Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:07 (3389781): wrapper (7.7.26015): starting
15:22:07 (3389781): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 15:22:07] Arguments: --nthreads 9
[2025-10-12 15:22:07] Threads: 9
[2025-10-12 15:22:07] Checking for CVMFS
[2025-10-12 15:22:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:22:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:22:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:22:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:22:10] 2.13.2.0 3310087 19086 237596 151633 0 454 26505535 40960001 14066 16776704 0 40889846 99.794 20728472 36942 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:22:10] CVMFS is ok
[2025-10-12 15:22:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:22:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:22:10] Further information can be found at the LHC@home message board.
[2025-10-12 15:22:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:22:10] Checking for apptainer binary...
[2025-10-12 15:22:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:22:10] Running /usr/bin/apptainer --version
[2025-10-12 15:22:10] apptainer version 1.4.3-1.el9
[2025-10-12 15:22:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:22:10] c-206-38.aglt2.org
[2025-10-12 15:22:10] apptainer works
[2025-10-12 15:22:10] Set ATHENA_PROC_NUMBER=9
[2025-10-12 15:22:10] Set ATHENA_CORE_NUMBER=9
[2025-10-12 15:22:10] Starting ATLAS job with PandaID=6840181408
[2025-10-12 15:22:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:12:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:12:10] 2025-10-12 22:11:06,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:12:10] 2025-10-12 22:11:06,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:12:10] 2025-10-12 22:11:06,773 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:12:10] 2025-10-12 22:11:06,774 | INFO     | sum of square deviations: 1392800822.5818198
[2025-10-12 18:12:10] 2025-10-12 22:11:06,774 | INFO     | sum of deviations: 19768869383.236366
[2025-10-12 18:12:10] 2025-10-12 22:11:06,775 | INFO     | mean x: 1760302028.1636364
[2025-10-12 18:12:10] 2025-10-12 22:11:06,775 | INFO     | mean y: 2516917.4727272727
[2025-10-12 18:12:10] 2025-10-12 22:11:06,775 | INFO     | -- intersect: -24982520645.404446
[2025-10-12 18:12:10] 2025-10-12 22:11:06,775 | INFO     | intersect: -24982520645.404446
[2025-10-12 18:12:10] 2025-10-12 22:11:06,775 | INFO     | chi2: 2.2011489871323646
[2025-10-12 18:12:10] 2025-10-12 22:11:06,775 | INFO     | sum of square deviations: 1269968903.7749953
[2025-10-12 18:12:10] 2025-10-12 22:11:06,776 | INFO     | sum of deviations: 29585610129.79999
[2025-10-12 18:12:10] 2025-10-12 22:11:06,776 | INFO     | mean x: 1760301875.6625
[2025-10-12 18:12:10] 2025-10-12 22:11:06,776 | INFO     | mean y: 2528777.7
[2025-10-12 18:12:10] 2025-10-12 22:11:06,776 | INFO     | -- intersect: -41006038321.30474
[2025-10-12 18:12:10] 2025-10-12 22:11:06,776 | INFO     | intersect: -41006038321.30474
[2025-10-12 18:12:10] 2025-10-12 22:11:06,777 | INFO     | chi2: 1.4857277755161529
[2025-10-12 18:12:10] 2025-10-12 22:11:06,777 | INFO     | current chi2=1.4857277755161529 (change=32.50217117507596 %)
[2025-10-12 18:12:10] 2025-10-12 22:11:06,777 | INFO     | sum of square deviations: 1154578618.967738
[2025-10-12 18:12:10] 2025-10-12 22:11:06,778 | INFO     | sum of deviations: 28325299728.70968
[2025-10-12 18:12:10] 2025-10-12 22:11:06,778 | INFO     | mean x: 1760301723.1612904
[2025-10-12 18:12:10] 2025-10-12 22:11:06,778 | INFO     | mean y: 2527112.251612903
[2025-10-12 18:12:10] 2025-10-12 22:11:06,778 | INFO     | -- intersect: -43182989319.78353
[2025-10-12 18:12:10] 2025-10-12 22:11:06,778 | INFO     | intersect: -43182989319.78353
[2025-10-12 18:12:10] 2025-10-12 22:11:06,778 | INFO     | chi2: 1.4868386143080692
[2025-10-12 18:12:10] 2025-10-12 22:11:06,778 | INFO     | current chi2=1.4868386143080692 (change=-0.07476731674686499 %)
[2025-10-12 18:12:10] 2025-10-12 22:11:06,779 | INFO     | right removable region: 154
[2025-10-12 18:12:10] 2025-10-12 22:11:06,779 | INFO     | sum of square deviations: 1269972197.7749953
[2025-10-12 18:12:10] 2025-10-12 22:11:06,780 | INFO     | sum of deviations: -5959474535.775001
[2025-10-12 18:12:10] 2025-10-12 22:11:06,780 | INFO     | mean x: 1760302180.6625
[2025-10-12 18:12:10] 2025-10-12 22:11:06,780 | INFO     | mean y: 2548418.3375
[2025-10-12 18:12:10] 2025-10-12 22:11:06,780 | INFO     | -- intersect: 8262946590.287088
[2025-10-12 18:12:10] 2025-10-12 22:11:06,780 | INFO     | intersect: 8262946590.287088
[2025-10-12 18:12:10] 2025-10-12 22:11:06,780 | INFO     | chi2: 0.7455628396385424
[2025-10-12 18:12:10] 2025-10-12 22:11:06,780 | INFO     | current chi2=0.7455628396385424 (change=66.12846999467064 %)
[2025-10-12 18:12:10] 2025-10-12 22:11:06,781 | INFO     | sum of square deviations: 1154576057.6387038
[2025-10-12 18:12:10] 2025-10-12 22:11:06,781 | INFO     | sum of deviations: -5708695517.619356
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | mean x: 1760302333.167742
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | mean y: 2548128.7161290324
