Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:55:34 (3164292): wrapper (7.7.26015): starting
15:55:34 (3164292): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:55:34] Arguments: --nthreads 8
[2025-10-12 15:55:34] Threads: 8
[2025-10-12 15:55:34] Checking for CVMFS
[2025-10-12 15:55:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:55:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:55:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:55:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:55:36] 2.13.2.0 231297 53107 343012 151635 2 27 40135778 40960001 20573 16776704 0 135121337 99.639 129226322 29295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:55:36] CVMFS is ok
[2025-10-12 15:55:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:55:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:55:36] Further information can be found at the LHC@home message board.
[2025-10-12 15:55:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:55:36] Checking for apptainer binary...
[2025-10-12 15:55:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:55:36] Running /usr/bin/apptainer --version
[2025-10-12 15:55:36] apptainer version 1.4.3-1.el9
[2025-10-12 15:55:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:55:37] c6-5-7-4.aglt2.org
[2025-10-12 15:55:37] apptainer works
[2025-10-12 15:55:37] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:55:37] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:55:37] Starting ATLAS job with PandaID=6840225863
[2025-10-12 15:55:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:13:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:13:05] 2025-10-13 02:12:17,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:13:05] 2025-10-13 02:12:18,047 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:13:05] 2025-10-13 02:12:18,047 | INFO     | sum of square deviations: 15202250226.153135
[2025-10-12 22:13:05] 2025-10-13 02:12:18,084 | INFO     | sum of deviations: 71215101308.94556
[2025-10-12 22:13:05] 2025-10-13 02:12:18,084 | INFO     | mean x: 1760310317.9289618
[2025-10-12 22:13:05] 2025-10-13 02:12:18,084 | INFO     | mean y: 2482235.8825136614
[2025-10-12 22:13:05] 2025-10-13 02:12:18,084 | INFO     | -- intersect: -8243709989.715075
[2025-10-12 22:13:06] 2025-10-13 02:12:18,084 | INFO     | intersect: -8243709989.715075
[2025-10-12 22:13:06] 2025-10-13 02:12:18,122 | INFO     | chi2: 4.3469264310265014
[2025-10-12 22:13:06] 2025-10-13 02:12:18,123 | INFO     | sum of square deviations: 14587687638.587204
[2025-10-12 22:13:06] 2025-10-13 02:12:18,125 | INFO     | sum of deviations: 118613080608.13579
[2025-10-12 22:13:06] 2025-10-13 02:12:18,125 | INFO     | mean x: 1760310165.432133
[2025-10-12 22:13:06] 2025-10-13 02:12:18,126 | INFO     | mean y: 2493900.005540166
[2025-10-12 22:13:06] 2025-10-13 02:12:18,126 | INFO     | -- intersect: -14310659542.86212
[2025-10-12 22:13:06] 2025-10-13 02:12:18,163 | INFO     | intersect: -14310659542.86212
[2025-10-12 22:13:06] 2025-10-13 02:12:18,164 | INFO     | chi2: 2.8403714006189626
[2025-10-12 22:13:06] 2025-10-13 02:12:18,164 | INFO     | current chi2=2.8403714006189626 (change=34.65793714966956 %)
[2025-10-12 22:13:06] 2025-10-13 02:12:18,164 | INFO     | sum of square deviations: 13989916185.51405
[2025-10-12 22:13:06] 2025-10-13 02:12:18,193 | INFO     | sum of deviations: 117040628683.18814
[2025-10-12 22:13:06] 2025-10-13 02:12:18,193 | INFO     | mean x: 1760310012.9353933
[2025-10-12 22:13:06] 2025-10-13 02:12:18,193 | INFO     | mean y: 2493498.834269663
[2025-10-12 22:13:06] 2025-10-13 02:12:18,194 | INFO     | -- intersect: -14724384622.465864
[2025-10-12 22:13:06] 2025-10-13 02:12:18,194 | INFO     | intersect: -14724384622.465864
