Name bZaLDmgbBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm25jNDmFB1kbm_2
Workunit 235927205
Created 12 Oct 2025, 18:03:29 UTC
Sent 12 Oct 2025, 19:24:41 UTC
Report deadline 20 Oct 2025, 19:24:41 UTC
Received 12 Oct 2025, 22:05:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10943326
Run time 47 min 19 sec
CPU time 5 hours 36 min 31 sec
Validate state Valid
Credit 52.59
Device peak FLOPS 8.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.91 GB
Peak swap size 3.00 GB
Peak disk usage 610.29 MB

Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
23:17:31 (2054): wrapper (7.7.26015): starting
23:17:31 (2054): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:17:31] Arguments: --nthreads 8
[2025-10-12 23:17:31] Threads: 8
[2025-10-12 23:17:31] Checking for CVMFS
[2025-10-12 23:17:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:17:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:17:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:17:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:17:32] 2.11.0.0 4320 1520 57020 151638 2 11 1934621 4096000 917 130560 0 703755 99.070 717297 1149 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-12 23:17:32] CVMFS is ok
[2025-10-12 23:17:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:17:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:17:32] Further information can be found at the LHC@home message board.
[2025-10-12 23:17:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:17:32] Checking for apptainer binary...
[2025-10-12 23:17:32] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-12 23:17:32] apptainer is not installed, using version from CVMFS
[2025-10-12 23:17:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:17:32] WARNING: Environment variable TMPDIR already has value [/tmp/job_10530310/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node138
[2025-10-12 23:17:32] apptainer works
[2025-10-12 23:17:32] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:17:32] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:17:32] Starting ATLAS job with PandaID=6840082094
[2025-10-12 23:17:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10530310/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:04:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:04:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/a3/log.46676269._079909.job.log.tgz.1
[2025-10-13 00:04:47]  workdir=None
[2025-10-13 00:04:47] ]
[2025-10-13 00:04:47] 2025-10-12 22:04:02,898 | INFO     | transferring file log.46676269._079909.job.log.tgz.1 from /tmp/job_10530310/atlas/pilot/slots/0/PanDA_Pilot-6840082094/log.46676269._079909.job.log.tgz.1 to /tmp/j
[2025-10-13 00:04:47] 2025-10-12 22:04:02,898 | INFO     | executing command: /usr/bin/env mv /tmp/job_10530310/atlas/pilot/slots/0/PanDA_Pilot-6840082094/log.46676269._079909.job.log.tgz.1 /tmp/job_10530310/atlas/pilot/sl
[2025-10-13 00:04:47] 2025-10-12 22:04:02,906 | INFO     | adding to output.list: log.46676269._079909.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/a3/log.46676269._079909.job.log.tg
[2025-10-13 00:04:47] 2025-10-12 22:04:02,907 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:04:47] 2025-10-12 22:04:02,907 | INFO     | summary of transferred files:
[2025-10-13 00:04:47] 2025-10-12 22:04:02,907 | INFO     |  -- lfn=log.46676269._079909.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:04:47] 2025-10-12 22:04:02,907 | INFO     | stage-out finished correctly
[2025-10-13 00:04:47] 2025-10-12 22:04:02,977 | WARNING  | process 15431 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 00:04:47] 2025-10-12 22:04:02,977 | INFO     | using path: /tmp/job_10530310/atlas/pilot/slots/0/PanDA_Pilot-6840082094/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:04:47] 2025-10-12 22:04:02,977 | INFO     | reaping zombies for max 20 seconds
[2025-10-13 00:04:47] 2025-10-12 22:04:02,983 | INFO     | checking for looping job (in state=finished)
[2025-10-13 00:04:47] 2025-10-12 22:04:02,983 | INFO     | using looping job limit: 7200 s
[2025-10-13 00:04:47] 2025-10-12 22:04:03,075 | INFO     | number of running child processes to parent process 15431: 1
[2025-10-13 00:04:47] 2025-10-12 22:04:03,075 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:04:47] 2025-10-12 22:04:03,868 | INFO     | PID=7047 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 00:04:47] 2025-10-12 22:04:04,869 | INFO     | time since job start (2787s) is within the limit (172800.0s)
[2025-10-13 00:04:47] 2025-10-12 22:04:05,578 | INFO     | monitor loop #208: job 0:6840082094 is in state 'finished'
[2025-10-13 00:04:47] 2025-10-12 22:04:05,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:04:47] 2025-10-12 22:04:05,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:04:47] 2025-10-12 22:04:06,874 | INFO     | time since job start (2789s) is within the limit (172800.0s)
[2025-10-13 00:04:47] 2025-10-12 22:04:06,977 | INFO     | job 6840082094 has state=finished
[2025-10-13 00:04:47] 2025-10-12 22:04:06,977 | INFO     | preparing for final server update for job 6840082094 in state='finished'
[2025-10-13 00:04:47] 2025-10-12 22:04:06,977 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:04:47] 2025-10-12 22:04:06,977 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:04:47] 2025-10-12 22:04:06,977 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:04:47] 2025-10-12 22:04:06,977 | INFO     | job 6840082094 has finished - writing final server update