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | -- intersect: 8706201710.067442
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | intersect: 8706201710.067442
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | chi2: 0.7394751774893534
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | current chi2=0.7394751774893534 (change=0.8165189874726533 %)
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | left removable region: 20
[2025-10-12 18:12:10] 2025-10-12 22:11:06,782 | INFO     | sum of square deviations: 745964229.8880595
[2025-10-12 18:12:10] 2025-10-12 22:11:06,783 | INFO     | sum of deviations: 2433662486.738806
[2025-10-12 18:12:10] 2025-10-12 22:11:06,783 | INFO     | mean x: 1760302302.664179
[2025-10-12 18:12:10] 2025-10-12 22:11:06,783 | INFO     | mean y: 2563339.2164179105
[2025-10-12 18:12:10] 2025-10-12 22:11:06,783 | INFO     | -- intersect: -5740314814.547889
[2025-10-12 18:12:10] 2025-10-12 22:11:06,783 | INFO     | intersect: -5740314814.547889
[2025-10-12 18:12:10] 2025-10-12 22:11:06,784 | INFO     | chi2: 0.0006987196005443432
[2025-10-12 18:12:10] 2025-10-12 22:11:06,784 | INFO     | -- intersect: -5740314814.547889
[2025-10-12 18:12:10] 2025-10-12 22:11:06,784 | INFO     | current memory leak: 3.26 B/s (using 134 data points, chi2=0.00)
[2025-10-12 18:12:10] 2025-10-12 22:11:06,784 | INFO     | could have reported an average CPU frequency of 3214 MHz (9 samples)
[2025-10-12 18:12:10] 2025-10-12 22:11:06,784 | INFO     | ..............................
[2025-10-12 18:12:10] 2025-10-12 22:11:06,784 | INFO     | . Timing measurements:
[2025-10-12 18:12:10] 2025-10-12 22:11:06,784 | INFO     | . get job = 0 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,785 | INFO     | . initial setup = 6 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,785 | INFO     | . payload setup = 13 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,785 | INFO     | . stage-in = 0 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,785 | INFO     | . payload execution = 10017 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,785 | INFO     | . stage-out = 1 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,785 | INFO     | . log creation = 0 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,785 | INFO     | ..............................
[2025-10-12 18:12:10] 2025-10-12 22:11:06,868 | INFO     | 
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | job summary report
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | --------------------------------------------------
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | PanDA job id: 6840181408
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | task id: 46676269
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | errors: (none)
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | pilot state: finished 
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | transexitcode: 0
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | exeerrorcode: 0
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | exeerrordiag: 
[2025-10-12 18:12:10] 2025-10-12 22:11:06,869 | INFO     | exitcode: 0
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | exitmsg: OK
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | cpuconsumptiontime: 35291 s
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | nevents: 400
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | neventsw: 0
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | pid: 3401993
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | pgrp: 3401993
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | corecount: 9
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | event service: False
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 15: 2349175, 22: 2349203, 10035: 2378083, 10036: 2378210, 10037: 2387264, 10039: 2387320, 10064: 2387578}
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | --------------------------------------------------
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | 
[2025-10-12 18:12:10] 2025-10-12 22:11:06,870 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:12:10] 2025-10-12 22:11:07,109 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,111 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:12:10] 2025-10-12 22:11:07,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,111 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:12:10] 2025-10-12 22:11:07,111 | INFO     | job 6840181408 has completed (purged errors)
[2025-10-12 18:12:10] 2025-10-12 22:11:07,111 | INFO     | overall cleanup function is called
[2025-10-12 18:12:10] 2025-10-12 22:11:08,123 | INFO     | --- collectZombieJob: --- 10, [3401993]
[2025-10-12 18:12:10] 2025-10-12 22:11:08,124 | INFO     | zombie collector waiting for pid 3401993
[2025-10-12 18:12:10] 2025-10-12 22:11:08,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:12:10] 2025-10-12 22:11:08,124 | INFO     | collected zombie processes
[2025-10-12 18:12:10] 2025-10-12 22:11:08,124 | INFO     | will attempt to kill all subprocesses of pid=3401993
[2025-10-12 18:12:10] 2025-10-12 22:11:08,464 | INFO     | process IDs to be killed: [3401993] (in reverse order)