[2025-10-12 22:13:06] 2025-10-13 02:12:18,194 | INFO     | chi2: 2.8407848550146118
[2025-10-12 22:13:06] 2025-10-13 02:12:18,194 | INFO     | current chi2=2.8407848550146118 (change=-0.014556349763238921 %)
[2025-10-12 22:13:06] 2025-10-13 02:12:18,194 | INFO     | right removable region: 355
[2025-10-12 22:13:06] 2025-10-13 02:12:18,195 | INFO     | sum of square deviations: 14587614072.72009
[2025-10-12 22:13:06] 2025-10-13 02:12:18,226 | INFO     | sum of deviations: -21448964749.002743
[2025-10-12 22:13:06] 2025-10-13 02:12:18,226 | INFO     | mean x: 1760310470.4349031
[2025-10-12 22:13:06] 2025-10-13 02:12:18,226 | INFO     | mean y: 2505181.0637119114
[2025-10-12 22:13:06] 2025-10-13 02:12:18,226 | INFO     | -- intersect: 2590785693.520285
[2025-10-12 22:13:06] 2025-10-13 02:12:18,226 | INFO     | intersect: 2590785693.520285
[2025-10-12 22:13:06] 2025-10-13 02:12:18,227 | INFO     | chi2: 1.8902035801323938
[2025-10-12 22:13:06] 2025-10-13 02:12:18,227 | INFO     | current chi2=1.8902035801323938 (change=56.516319976318684 %)
[2025-10-12 22:13:06] 2025-10-13 02:12:18,227 | INFO     | sum of square deviations: 13989790952.640385
[2025-10-12 22:13:06] 2025-10-13 02:12:18,256 | INFO     | sum of deviations: -43359252130.04494
[2025-10-12 22:13:06] 2025-10-13 02:12:18,257 | INFO     | mean x: 1760310622.9382021
[2025-10-12 22:13:06] 2025-10-13 02:12:18,257 | INFO     | mean y: 2510752.679775281
[2025-10-12 22:13:06] 2025-10-13 02:12:18,257 | INFO     | -- intersect: 5458328669.156112
[2025-10-12 22:13:06] 2025-10-13 02:12:18,257 | INFO     | intersect: 5458328669.156112
[2025-10-12 22:13:06] 2025-10-13 02:12:18,257 | INFO     | chi2: 1.7339041633672103
[2025-10-12 22:13:06] 2025-10-13 02:12:18,258 | INFO     | current chi2=1.7339041633672103 (change=8.26891972949474 %)
[2025-10-12 22:13:06] 2025-10-13 02:12:18,291 | INFO     | left removable region: 20
[2025-10-12 22:13:06] 2025-10-13 02:12:18,292 | INFO     | sum of square deviations: 11657161257.032894
[2025-10-12 22:13:06] 2025-10-13 02:12:18,295 | INFO     | sum of deviations: -19019256122.743286
[2025-10-12 22:13:06] 2025-10-13 02:12:18,296 | INFO     | mean x: 1760310592.4537313
[2025-10-12 22:13:06] 2025-10-13 02:12:18,296 | INFO     | mean y: 2529853.2746268655
[2025-10-12 22:13:06] 2025-10-13 02:12:18,296 | INFO     | -- intersect: 2874566816.2407827
[2025-10-12 22:13:06] 2025-10-13 02:12:18,296 | INFO     | intersect: 2874566816.2407827
[2025-10-12 22:13:06] 2025-10-13 02:12:18,315 | INFO     | chi2: 0.05951902773322656
[2025-10-12 22:13:06] 2025-10-13 02:12:18,315 | INFO     | -- intersect: 2874566816.2407827
[2025-10-12 22:13:06] 2025-10-13 02:12:18,316 | INFO     | current memory leak: -1.63 B/s (using 335 data points, chi2=0.06)
[2025-10-12 22:13:06] 2025-10-13 02:12:18,334 | INFO     | could have reported an average CPU frequency of 2736 MHz (16 samples)
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | ..............................
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . Timing measurements:
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . get job = 0 s
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . initial setup = 6 s
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . payload setup = 49 s
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . stage-in = 0 s
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . payload execution = 22334 s
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . stage-out = 7 s
[2025-10-12 22:13:06] 2025-10-13 02:12:18,335 | INFO     | . log creation = 1 s
[2025-10-12 22:13:06] 2025-10-13 02:12:18,336 | INFO     | ..............................
