Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:27:05 (978773): wrapper (7.7.26015): starting
15:27:05 (978773): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 15:27:05] Arguments: --nthreads 9
[2025-10-12 15:27:05] Threads: 9
[2025-10-12 15:27:05] Checking for CVMFS
[2025-10-12 15:27:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:27:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:27:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:27:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:27:06] 2.13.2.0 11275 64829 288056 151633 1 188 24255693 32935937 8157 16776704 10 132004956 99.631 123810226 8569 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:27:06] CVMFS is ok
[2025-10-12 15:27:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:27:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:27:06] Further information can be found at the LHC@home message board.
[2025-10-12 15:27:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:27:06] Checking for apptainer binary...
[2025-10-12 15:27:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:27:06] Running /usr/bin/apptainer --version
[2025-10-12 15:27:06] apptainer version 1.4.3-1.el9
[2025-10-12 15:27:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:27:06] c6-12-25-1.aglt2.org
[2025-10-12 15:27:06] apptainer works
[2025-10-12 15:27:07] Set ATHENA_PROC_NUMBER=9
[2025-10-12 15:27:07] Set ATHENA_CORE_NUMBER=9
[2025-10-12 15:27:07] Starting ATLAS job with PandaID=6840225903
[2025-10-12 15:27:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:43:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:43:09] 2025-10-12 22:42:35,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:43:09] 2025-10-12 22:42:35,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:43:09] 2025-10-12 22:42:35,946 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:43:09] 2025-10-12 22:42:35,947 | INFO     | sum of square deviations: 2160561440.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,950 | INFO     | sum of deviations: 42791978240.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,950 | INFO     | mean x: 1760303086.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,951 | INFO     | mean y: 2141876.4607329844
[2025-10-12 18:43:09] 2025-10-12 22:42:35,951 | INFO     | -- intersect: -34862338233.81878
[2025-10-12 18:43:09] 2025-10-12 22:42:35,951 | INFO     | intersect: -34862338233.81878
[2025-10-12 18:43:09] 2025-10-12 22:42:35,952 | INFO     | chi2: 3.2243300964481545
[2025-10-12 18:43:09] 2025-10-12 22:42:35,953 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 18:43:09] 2025-10-12 22:42:35,956 | INFO     | sum of deviations: 53182032295.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,956 | INFO     | mean x: 1760302933.5
[2025-10-12 18:43:09] 2025-10-12 22:42:35,956 | INFO     | mean y: 2151248.3870967743
[2025-10-12 18:43:09] 2025-10-12 22:42:35,957 | INFO     | -- intersect: -46916729018.57913
[2025-10-12 18:43:09] 2025-10-12 22:42:35,957 | INFO     | intersect: -46916729018.57913
[2025-10-12 18:43:09] 2025-10-12 22:42:35,958 | INFO     | chi2: 2.432644395146147
[2025-10-12 18:43:09] 2025-10-12 22:42:35,958 | INFO     | current chi2=2.432644395146147 (change=24.553494140507187 %)
[2025-10-12 18:43:09] 2025-10-12 22:42:35,958 | INFO     | right removable region: 185
[2025-10-12 18:43:09] 2025-10-12 22:42:35,959 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 18:43:09] 2025-10-12 22:42:35,962 | INFO     | sum of deviations: 7275126753.000002
[2025-10-12 18:43:09] 2025-10-12 22:42:35,962 | INFO     | mean x: 1760303238.5
[2025-10-12 18:43:09] 2025-10-12 22:42:35,963 | INFO     | mean y: 2174452.193548387