[2025-10-12 18:12:10] 2025-10-12 22:11:08,574 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:12:10] 2025-10-12 22:11:08,574 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:12:10] 2025-10-12 22:11:08,585 | INFO     | did not find any defunct processes belonging to 3401993
[2025-10-12 18:12:10] 2025-10-12 22:11:08,595 | INFO     | did not find any defunct processes belonging to 3401993
[2025-10-12 18:12:10] 2025-10-12 22:11:08,595 | INFO     | ready for new job
[2025-10-12 18:12:10] 2025-10-12 22:11:08,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:12:10] 2025-10-12 22:11:08,597 | INFO     | ***************************************
[2025-10-12 18:12:10] 2025-10-12 22:11:08,598 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:12:10] 2025-10-12 22:11:08,598 | INFO     | ***************************************
[2025-10-12 18:12:10] 2025-10-12 22:11:08,598 | INFO     | 
[2025-10-12 18:12:10] 2025-10-12 22:11:08,601 | INFO     | architecture information:
[2025-10-12 18:12:10] 2025-10-12 22:11:08,601 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:12:10] 2025-10-12 22:11:08,620 | INFO     | cat /etc/os-release:
[2025-10-12 18:12:10] NAME="CentOS Linux"
[2025-10-12 18:12:10] VERSION="7 (Core)"
[2025-10-12 18:12:10] ID="centos"
[2025-10-12 18:12:10] ID_LIKE="rhel fedora"
[2025-10-12 18:12:10] VERSION_ID="7"
[2025-10-12 18:12:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:12:10] ANSI_COLOR="0;31"
[2025-10-12 18:12:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:12:10] HOME_URL="https://www.centos.org/"
[2025-10-12 18:12:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:12:10] 
[2025-10-12 18:12:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:12:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:12:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:12:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:12:10] 
[2025-10-12 18:12:10] 2025-10-12 22:11:08,620 | INFO     | ***************************************
[2025-10-12 18:12:10] 2025-10-12 22:11:09,123 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:12:10] 2025-10-12 22:11:09,187 | INFO     | sufficient remaining disk space (84967161856 B)
[2025-10-12 18:12:10] 2025-10-12 22:11:09,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:12:10] 2025-10-12 22:11:09,187 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:12:10] 2025-10-12 22:11:09,187 | INFO     | update_server=False
[2025-10-12 18:12:10] 2025-10-12 22:11:09,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:12:10] 2025-10-12 22:11:09,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:12:10] 2025-10-12 22:11:09,188 | INFO     | aborting loop
[2025-10-12 18:12:10] 2025-10-12 22:11:09,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:12:10] 2025-10-12 22:11:09,934 | INFO     | all payload control threads have been joined
[2025-10-12 18:12:10] 2025-10-12 22:11:09,947 | INFO     | all job control threads have been joined
[2025-10-12 18:12:10] 2025-10-12 22:11:10,071 | INFO     | all data control threads have been joined
[2025-10-12 18:12:10] 2025-10-12 22:11:10,193 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,194 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,313 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,320 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,461 | INFO     | [job] validate thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:12:10] 2025-10-12 22:11:10,667 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,817 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,939 | INFO     | [payload] control thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:10,953 | INFO     | [job] control thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:11,077 | INFO     | [data] control thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:11,194 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:11,195 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:11,690 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:11,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:12:10] 2025-10-12 22:11:12,888 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:14,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:19,534 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:12:10] 2025-10-12 22:11:20,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:12:10] 2025-10-12 22:11:39,458 | INFO     | PID=3393507 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:12:10] 2025-10-12 22:11:39,458 | INFO     | .. there are 12 such processes running
[2025-10-12 18:12:10] 2025-10-12 22:11:39,459 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:12:10] 2025-10-12 22:11:39,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:12:10] 2025-10-12 22:11:39,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:12:10] 2025-10-12 22:12:04,427 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:12:10] 2025-10-12 22:12:05,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514746672960)>', '<ExcThread(monitor, started 140514384918272)>']
[2025-10-12 18:12:10] 2025-10-12 22:12:06,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:12:10] 2025-10-12 22:12:06,618 | INFO     | [monitor] control thread has ended