[2025-10-12 22:13:06] 2025-10-13 02:12:19,486 | INFO     | 
[2025-10-12 22:13:06] 2025-10-13 02:12:19,486 | INFO     | job summary report
[2025-10-12 22:13:06] 2025-10-13 02:12:19,486 | INFO     | --------------------------------------------------
[2025-10-12 22:13:06] 2025-10-13 02:12:19,486 | INFO     | PanDA job id: 6840225863
[2025-10-12 22:13:06] 2025-10-13 02:12:19,486 | INFO     | task id: 46676269
[2025-10-12 22:13:06] 2025-10-13 02:12:19,486 | INFO     | errors: (none)
[2025-10-12 22:13:06] 2025-10-13 02:12:19,487 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:13:06] 2025-10-13 02:12:19,536 | INFO     | pilot state: finished 
[2025-10-12 22:13:06] 2025-10-13 02:12:19,536 | INFO     | transexitcode: 0
[2025-10-12 22:13:06] 2025-10-13 02:12:19,536 | INFO     | exeerrorcode: 0
[2025-10-12 22:13:06] 2025-10-13 02:12:19,536 | INFO     | exeerrordiag: 
[2025-10-12 22:13:06] 2025-10-13 02:12:19,536 | INFO     | exitcode: 0
[2025-10-12 22:13:06] 2025-10-13 02:12:19,536 | INFO     | exitmsg: OK
[2025-10-12 22:13:06] 2025-10-13 02:12:19,536 | INFO     | cpuconsumptiontime: 45777 s
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | nevents: 400
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | neventsw: 0
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | pid: 3179827
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | pgrp: 3179827
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | corecount: 8
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | event service: False
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | sizes: {0: 2348028, 1: 2348629, 3: 2348741, 4: 2348741, 5: 2348996, 16: 2348996, 27: 2349152, 38: 2349180, 44: 2349470, 49: 2349498, 22389: 2383724, 22399: 2392778
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | --------------------------------------------------
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | 
[2025-10-12 22:13:06] 2025-10-13 02:12:19,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 22:13:06] 2025-10-13 02:12:19,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:13:06] 2025-10-13 02:12:19,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,732 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:13:06] 2025-10-13 02:12:19,732 | INFO     | job 6840225863 has completed (purged errors)
[2025-10-12 22:13:06] 2025-10-13 02:12:19,732 | INFO     | overall cleanup function is called
[2025-10-12 22:13:06] 2025-10-13 02:12:20,918 | INFO     | --- collectZombieJob: --- 10, [3179827]
[2025-10-12 22:13:06] 2025-10-13 02:12:20,918 | INFO     | zombie collector waiting for pid 3179827
[2025-10-12 22:13:06] 2025-10-13 02:12:20,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:13:06] 2025-10-13 02:12:20,918 | INFO     | collected zombie processes
[2025-10-12 22:13:06] 2025-10-13 02:12:20,918 | INFO     | will attempt to kill all subprocesses of pid=3179827
[2025-10-12 22:13:06] 2025-10-13 02:12:24,320 | INFO     | PID=3169927 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:13:06] 2025-10-13 02:12:24,320 | INFO     | .. there are 30 such processes running
[2025-10-12 22:13:06] 2025-10-13 02:12:24,519 | INFO     | process IDs to be killed: [3179827] (in reverse order)
[2025-10-12 22:13:06] 2025-10-13 02:12:25,200 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:13:06] 2025-10-13 02:12:25,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:13:06] 2025-10-13 02:12:25,214 | INFO     | did not find any defunct processes belonging to 3179827
[2025-10-12 22:13:06] 2025-10-13 02:12:25,335 | INFO     | did not find any defunct processes belonging to 3179827
[2025-10-12 22:13:06] 2025-10-13 02:12:25,336 | INFO     | ready for new job
[2025-10-12 22:13:06] 2025-10-13 02:12:25,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:13:06] 2025-10-13 02:12:25,338 | INFO     | ***************************************
[2025-10-12 22:13:06] 2025-10-13 02:12:25,338 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:13:06] 2025-10-13 02:12:25,338 | INFO     | ***************************************
[2025-10-12 22:13:06] 2025-10-13 02:12:25,339 | INFO     | 
[2025-10-12 22:13:06] 2025-10-13 02:12:25,379 | INFO     | architecture information:
[2025-10-12 22:13:06] 2025-10-13 02:12:25,408 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:13:06] 2025-10-13 02:12:25,614 | INFO     | cat /etc/os-release:
[2025-10-12 22:13:06] NAME="CentOS Linux"
[2025-10-12 22:13:06] VERSION="7 (Core)"
[2025-10-12 22:13:06] ID="centos"
[2025-10-12 22:13:06] ID_LIKE="rhel fedora"