[2025-10-13 00:04:47] 2025-10-12 22:04:06,977 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:04:47] 2025-10-12 22:04:06,978 | INFO     | executing command: lscpu
[2025-10-13 00:04:47] 2025-10-12 22:04:07,008 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:04:47] 2025-10-12 22:04:08,081 | INFO     | monitor loop #209: job 0:6840082094 is in state 'finished'
[2025-10-13 00:04:47] 2025-10-12 22:04:08,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:04:47] 2025-10-12 22:04:08,776 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:04:47] 2025-10-12 22:04:08,780 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2645.2840625
[2025-10-13 00:04:47] 2025-10-12 22:04:08,785 | INFO     | using path: /tmp/job_10530310/atlas/pilot/slots/0/PanDA_Pilot-6840082094/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:04:47] 2025-10-12 22:04:08,786 | INFO     | extracted standard info from prmon json
[2025-10-13 00:04:47] 2025-10-12 22:04:08,786 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:04:47] 2025-10-12 22:04:08,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:04:47] 2025-10-12 22:04:08,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:04:47] 2025-10-12 22:04:08,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | sum of square deviations: 18381740.0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | sum of deviations: 455905582.0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | mean x: 1760305339.0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | mean y: 2961424.230769231
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | -- intersect: -43656291185.94119
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | intersect: -43656291185.94119
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | chi2: 0.0008639078150701817
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | -- intersect: -43656291185.94119
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | current memory leak: 24.80 B/s (using 39 data points, chi2=0.00)
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | could have reported an average CPU frequency of 2538 MHz (5 samples)
[2025-10-13 00:04:47] 2025-10-12 22:04:08,787 | INFO     | ..............................
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . Timing measurements:
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . get job = 0 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . initial setup = 1 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . payload setup = 2 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . stage-in = 0 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . payload execution = 2766 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . stage-out = 0 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | . log creation = 0 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,788 | INFO     | ..............................
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | 
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | job summary report
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | --------------------------------------------------
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | PanDA job id: 6840082094
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | task id: 46676269
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | errors: (none)
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | pilot state: finished 
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | transexitcode: 0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,838 | INFO     | exeerrorcode: 0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | exeerrordiag: 
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | exitcode: 0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | exitmsg: OK
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | cpuconsumptiontime: 20156 s
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | nevents: 400
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | neventsw: 0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | pid: 15431
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | pgrp: 15431
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | corecount: 8
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | event service: False
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | sizes: {0: 2348982, 2: 2349244, 11: 2349272, 2772: 2374709, 2773: 2383737, 2775: 2383793, 2779: 2384147}
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | --------------------------------------------------
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | 
[2025-10-13 00:04:47] 2025-10-12 22:04:08,839 | INFO     | executing command: ls -lF /tmp/job_10530310/atlas/pilot/slots/0
[2025-10-13 00:04:47] 2025-10-12 22:04:08,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,848 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,848 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,848 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | job 6840082094 has completed (purged errors)
[2025-10-13 00:04:47] 2025-10-12 22:04:08,849 | INFO     | overall cleanup function is called
[2025-10-13 00:04:47] 2025-10-12 22:04:09,855 | INFO     | --- collectZombieJob: --- 10, [15431]
[2025-10-13 00:04:47] 2025-10-12 22:04:09,855 | INFO     | zombie collector waiting for pid 15431
[2025-10-13 00:04:47] 2025-10-12 22:04:09,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:04:47] 2025-10-12 22:04:09,855 | INFO     | collected zombie processes