[2025-10-12 18:12:10] 2025-10-12 22:12:10,657 | INFO     | all workflow threads have been joined
[2025-10-12 18:12:10] 2025-10-12 22:12:10,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:12:10] 2025-10-12 22:12:10,659 | INFO     | traces error code: 0
[2025-10-12 18:12:10] 2025-10-12 22:12:10,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:12:10] 2025-10-12 22:12:10,759 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:12:10] 2025-10-12 22:12:10,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:12:10] 2025-10-12 22:12:10,763 [wrapper] pilotpid: 3393507
[2025-10-12 18:12:10] 2025-10-12 22:12:10,765 [wrapper] Pilot exit status: 0
[2025-10-12 18:12:10] 2025-10-12 22:12:10,775 [wrapper] pandaids: 6840181408
[2025-10-12 18:12:10] 2025-10-12 22:12:10,830 [wrapper] cleanup supervisor_pilot 3667567 3393508
[2025-10-12 18:12:10] 2025-10-12 22:12:10,833 [wrapper] Test setup, not cleaning
[2025-10-12 18:12:10] 2025-10-12 22:12:10,835 [wrapper] apfmon messages muted
[2025-10-12 18:12:10] 2025-10-12 22:12:10,836 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:12:10] 2025-10-12 22:12:10,838 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:12:10]  *** Error codes and diagnostics ***
[2025-10-12 18:12:10]     "exeErrorCode": 0,
[2025-10-12 18:12:10]     "exeErrorDiag": "",
[2025-10-12 18:12:10]     "pilotErrorCode": 0,
[2025-10-12 18:12:10]     "pilotErrorDiag": "",
[2025-10-12 18:12:10]  *** Listing of results directory ***
[2025-10-12 18:12:10] total 414784
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:11 queuedata.json
[2025-10-12 18:12:10] -rwx------. 1 boincer umatlas     36292 Oct 12 10:11 runpilot2-wrapper.sh
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:12:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:22 run_atlas
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:22 job.xml
[2025-10-12 18:12:10] -rw-r--r--. 2 boincer umatlas 219966092 Oct 12 15:22 EVNT.46676267._004217.pool.root.1
[2025-10-12 18:12:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:22 start_atlas.sh
[2025-10-12 18:12:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:22 shared
[2025-10-12 18:12:10] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 15:22 input.tar.gz
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:22 boinc_lockfile
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:22 pandaJob.out
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas    975528 Oct 12 15:22 agis_schedconf.cvmfs.json
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:12:10] drwx------. 5 boincer umatlas      4096 Oct 12 15:22 pilot3
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas      6898 Oct 12 18:02 init_data.xml
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas 197277346 Oct 12 18:09 HITS.46676269._080367.pool.root.1
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas       530 Oct 12 18:09 boinc_task_state.xml
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas      1034 Oct 12 18:10 memory_monitor_summary.json
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas    412901 Oct 12 18:10 log.46676269._080367.job.log.tgz.1
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas      7776 Oct 12 18:11 heartbeat.json
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas        95 Oct 12 18:11 pilot_heartbeat.json
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:12 boinc_mmap_file
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas        27 Oct 12 18:12 wrapper_checkpoint.txt
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas      4896 Oct 12 18:12 pilotlog.txt
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas   1381570 Oct 12 18:12 log.46676269._080367.job.log.1
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas       357 Oct 12 18:12 output.list
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:12 runtime_log
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas   1812480 Oct 12 18:12 result.tar.gz
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 18:12 runtime_log.err
[2025-10-12 18:12:10] -rw-------. 1 boincer umatlas       654 Oct 12 18:12 LrKKDmhyBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxBkNDmamsAem.diag
[2025-10-12 18:12:10] -rw-r--r--. 1 boincer umatlas     20520 Oct 12 18:12 stderr.txt
[2025-10-12 18:12:11] HITS file was successfully produced:
[2025-10-12 18:12:11] -rw-------. 1 boincer umatlas 197277346 Oct 12 18:09 shared/HITS.pool.root.1
[2025-10-12 18:12:11]  *** Contents of shared directory: ***
[2025-10-12 18:12:11] total 409824
[2025-10-12 18:12:11] -rw-r--r--. 2 boincer umatlas 219966092 Oct 12 15:22 ATLAS.root_0
[2025-10-12 18:12:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:22 start_atlas.sh
[2025-10-12 18:12:11] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 15:22 input.tar.gz
[2025-10-12 18:12:11] -rw-------. 1 boincer umatlas 197277346 Oct 12 18:09 HITS.pool.root.1
[2025-10-12 18:12:11] -rw-------. 1 boincer umatlas   1812480 Oct 12 18:12 result.tar.gz
18:12:12 (3389781): run_atlas exited; CPU time 35353.919896
18:12:12 (3389781): called boinc_finish(0)

</stderr_txt>
]]>

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