[2025-10-12 18:43:09] 2025-10-12 22:42:35,963 | INFO     | -- intersect: -6416174856.088363
[2025-10-12 18:43:09] 2025-10-12 22:42:35,963 | INFO     | intersect: -6416174856.088363
[2025-10-12 18:43:09] 2025-10-12 22:42:35,964 | INFO     | chi2: 1.255658889085896
[2025-10-12 18:43:09] 2025-10-12 22:42:35,964 | INFO     | current chi2=1.255658889085896 (change=61.05675127775844 %)
[2025-10-12 18:43:09] 2025-10-12 22:42:35,965 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,968 | INFO     | sum of deviations: -9348199430.999998
[2025-10-12 18:43:09] 2025-10-12 22:42:35,968 | INFO     | mean x: 1760303391.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,968 | INFO     | mean y: 2190583.7790055247
[2025-10-12 18:43:09] 2025-10-12 22:42:35,968 | INFO     | -- intersect: 8952016801.915628
[2025-10-12 18:43:09] 2025-10-12 22:42:35,969 | INFO     | intersect: 8952016801.915628
[2025-10-12 18:43:09] 2025-10-12 22:42:35,970 | INFO     | chi2: 0.8643383578198177
[2025-10-12 18:43:09] 2025-10-12 22:42:35,970 | INFO     | current chi2=0.8643383578198177 (change=31.164557083727946 %)
[2025-10-12 18:43:09] 2025-10-12 22:42:35,971 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,973 | INFO     | sum of deviations: -10808465224.5
[2025-10-12 18:43:09] 2025-10-12 22:42:35,974 | INFO     | mean x: 1760303543.5
[2025-10-12 18:43:09] 2025-10-12 22:42:35,974 | INFO     | mean y: 2192056.6193181816
[2025-10-12 18:43:09] 2025-10-12 22:42:35,974 | INFO     | -- intersect: 11257287598.016705
[2025-10-12 18:43:09] 2025-10-12 22:42:35,974 | INFO     | intersect: 11257287598.016705
[2025-10-12 18:43:09] 2025-10-12 22:42:35,975 | INFO     | chi2: 0.8538280641294494
[2025-10-12 18:43:09] 2025-10-12 22:42:35,975 | INFO     | current chi2=0.8538280641294494 (change=1.2159929725760557 %)
[2025-10-12 18:43:09] 2025-10-12 22:42:35,976 | INFO     | left removable region: 30
[2025-10-12 18:43:09] 2025-10-12 22:42:35,976 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,978 | INFO     | sum of deviations: 912309290.0000004
[2025-10-12 18:43:09] 2025-10-12 22:42:35,979 | INFO     | mean x: 1760303818.0
[2025-10-12 18:43:09] 2025-10-12 22:42:35,979 | INFO     | mean y: 2202902.141935484
[2025-10-12 18:43:09] 2025-10-12 22:42:35,979 | INFO     | -- intersect: -1388627857.188001
[2025-10-12 18:43:09] 2025-10-12 22:42:35,979 | INFO     | intersect: -1388627857.188001
[2025-10-12 18:43:09] 2025-10-12 22:42:35,980 | INFO     | chi2: 0.03560442235223405
[2025-10-12 18:43:09] 2025-10-12 22:42:35,980 | INFO     | -- intersect: -1388627857.188001
[2025-10-12 18:43:09] 2025-10-12 22:42:35,981 | INFO     | current memory leak: 0.79 B/s (using 155 data points, chi2=0.04)
[2025-10-12 18:43:09] 2025-10-12 22:42:35,982 | INFO     | could have reported an average CPU frequency of 1584 MHz (10 samples)
[2025-10-12 18:43:09] 2025-10-12 22:42:35,982 | INFO     | ..............................
[2025-10-12 18:43:09] 2025-10-12 22:42:35,983 | INFO     | . Timing measurements:
[2025-10-12 18:43:09] 2025-10-12 22:42:35,983 | INFO     | . get job = 0 s
[2025-10-12 18:43:09] 2025-10-12 22:42:35,983 | INFO     | . initial setup = 3 s
[2025-10-12 18:43:09] 2025-10-12 22:42:35,983 | INFO     | . payload setup = 12 s
[2025-10-12 18:43:09] 2025-10-12 22:42:35,983 | INFO     | . stage-in = 0 s
[2025-10-12 18:43:09] 2025-10-12 22:42:35,984 | INFO     | . payload execution = 11653 s
[2025-10-12 18:43:09] 2025-10-12 22:42:35,984 | INFO     | . stage-out = 3 s
[2025-10-12 18:43:09] 2025-10-12 22:42:35,984 | INFO     | . log creation = 0 s
[2025-10-12 18:43:09] 2025-10-12 22:42:35,984 | INFO     | ..............................