[2025-10-13 00:04:47] 2025-10-12 22:04:09,855 | INFO     | will attempt to kill all subprocesses of pid=15431
[2025-10-13 00:04:47] 2025-10-12 22:04:09,946 | INFO     | process IDs to be killed: [15431] (in reverse order)
[2025-10-13 00:04:47] 2025-10-12 22:04:09,976 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:04:47] 2025-10-12 22:04:09,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:04:47] 2025-10-12 22:04:09,980 | INFO     | did not find any defunct processes belonging to 15431
[2025-10-13 00:04:47] 2025-10-12 22:04:09,982 | INFO     | did not find any defunct processes belonging to 15431
[2025-10-13 00:04:47] 2025-10-12 22:04:09,983 | INFO     | ready for new job
[2025-10-13 00:04:47] 2025-10-12 22:04:09,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:04:47] 2025-10-12 22:04:09,983 | INFO     | ***************************************
[2025-10-13 00:04:47] 2025-10-12 22:04:09,983 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:04:47] 2025-10-12 22:04:09,983 | INFO     | ***************************************
[2025-10-13 00:04:47] 2025-10-12 22:04:09,983 | INFO     | 
[2025-10-13 00:04:47] 2025-10-12 22:04:09,997 | INFO     | architecture information:
[2025-10-13 00:04:47] 2025-10-12 22:04:09,997 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:04:47] 2025-10-12 22:04:10,003 | INFO     | cat /etc/os-release:
[2025-10-13 00:04:47] NAME="CentOS Linux"
[2025-10-13 00:04:47] VERSION="7 (Core)"
[2025-10-13 00:04:47] ID="centos"
[2025-10-13 00:04:47] ID_LIKE="rhel fedora"
[2025-10-13 00:04:47] VERSION_ID="7"
[2025-10-13 00:04:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:04:47] ANSI_COLOR="0;31"
[2025-10-13 00:04:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:04:47] HOME_URL="https://www.centos.org/"
[2025-10-13 00:04:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:04:47] 
[2025-10-13 00:04:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:04:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:04:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:04:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:04:47] 
[2025-10-13 00:04:47] 2025-10-12 22:04:10,004 | INFO     | ***************************************
[2025-10-13 00:04:47] 2025-10-12 22:04:10,506 | INFO     | executing command: df -mP /tmp/job_10530310/atlas/pilot/slots/0
[2025-10-13 00:04:47] 2025-10-12 22:04:10,512 | INFO     | sufficient remaining disk space (228542382080 B)
[2025-10-13 00:04:47] 2025-10-12 22:04:10,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:04:47] 2025-10-12 22:04:10,512 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:04:47] 2025-10-12 22:04:10,512 | INFO     | update_server=False
[2025-10-13 00:04:47] 2025-10-12 22:04:10,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:04:47] 2025-10-12 22:04:10,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:04:47] 2025-10-12 22:04:10,584 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 00:04:47] 2025-10-12 22:04:10,584 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 00:04:47] 2025-10-12 22:04:10,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:04:47] 2025-10-12 22:04:10,584 | INFO     | will abort loop
[2025-10-13 00:04:47] 2025-10-12 22:04:10,825 | INFO     | all payload control threads have been joined
[2025-10-13 00:04:47] 2025-10-12 22:04:10,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:04:47] 2025-10-12 22:04:11,121 | INFO     | all job control threads have been joined
[2025-10-13 00:04:47] 2025-10-12 22:04:11,518 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:11,518 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:11,589 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:11,594 | INFO     | all data control threads have been joined
[2025-10-13 00:04:47] 2025-10-12 22:04:11,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:04:47] 2025-10-12 22:04:11,831 | INFO     | [payload] control thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:11,967 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,127 | INFO     | [job] control thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,254 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,476 | INFO     | [job] validate thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,599 | INFO     | [data] control thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,636 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,677 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,904 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,973 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:12,973 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:15,747 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:21,275 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:04:47] 2025-10-12 22:04:22,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:04:47] 2025-10-12 22:04:40,411 | INFO     | PID=7047 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 00:04:47] 2025-10-12 22:04:40,411 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:04:47] 2025-10-12 22:04:40,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:04:47] 2025-10-12 22:04:40,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:04:47] 2025-10-12 22:04:41,878 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:04:47] 2025-10-12 22:04:42,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456064669440)>']
[2025-10-13 00:04:47] 2025-10-12 22:04:42,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:04:47] 2025-10-12 22:04:42,422 | INFO     | [monitor] control thread has ended
