Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:40:40 (159419): wrapper (7.7.26015): starting
12:40:40 (159419): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:40:40] Arguments: --nthreads 12
[2025-10-12 12:40:40] Threads: 12
[2025-10-12 12:40:40] Checking for CVMFS
[2025-10-12 12:40:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:40:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:40:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:40:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:40:40] 2.11.5.0 2609 31927 216308 151635 2 484 27554336 45568001 17893 130560 0 321480733 99.864 133433367 24670 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 12:40:40] CVMFS is ok
[2025-10-12 12:40:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:40:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:40:40] Further information can be found at the LHC@home message board.
[2025-10-12 12:40:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:40:40] Checking for apptainer binary...
[2025-10-12 12:40:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:40:40] Running /usr/bin/apptainer --version
[2025-10-12 12:40:40] apptainer version 1.4.1-1.el9
[2025-10-12 12:40:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:40:40] wns0049.triumf.lcg
[2025-10-12 12:40:40] apptainer works
[2025-10-12 12:40:40] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:40:40] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:40:41] Starting ATLAS job with PandaID=6840530588
[2025-10-12 12:40:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:45:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | INFO     | will not add max space = 0 B to job metrics
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | WARNING  | wrong length of table data, x=[1760298096.0], y=[1556.0] (must be same and length>=4)
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | INFO     | could have reported an average CPU frequency of 2668 MHz (4 samples)
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | INFO     | ..............................
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . Timing measurements:
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . get job = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . initial setup = 3 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . payload setup = 10 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . stage-in = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . payload execution = 33 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . stage-out = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . log creation = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | ..............................
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840530588/pilotlog.txt
[2025-10-12 12:45:04] 2025-10-12 19:44:09,927 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 12:45:04] - Log from pilotlog.txt -
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | found no stored workdir sizes
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | INFO     | will not add max space = 0 B to job metrics
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | WARNING  | wrong length of table data, x=[1760298096.0], y=[1556.0] (must be same and length>=4)
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | INFO     | could have reported an average CPU frequency of 2668 MHz (4 samples)
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | INFO     | ..............................
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . Timing measurements:
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . get job = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . initial setup = 3 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . payload setup = 10 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . stage-in = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . payload execution = 33 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . stage-out = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . log creation = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | ..............................
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840530588/pilotlog.txt
[2025-10-12 12:45:04] 2025-10-12 19:44:09,927 | WARNING  | 
[2025-10-12 12:45:04] [begin log extracts]
[2025-10-12 12:45:04] - Log from pilotlog.txt -
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | WARNING  | found no stored workdir sizes
[2025-10-12 12:45:04] 2025-10-12 19:44:09,911 | INFO     | will not add max space = 0 B to job metrics
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | WARNING  | wrong length of table data, x=[1760298096.0], y=[1556.0] (must be same and length>=4)
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | INFO     | could have reported an average CPU frequency of 2668 MHz (4 samples)
[2025-10-12 12:45:04] 2025-10-12 19:44:09,912 | INFO     | ..............................
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . Timing measurements:
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . get job = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . initial setup = 3 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . payload setup = 10 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . stage-in = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . payload execution = 33 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . stage-out = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | . log creation = 0 s
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | ..............................
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 12:45:04] 2025-10-12 19:44:09,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840530588/pilotlog.txt
[2025-10-12 12:45:04] [end log extracts]
[2025-10-12 12:45:04] 2025-10-12 19:44:09,927 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 12:45:04] 2025-10-12 19:44:09,928 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 12:45:04] 2025-10-12 19:44:10,003 | INFO     | 
[2025-10-12 12:45:04] 2025-10-12 19:44:10,003 | INFO     | job summary report
[2025-10-12 12:45:04] 2025-10-12 19:44:10,003 | INFO     | --------------------------------------------------
[2025-10-12 12:45:04] 2025-10-12 19:44:10,003 | INFO     | PanDA job id: 6840530588