[2025-10-12 18:43:09] 2025-10-12 22:42:36,243 | INFO     | 
[2025-10-12 18:43:09] 2025-10-12 22:42:36,244 | INFO     | job summary report
[2025-10-12 18:43:09] 2025-10-12 22:42:36,244 | INFO     | --------------------------------------------------
[2025-10-12 18:43:09] 2025-10-12 22:42:36,244 | INFO     | PanDA job id: 6840225903
[2025-10-12 18:43:09] 2025-10-12 22:42:36,244 | INFO     | task id: 46676269
[2025-10-12 18:43:09] 2025-10-12 22:42:36,245 | INFO     | errors: (none)
[2025-10-12 18:43:09] 2025-10-12 22:42:36,245 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:43:09] 2025-10-12 22:42:36,245 | INFO     | pilot state: finished 
[2025-10-12 18:43:09] 2025-10-12 22:42:36,245 | INFO     | transexitcode: 0
[2025-10-12 18:43:09] 2025-10-12 22:42:36,245 | INFO     | exeerrorcode: 0
[2025-10-12 18:43:09] 2025-10-12 22:42:36,246 | INFO     | exeerrordiag: 
[2025-10-12 18:43:09] 2025-10-12 22:42:36,246 | INFO     | exitcode: 0
[2025-10-12 18:43:09] 2025-10-12 22:42:36,246 | INFO     | exitmsg: OK
[2025-10-12 18:43:09] 2025-10-12 22:42:36,246 | INFO     | cpuconsumptiontime: 97713 s
[2025-10-12 18:43:09] 2025-10-12 22:42:36,246 | INFO     | nevents: 400
[2025-10-12 18:43:09] 2025-10-12 22:42:36,246 | INFO     | neventsw: 0
[2025-10-12 18:43:09] 2025-10-12 22:42:36,247 | INFO     | pid: 989408
[2025-10-12 18:43:09] 2025-10-12 22:42:36,247 | INFO     | pgrp: 989408
[2025-10-12 18:43:09] 2025-10-12 22:42:36,247 | INFO     | corecount: 9
[2025-10-12 18:43:09] 2025-10-12 22:42:36,247 | INFO     | event service: False
[2025-10-12 18:43:09] 2025-10-12 22:42:36,247 | INFO     | sizes: {0: 2348686, 1: 2348885, 10: 2349147, 12: 2349175, 11669: 2379076, 11673: 2388258, 11685: 2388396}
[2025-10-12 18:43:09] 2025-10-12 22:42:36,248 | INFO     | --------------------------------------------------
[2025-10-12 18:43:09] 2025-10-12 22:42:36,248 | INFO     | 
[2025-10-12 18:43:09] 2025-10-12 22:42:36,248 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:43:09] 2025-10-12 22:42:36,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:43:09] 2025-10-12 22:42:36,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,292 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 22:42:36,292 | INFO     | job 6840225903 has completed (purged errors)
[2025-10-12 18:43:09] 2025-10-12 22:42:36,292 | INFO     | overall cleanup function is called
[2025-10-12 18:43:09] 2025-10-12 22:42:37,304 | INFO     | --- collectZombieJob: --- 10, [989408]
[2025-10-12 18:43:09] 2025-10-12 22:42:37,304 | INFO     | zombie collector waiting for pid 989408
[2025-10-12 18:43:09] 2025-10-12 22:42:37,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:43:09] 2025-10-12 22:42:37,305 | INFO     | collected zombie processes
[2025-10-12 18:43:09] 2025-10-12 22:42:37,305 | INFO     | will attempt to kill all subprocesses of pid=989408
[2025-10-12 18:43:09] 2025-10-12 22:42:38,191 | INFO     | process IDs to be killed: [989408] (in reverse order)
[2025-10-12 18:43:09] 2025-10-12 22:42:38,408 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:43:09] 2025-10-12 22:42:38,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:43:09] 2025-10-12 22:42:38,437 | INFO     | did not find any defunct processes belonging to 989408
[2025-10-12 18:43:09] 2025-10-12 22:42:38,463 | INFO     | did not find any defunct processes belonging to 989408
[2025-10-12 18:43:09] 2025-10-12 22:42:38,463 | INFO     | ready for new job
[2025-10-12 18:43:09] 2025-10-12 22:42:38,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:43:09] 2025-10-12 22:42:38,468 | INFO     | ***************************************
[2025-10-12 18:43:09] 2025-10-12 22:42:38,468 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:43:09] 2025-10-12 22:42:38,468 | INFO     | ***************************************
[2025-10-12 18:43:09] 2025-10-12 22:42:38,468 | INFO     | 
[2025-10-12 18:43:09] 2025-10-12 22:42:38,496 | INFO     | architecture information:
[2025-10-12 18:43:09] 2025-10-12 22:42:38,496 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:43:09] 2025-10-12 22:42:38,530 | INFO     | cat /etc/os-release:
[2025-10-12 18:43:09] NAME="CentOS Linux"
[2025-10-12 18:43:09] VERSION="7 (Core)"
[2025-10-12 18:43:09] ID="centos"
[2025-10-12 18:43:09] ID_LIKE="rhel fedora"
[2025-10-12 18:43:09] VERSION_ID="7"
[2025-10-12 18:43:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:43:09] ANSI_COLOR="0;31"