[2025-10-13 00:04:47] 2025-10-12 22:04:47,162 | INFO     | all workflow threads have been joined
[2025-10-13 00:04:47] 2025-10-12 22:04:47,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:04:47] 2025-10-12 22:04:47,163 | INFO     | traces error code: 0
[2025-10-13 00:04:47] 2025-10-12 22:04:47,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:04:47] 2025-10-12 22:04:47,225 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:04:47] 2025-10-12 22:04:47,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:04:47] 2025-10-12 22:04:47,228 [wrapper] pilotpid: 7047
[2025-10-13 00:04:47] 2025-10-12 22:04:47,229 [wrapper] Pilot exit status: 0
[2025-10-13 00:04:47] 2025-10-12 22:04:47,234 [wrapper] pandaids: 6840082094
[2025-10-13 00:04:47] 2025-10-12 22:04:47,259 [wrapper] cleanup supervisor_pilot 13290 7048
[2025-10-13 00:04:47] 2025-10-12 22:04:47,260 [wrapper] Test setup, not cleaning
[2025-10-13 00:04:47] 2025-10-12 22:04:47,261 [wrapper] apfmon messages muted
[2025-10-13 00:04:47] 2025-10-12 22:04:47,262 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:04:47] 2025-10-12 22:04:47,263 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:04:47]  *** Error codes and diagnostics ***
[2025-10-13 00:04:47]     "exeErrorCode": 0,
[2025-10-13 00:04:47]     "exeErrorDiag": "",
[2025-10-13 00:04:47]     "pilotErrorCode": 0,
[2025-10-13 00:04:47]     "pilotErrorDiag": "",
[2025-10-13 00:04:47]  *** Listing of results directory ***
[2025-10-13 00:04:47] total 406416
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user    557409 Oct 12 15:45 pilot3.tar.gz
[2025-10-13 00:04:47] -rwx------ 1 mf493845 unix-user     36292 Oct 12 15:47 runpilot2-wrapper.sh
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      5112 Oct 12 15:47 queuedata.json
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user       100 Oct 12 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:04:47] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 12 22:21 run_atlas
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user       105 Oct 12 22:21 job.xml
[2025-10-13 00:04:47] -rw-r--r-- 2 mf493845 unix-user 220490371 Oct 12 23:17 EVNT.46676267._004037.pool.root.1
[2025-10-13 00:04:47] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 23:17 start_atlas.sh
[2025-10-13 00:04:47] drwxrwx--x 2 mf493845 unix-user       100 Oct 12 23:17 shared
[2025-10-13 00:04:47] -rw-r--r-- 2 mf493845 unix-user    569674 Oct 12 23:17 input.tar.gz
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      6394 Oct 12 23:17 init_data.xml
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user         0 Oct 12 23:17 boinc_setup_complete
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      8192 Oct 12 23:17 boinc_mmap_file
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user         0 Oct 12 23:17 boinc_lockfile
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      2549 Oct 12 23:17 pandaJob.out
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user    975528 Oct 12 23:17 agis_schedconf.cvmfs.json
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user   1560580 Oct 12 23:17 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:04:47] drwx------ 5 mf493845 unix-user       440 Oct 12 23:17 pilot3
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user 190299370 Oct 13 00:03 HITS.46676269._079909.pool.root.1
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      1016 Oct 13 00:03 memory_monitor_summary.json
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user    307417 Oct 13 00:04 log.46676269._079909.job.log.tgz.1
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      7773 Oct 13 00:04 heartbeat.json
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user        95 Oct 13 00:04 pilot_heartbeat.json
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      5017 Oct 13 00:04 pilotlog.txt
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user    442398 Oct 13 00:04 log.46676269._079909.job.log.1
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user       357 Oct 13 00:04 output.list
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user       620 Oct 13 00:04 runtime_log
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user    768000 Oct 13 00:04 result.tar.gz
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user      9076 Oct 13 00:04 runtime_log.err
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user       643 Oct 13 00:04 bZaLDmgbBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm25jNDmFB1kbm.diag
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user     22765 Oct 13 00:04 stderr.txt
[2025-10-13 00:04:47] HITS file was successfully produced:
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user 190299370 Oct 13 00:03 shared/HITS.pool.root.1
[2025-10-13 00:04:47]  *** Contents of shared directory: ***
[2025-10-13 00:04:47] total 402492
[2025-10-13 00:04:47] -rw-r--r-- 2 mf493845 unix-user 220490371 Oct 12 23:17 ATLAS.root_0
[2025-10-13 00:04:47] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 23:17 start_atlas.sh
[2025-10-13 00:04:47] -rw-r--r-- 2 mf493845 unix-user    569674 Oct 12 23:17 input.tar.gz
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user 190299370 Oct 13 00:03 HITS.pool.root.1
[2025-10-13 00:04:47] -rw------- 1 mf493845 unix-user    768000 Oct 13 00:04 result.tar.gz
00:04:49 (2054): run_atlas exited; CPU time 20190.979008
00:04:49 (2054): called boinc_finish(0)

</stderr_txt>
]]>


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