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | task id: 46676269
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 12:41:55,511 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | pilot state: failed 
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | transexitcode: 65
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | exeerrorcode: 65
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | exitcode: 65
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | nevents: 0
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | neventsw: 0
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | pid: 169682
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | pgrp: 169682
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | corecount: 12
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | event service: False
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | sizes: {0: 2348632, 1: 2348831, 9: 2349093, 11: 2349121, 44: 2372322, 45: 2376614, 46: 2376770, 174: 2376936}
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | --------------------------------------------------
[2025-10-12 12:45:04] 2025-10-12 19:44:10,004 | INFO     | 
[2025-10-12 12:45:04] 2025-10-12 19:44:10,005 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 12:45:04] 2025-10-12 19:44:10,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:45:04] 2025-10-12 19:44:10,023 | INFO     | job 6840530588 has completed (purged errors)
[2025-10-12 12:45:04] 2025-10-12 19:44:10,023 | INFO     | overall cleanup function is called
[2025-10-12 12:45:04] 2025-10-12 19:44:11,029 | INFO     | --- collectZombieJob: --- 10, [169682]
[2025-10-12 12:45:04] 2025-10-12 19:44:11,029 | INFO     | zombie collector waiting for pid 169682
[2025-10-12 12:45:04] 2025-10-12 19:44:11,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:45:04] 2025-10-12 19:44:11,030 | INFO     | collected zombie processes
[2025-10-12 12:45:04] 2025-10-12 19:44:11,030 | INFO     | will attempt to kill all subprocesses of pid=169682
[2025-10-12 12:45:04] 2025-10-12 19:44:11,283 | INFO     | process IDs to be killed: [169682] (in reverse order)
[2025-10-12 12:45:04] 2025-10-12 19:44:11,353 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:45:04] 2025-10-12 19:44:11,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:45:04] 2025-10-12 19:44:11,380 | INFO     | did not find any defunct processes belonging to 169682
[2025-10-12 12:45:04] 2025-10-12 19:44:11,388 | INFO     | did not find any defunct processes belonging to 169682
[2025-10-12 12:45:04] 2025-10-12 19:44:11,388 | INFO     | ready for new job
[2025-10-12 12:45:04] 2025-10-12 19:44:11,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:45:04] 2025-10-12 19:44:11,389 | INFO     | ***************************************
[2025-10-12 12:45:04] 2025-10-12 19:44:11,390 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:45:04] 2025-10-12 19:44:11,390 | INFO     | ***************************************
[2025-10-12 12:45:04] 2025-10-12 19:44:11,390 | INFO     | 
[2025-10-12 12:45:04] 2025-10-12 19:44:11,392 | INFO     | architecture information:
[2025-10-12 12:45:04] 2025-10-12 19:44:11,414 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:45:04] 2025-10-12 19:44:11,449 | INFO     | cat /etc/os-release:
[2025-10-12 12:45:04] NAME="CentOS Linux"
[2025-10-12 12:45:04] VERSION="7 (Core)"
[2025-10-12 12:45:04] ID="centos"
[2025-10-12 12:45:04] ID_LIKE="rhel fedora"
[2025-10-12 12:45:04] VERSION_ID="7"
[2025-10-12 12:45:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:45:04] ANSI_COLOR="0;31"
[2025-10-12 12:45:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:45:04] HOME_URL="https://www.centos.org/"
[2025-10-12 12:45:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:45:04] 
[2025-10-12 12:45:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:45:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:45:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:45:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:45:04] 
[2025-10-12 12:45:04] 2025-10-12 19:44:11,449 | INFO     | ***************************************
[2025-10-12 12:45:04] 2025-10-12 19:44:11,952 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 12:45:04] 2025-10-12 19:44:11,984 | INFO     | sufficient remaining disk space (1943892131840 B)
[2025-10-12 12:45:04] 2025-10-12 19:44:11,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:45:04] 2025-10-12 19:44:11,985 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:45:04] 2025-10-12 19:44:11,985 | INFO     | update_server=False
[2025-10-12 12:45:04] 2025-10-12 19:44:11,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:45:04] 2025-10-12 19:44:11,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:45:04] 2025-10-12 19:44:11,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:45:04] 2025-10-12 19:44:12,090 | INFO     | all payload control threads have been joined
[2025-10-12 12:45:04] 2025-10-12 19:44:12,099 | INFO     | all data control threads have been joined
[2025-10-12 12:45:04] 2025-10-12 19:44:12,190 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:45:04] 2025-10-12 19:44:12,190 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:45:04] 2025-10-12 19:44:12,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:45:04] 2025-10-12 19:44:12,191 | INFO     | will abort loop
[2025-10-12 12:45:04] 2025-10-12 19:44:12,292 | INFO     | all job control threads have been joined
[2025-10-12 12:45:04] 2025-10-12 19:44:12,990 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:12,998 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,055 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,096 | INFO     | [payload] control thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,113 | INFO     | [data] control thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,196 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,298 | INFO     | [job] control thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,400 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,525 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,717 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,888 | INFO     | [job] validate thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:13,998 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:14,028 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:14,168 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:14,289 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:14,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:45:04] 2025-10-12 19:44:18,490 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:45:04] 2025-10-12 19:44:41,894 | INFO     | PID=163094 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 12:45:04] 2025-10-12 19:44:41,894 | INFO     | .. there are 28 such processes running