[2025-10-12 18:43:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:43:09] HOME_URL="https://www.centos.org/"
[2025-10-12 18:43:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:43:09] 
[2025-10-12 18:43:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:43:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:43:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:43:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:43:09] 
[2025-10-12 18:43:09] 2025-10-12 22:42:38,532 | INFO     | ***************************************
[2025-10-12 18:43:09] 2025-10-12 22:42:39,036 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:43:09] 2025-10-12 22:42:39,068 | INFO     | sufficient remaining disk space (71167901696 B)
[2025-10-12 18:43:09] 2025-10-12 22:42:39,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:43:09] 2025-10-12 22:42:39,069 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:43:09] 2025-10-12 22:42:39,069 | INFO     | update_server=False
[2025-10-12 18:43:09] 2025-10-12 22:42:39,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:43:09] 2025-10-12 22:42:39,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 22:42:39,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 22:42:39,361 | INFO     | aborting loop
[2025-10-12 18:43:09] 2025-10-12 22:42:39,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 22:42:39,599 | INFO     | all job control threads have been joined
[2025-10-12 18:43:09] 2025-10-12 22:42:39,837 | INFO     | all payload control threads have been joined
[2025-10-12 18:43:09] 2025-10-12 22:42:40,076 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:40,141 | INFO     | all data control threads have been joined
[2025-10-12 18:43:09] 2025-10-12 22:42:40,324 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:40,367 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:40,546 | INFO     | [job] validate thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:40,605 | INFO     | [job] control thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:40,692 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:40,843 | INFO     | [payload] control thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:41,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:41,147 | INFO     | [data] control thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:41,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 22:42:41,309 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:41,397 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:41,554 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:41,657 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:41,658 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:42,259 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:43,316 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:43:09] 2025-10-12 22:42:46,751 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:43:09] 2025-10-12 22:42:47,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140347993413440)>', '<ExcThread(monitor, started 140347476780800)>']
[2025-10-12 18:43:09] 2025-10-12 22:42:52,430 | INFO     | all workflow threads have been joined
[2025-10-12 18:43:09] 2025-10-12 22:42:52,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:43:09] 2025-10-12 22:42:52,432 | INFO     | traces error code: 0
[2025-10-12 18:43:09] 2025-10-12 22:42:52,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:43:09] 2025-10-12 22:43:08,958 | INFO     | PID=982542 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 18:43:09] 2025-10-12 22:43:08,958 | INFO     | .. there are 10 such processes running
[2025-10-12 18:43:09] 2025-10-12 22:43:08,961 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:43:09] 2025-10-12 22:43:08,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:43:09] 2025-10-12 22:43:08,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:43:09] 2025-10-12 22:43:08,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:43:09] 2025-10-12 22:43:08,962 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 18:43:09] 2025-10-12 22:43:08,962 | INFO     | [monitor] control thread has ended
[2025-10-12 18:43:09] 2025-10-12 22:43:09,214 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:43:09] 2025-10-12 22:43:09,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:43:09] 2025-10-12 22:43:09,224 [wrapper] pilotpid: 982542
[2025-10-12 18:43:09] 2025-10-12 22:43:09,229 [wrapper] Pilot exit status: 0