[2025-10-12 22:13:06] VERSION_ID="7"
[2025-10-12 22:13:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:13:06] ANSI_COLOR="0;31"
[2025-10-12 22:13:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:13:06] HOME_URL="https://www.centos.org/"
[2025-10-12 22:13:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:13:06] 
[2025-10-12 22:13:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:13:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:13:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:13:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:13:06] 
[2025-10-12 22:13:06] 2025-10-13 02:12:25,615 | INFO     | ***************************************
[2025-10-12 22:13:06] 2025-10-13 02:12:26,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 22:13:06] 2025-10-13 02:12:26,234 | INFO     | sufficient remaining disk space (74135371776 B)
[2025-10-12 22:13:06] 2025-10-13 02:12:26,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:13:06] 2025-10-13 02:12:26,234 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:13:06] 2025-10-13 02:12:26,235 | INFO     | update_server=False
[2025-10-12 22:13:06] 2025-10-13 02:12:26,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:13:06] 2025-10-13 02:12:26,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:13:06] 2025-10-13 02:12:26,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:13:06] 2025-10-13 02:12:26,236 | INFO     | aborting loop
[2025-10-12 22:13:06] 2025-10-13 02:12:26,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:13:06] 2025-10-13 02:12:27,103 | INFO     | all payload control threads have been joined
[2025-10-12 22:13:06] 2025-10-13 02:12:27,109 | INFO     | all data control threads have been joined
[2025-10-12 22:13:06] 2025-10-13 02:12:27,115 | INFO     | all job control threads have been joined
[2025-10-12 22:13:06] 2025-10-13 02:12:27,242 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:27,249 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:27,323 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:27,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:27,610 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:27,838 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:27,862 | INFO     | [job] validate thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:27,914 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:28,109 | INFO     | [payload] control thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:28,118 | INFO     | [data] control thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:28,122 | INFO     | [job] control thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:28,539 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:28,699 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:28,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:13:06] 2025-10-13 02:12:28,809 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:29,708 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:30,250 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:13:06] 2025-10-13 02:12:31,793 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:13:06] 2025-10-13 02:12:32,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023449995072)>', '<ExcThread(monitor, started 140022577624832)>']
[2025-10-12 22:13:06] 2025-10-13 02:12:37,385 | INFO     | all workflow threads have been joined
[2025-10-12 22:13:06] 2025-10-13 02:12:37,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:13:06] 2025-10-13 02:12:37,387 | INFO     | traces error code: 0
[2025-10-12 22:13:06] 2025-10-13 02:12:37,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:13:06] 2025-10-13 02:13:03,598 | INFO     | PID=3169927 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:13:06] 2025-10-13 02:13:03,598 | INFO     | .. there are 30 such processes running
[2025-10-12 22:13:06] 2025-10-13 02:13:03,599 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:13:06] 2025-10-13 02:13:03,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:13:06] 2025-10-13 02:13:03,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:13:06] 2025-10-13 02:13:03,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:13:06] 2025-10-13 02:13:03,600 | INFO     | [monitor] control thread has ended
[2025-10-12 22:13:06] 2025-10-13 02:13:04,501 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:13:06] 2025-10-13 02:13:04,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:13:06] 2025-10-13 02:13:04,507 [wrapper] pilotpid: 3169927
[2025-10-12 22:13:06] 2025-10-13 02:13:04,510 [wrapper] Pilot exit status: 0