[2025-10-12 12:45:04] 2025-10-12 19:44:41,894 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:45:04] 2025-10-12 19:44:41,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:45:04] 2025-10-12 19:44:41,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:45:04] 2025-10-12 19:44:57,027 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:45:04] 2025-10-12 19:44:58,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510835652416)>', '<ExcThread(monitor, started 140510274492160)>']
[2025-10-12 12:45:04] 2025-10-12 19:44:58,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:45:04] 2025-10-12 19:44:58,991 | INFO     | [monitor] control thread has ended
[2025-10-12 12:45:04] 2025-10-12 19:45:03,553 | INFO     | all workflow threads have been joined
[2025-10-12 12:45:04] 2025-10-12 19:45:03,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:45:04] 2025-10-12 19:45:03,555 | INFO     | traces error code: 0
[2025-10-12 12:45:04] 2025-10-12 19:45:03,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:45:04] 2025-10-12 19:45:03,761 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:45:04] 2025-10-12 19:45:03,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:45:04] 2025-10-12 19:45:03,774 [wrapper] pilotpid: 163094
[2025-10-12 12:45:04] 2025-10-12 19:45:03,776 [wrapper] Pilot exit status: 0
[2025-10-12 12:45:04] 2025-10-12 19:45:03,794 [wrapper] pandaids: 6840530588
[2025-10-12 12:45:04] 2025-10-12 19:45:03,851 [wrapper] cleanup supervisor_pilot  163100 163095
[2025-10-12 12:45:04] 2025-10-12 19:45:03,854 [wrapper] Test setup, not cleaning
[2025-10-12 12:45:04] 2025-10-12 19:45:03,863 [wrapper] apfmon messages muted
[2025-10-12 12:45:04] 2025-10-12 19:45:03,878 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:45:04] 2025-10-12 19:45:03,883 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:45:04]  *** Error codes and diagnostics ***
[2025-10-12 12:45:04]     "exeErrorCode": 65,
[2025-10-12 12:45:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 12:45:04]     "pilotErrorCode": 1305,
[2025-10-12 12:45:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 12:45:04]  *** Listing of results directory ***
[2025-10-12 12:45:04] total 220268
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc    557409 Oct 12 10:57 pilot3.tar.gz
[2025-10-12 12:45:04] -rwx------. 1 boinc boinc     36292 Oct 12 10:59 runpilot2-wrapper.sh
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc      5112 Oct 12 10:59 queuedata.json
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc       100 Oct 12 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:45:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 12:40 run_atlas
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc       105 Oct 12 12:40 job.xml
[2025-10-12 12:45:04] -rw-r--r--. 2 boinc boinc 221461869 Oct 12 12:40 EVNT.46676267._004380.pool.root.1
[2025-10-12 12:45:04] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:40 start_atlas.sh
[2025-10-12 12:45:04] drwxrwx--x. 2 boinc boinc      4096 Oct 12 12:40 shared
[2025-10-12 12:45:04] -rw-r--r--. 2 boinc boinc    569682 Oct 12 12:40 input.tar.gz
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc      6593 Oct 12 12:40 init_data.xml
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc         0 Oct 12 12:40 boinc_lockfile
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc      2549 Oct 12 12:40 pandaJob.out
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc    975536 Oct 12 12:40 agis_schedconf.cvmfs.json
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc   1560580 Oct 12 12:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:45:04] drwx------. 5 boinc boinc      4096 Oct 12 12:40 pilot3
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc       522 Oct 12 12:41 boinc_task_state.xml
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc       949 Oct 12 12:42 memory_monitor_summary.json
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc     21223 Oct 12 12:42 log.46676269._085513.job.log.tgz.1
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc        95 Oct 12 12:43 pilot_heartbeat.json
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc      8403 Oct 12 12:44 heartbeat.json
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc      8192 Oct 12 12:45 boinc_mmap_file
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc        22 Oct 12 12:45 wrapper_checkpoint.txt
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc      5008 Oct 12 12:45 pilotlog.txt
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc     85453 Oct 12 12:45 log.46676269._085513.job.log.1
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc       188 Oct 12 12:45 output.list
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc       620 Oct 12 12:45 runtime_log
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc    122880 Oct 12 12:45 result.tar.gz
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc      8528 Oct 12 12:45 runtime_log.err
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc       644 Oct 12 12:45 CodKDmPXFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnxkNDmZmNxjm.diag
[2025-10-12 12:45:04] -rw-r--r--. 1 boinc boinc      2138 Oct 12 12:45 stderr.txt
[2025-10-12 12:45:04] No HITS result produced
[2025-10-12 12:45:04]  *** Contents of shared directory: ***
[2025-10-12 12:45:04] total 216972
[2025-10-12 12:45:04] -rw-r--r--. 2 boinc boinc 221461869 Oct 12 12:40 ATLAS.root_0
[2025-10-12 12:45:04] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:40 start_atlas.sh
[2025-10-12 12:45:04] -rw-r--r--. 2 boinc boinc    569682 Oct 12 12:40 input.tar.gz
[2025-10-12 12:45:04] -rw-------. 1 boinc boinc    122880 Oct 12 12:45 result.tar.gz
12:45:06 (159419): run_atlas exited; CPU time 24.236779
12:45:06 (159419): called boinc_finish(0)

</stderr_txt>
]]>

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