 02:51:02,887 [wrapper] apfmon messages muted
[2025-10-12 22:51:03] 2025-10-13 02:51:02,922 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:51:03] 2025-10-13 02:51:02,975 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:51:03]  *** Error codes and diagnostics ***
[2025-10-12 22:51:03]     "exeErrorCode": 0,
[2025-10-12 22:51:03]     "exeErrorDiag": "",
[2025-10-12 22:51:03]     "pilotErrorCode": 0,
[2025-10-12 22:51:03]     "pilotErrorDiag": "",
[2025-10-12 22:51:03]  *** Listing of results directory ***
[2025-10-12 22:51:03] total 411764
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:18 queuedata.json
[2025-10-12 22:51:03] -rwx------. 1 boincer umatlas     36292 Oct 12 12:20 runpilot2-wrapper.sh
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:51:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:30 run_atlas
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:30 job.xml
[2025-10-12 22:51:03] -rw-r--r--. 2 boincer umatlas 219255620 Oct 12 16:30 EVNT.46676267._004735.pool.root.1
[2025-10-12 22:51:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:30 shared
[2025-10-12 22:51:03] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 16:30 input.tar.gz
[2025-10-12 22:51:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:30 start_atlas.sh
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:30 boinc_lockfile
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 16:30 pandaJob.out
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas    975536 Oct 12 16:32 agis_schedconf.cvmfs.json
[2025-10-12 22:51:03] drwx------. 5 boincer umatlas      4096 Oct 12 16:32 pilot3
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas 191942695 Oct 12 22:47 HITS.46676269._083319.pool.root.1
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas       531 Oct 12 22:47 boinc_task_state.xml
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 22:48 init_data.xml
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas      1040 Oct 12 22:48 memory_monitor_summary.json
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas    549790 Oct 12 22:49 log.46676269._083319.job.log.tgz.1
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas      7826 Oct 12 22:49 heartbeat.json
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas        95 Oct 12 22:50 pilot_heartbeat.json
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas      5010 Oct 12 22:51 pilotlog.txt
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas        28 Oct 12 22:51 wrapper_checkpoint.txt
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:51 boinc_mmap_file
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas   2722575 Oct 12 22:51 log.46676269._083319.job.log.1
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas       357 Oct 12 22:51 output.list
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:51 runtime_log
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas   3287040 Oct 12 22:51 result.tar.gz
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas       658 Oct 12 22:51 VpoLDmKzDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcbkNDmAYhfLo.diag
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 22:51 runtime_log.err
[2025-10-12 22:51:03] -rw-r--r--. 1 boincer umatlas     21068 Oct 12 22:51 stderr.txt
[2025-10-12 22:51:03] HITS file was successfully produced:
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas 191942695 Oct 12 22:47 shared/HITS.pool.root.1
[2025-10-12 22:51:03]  *** Contents of shared directory: ***
[2025-10-12 22:51:03] total 405360
[2025-10-12 22:51:03] -rw-r--r--. 2 boincer umatlas 219255620 Oct 12 16:30 ATLAS.root_0
[2025-10-12 22:51:03] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 16:30 input.tar.gz
[2025-10-12 22:51:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:30 start_atlas.sh
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas 191942695 Oct 12 22:47 HITS.pool.root.1
[2025-10-12 22:51:03] -rw-------. 1 boincer umatlas   3287040 Oct 12 22:51 result.tar.gz
22:51:05 (1245531): run_atlas exited; CPU time 44331.297354
22:51:05 (1245531): called boinc_finish(0)

</stderr_txt>
]]>

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