[2025-10-12 18:43:09] 2025-10-12 22:43:09,249 [wrapper] pandaids: 6840225903
[2025-10-12 18:43:09] 2025-10-12 22:43:09,394 [wrapper] cleanup supervisor_pilot 1504605 982543
[2025-10-12 18:43:09] 2025-10-12 22:43:09,400 [wrapper] Test setup, not cleaning
[2025-10-12 18:43:09] 2025-10-12 22:43:09,405 [wrapper] apfmon messages muted
[2025-10-12 18:43:09] 2025-10-12 22:43:09,410 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:43:09] 2025-10-12 22:43:09,415 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:43:09]  *** Error codes and diagnostics ***
[2025-10-12 18:43:09]     "exeErrorCode": 0,
[2025-10-12 18:43:09]     "exeErrorDiag": "",
[2025-10-12 18:43:09]     "pilotErrorCode": 0,
[2025-10-12 18:43:09]     "pilotErrorDiag": "",
[2025-10-12 18:43:09]  *** Listing of results directory ***
[2025-10-12 18:43:09] total 408856
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 18:43:09] -rwx------. 1 boincer umatlas     36292 Oct 12 12:02 runpilot2-wrapper.sh
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:02 queuedata.json
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:43:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:27 run_atlas
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:27 job.xml
[2025-10-12 18:43:09] -rw-r--r--. 2 boincer umatlas 219778533 Oct 12 15:27 EVNT.46676267._004600.pool.root.1
[2025-10-12 18:43:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:27 start_atlas.sh
[2025-10-12 18:43:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:27 shared
[2025-10-12 18:43:09] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 15:27 input.tar.gz
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:27 boinc_lockfile
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:27 pandaJob.out
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas    975528 Oct 12 15:27 agis_schedconf.cvmfs.json
[2025-10-12 18:43:09] drwx------. 5 boincer umatlas      4096 Oct 12 15:27 pilot3
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 18:36 init_data.xml
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas 190927625 Oct 12 18:41 HITS.46676269._082943.pool.root.1
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas       530 Oct 12 18:41 boinc_task_state.xml
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas      1036 Oct 12 18:42 memory_monitor_summary.json
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas    435142 Oct 12 18:42 log.46676269._082943.job.log.tgz.1
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas      7824 Oct 12 18:42 heartbeat.json
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:43 wrapper_checkpoint.txt
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:43 boinc_mmap_file
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas        95 Oct 12 18:43 pilot_heartbeat.json
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas       892 Oct 12 18:43 pilotlog.txt
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas   1593605 Oct 12 18:43 log.46676269._082943.job.log.1
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas       357 Oct 12 18:43 output.list
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:43 runtime_log
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas   2048000 Oct 12 18:43 result.tar.gz
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas       656 Oct 12 18:43 wMGLDmUhDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0MUMDmk7iFKn.diag
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 18:43 runtime_log.err
[2025-10-12 18:43:09] -rw-r--r--. 1 boincer umatlas     20870 Oct 12 18:43 stderr.txt
[2025-10-12 18:43:09] HITS file was successfully produced:
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas 190927625 Oct 12 18:41 shared/HITS.pool.root.1
[2025-10-12 18:43:09]  *** Contents of shared directory: ***
[2025-10-12 18:43:09] total 403668
[2025-10-12 18:43:09] -rw-r--r--. 2 boincer umatlas 219778533 Oct 12 15:27 ATLAS.root_0
[2025-10-12 18:43:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:27 start_atlas.sh
[2025-10-12 18:43:09] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 15:27 input.tar.gz
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas 190927625 Oct 12 18:41 HITS.pool.root.1
[2025-10-12 18:43:09] -rw-------. 1 boincer umatlas   2048000 Oct 12 18:43 result.tar.gz
18:43:11 (978773): run_atlas exited; CPU time 98927.374803
18:43:11 (978773): called boinc_finish(0)

</stderr_txt>
]]>

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