[2025-10-12 22:13:06] 2025-10-13 02:13:04,756 [wrapper] pandaids: 6840225863
[2025-10-12 22:13:06] 2025-10-13 02:13:05,303 [wrapper] cleanup supervisor_pilot  242475 3169928
[2025-10-12 22:13:06] 2025-10-13 02:13:05,308 [wrapper] Test setup, not cleaning
[2025-10-12 22:13:06] 2025-10-13 02:13:05,311 [wrapper] apfmon messages muted
[2025-10-12 22:13:06] 2025-10-13 02:13:05,332 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:13:06] 2025-10-13 02:13:05,347 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:13:06]  *** Error codes and diagnostics ***
[2025-10-12 22:13:06]     "exeErrorCode": 0,
[2025-10-12 22:13:06]     "exeErrorDiag": "",
[2025-10-12 22:13:06]     "pilotErrorCode": 0,
[2025-10-12 22:13:06]     "pilotErrorDiag": "",
[2025-10-12 22:13:06]  *** Listing of results directory ***
[2025-10-12 22:13:06] total 413064
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 22:13:06] -rwx------. 1 boincer umatlas     36292 Oct 12 11:58 runpilot2-wrapper.sh
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:58 queuedata.json
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:13:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:55 run_atlas
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:55 job.xml
[2025-10-12 22:13:06] -rw-r--r--. 2 boincer umatlas 218693777 Oct 12 15:55 EVNT.46676267._004598.pool.root.1
[2025-10-12 22:13:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:55 start_atlas.sh
[2025-10-12 22:13:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:55 shared
[2025-10-12 22:13:06] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 15:55 input.tar.gz
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:55 boinc_lockfile
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 15:55 pandaJob.out
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas    975536 Oct 12 15:56 agis_schedconf.cvmfs.json
[2025-10-12 22:13:06] drwx------. 5 boincer umatlas      4096 Oct 12 15:56 pilot3
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas 193967603 Oct 12 22:09 HITS.46676269._082903.pool.root.1
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas       531 Oct 12 22:09 boinc_task_state.xml
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 22:10 init_data.xml
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas      1054 Oct 12 22:11 memory_monitor_summary.json
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas    546353 Oct 12 22:11 log.46676269._082903.job.log.tgz.1
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas      7823 Oct 12 22:12 heartbeat.json
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas        28 Oct 12 22:13 wrapper_checkpoint.txt
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:13 boinc_mmap_file
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas       823 Oct 12 22:13 pilotlog.txt
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas        95 Oct 12 22:13 pilot_heartbeat.json
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas   2659584 Oct 12 22:13 log.46676269._082903.job.log.1
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas       357 Oct 12 22:13 output.list
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:13 runtime_log
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas   3225600 Oct 12 22:13 result.tar.gz
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 22:13 runtime_log.err
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas       657 Oct 12 22:13 LU4LDmXdDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhMUMDmPOl8vn.diag
[2025-10-12 22:13:06] -rw-r--r--. 1 boincer umatlas     21158 Oct 12 22:13 stderr.txt
[2025-10-12 22:13:06] HITS file was successfully produced:
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas 193967603 Oct 12 22:09 shared/HITS.pool.root.1
[2025-10-12 22:13:06]  *** Contents of shared directory: ***
[2025-10-12 22:13:06] total 406728
[2025-10-12 22:13:06] -rw-r--r--. 2 boincer umatlas 218693777 Oct 12 15:55 ATLAS.root_0
[2025-10-12 22:13:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:55 start_atlas.sh
[2025-10-12 22:13:06] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 15:55 input.tar.gz
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas 193967603 Oct 12 22:09 HITS.pool.root.1
[2025-10-12 22:13:06] -rw-------. 1 boincer umatlas   3225600 Oct 12 22:13 result.tar.gz
22:13:07 (3164292): run_atlas exited; CPU time 46585.062615
22:13:07 (3164292): called boinc_finish(0)

</stderr_txt>
]]>

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