Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:26:44 (2386792): wrapper (7.7.26015): starting
15:26:44 (2386792): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:26:44] Arguments: --nthreads 8
[2025-10-12 15:26:44] Threads: 8
[2025-10-12 15:26:44] Checking for CVMFS
[2025-10-12 15:26:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:26:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:26:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:26:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:26:46] 2.13.2.0 2698076 129680 927184 151633 1 705 25556567 32935937 57600 16776704 0 422023033 99.743 290106559 19768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:26:46] CVMFS is ok
[2025-10-12 15:26:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:26:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:26:46] Further information can be found at the LHC@home message board.
[2025-10-12 15:26:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:26:46] Checking for apptainer binary...
[2025-10-12 15:26:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:26:46] Running /usr/bin/apptainer --version
[2025-10-12 15:26:46] apptainer version 1.4.3-1.el9
[2025-10-12 15:26:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:26:47] lc-10-9.aglt2.org
[2025-10-12 15:26:47] apptainer works
[2025-10-12 15:26:47] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:26:47] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:26:47] Starting ATLAS job with PandaID=6840181926
[2025-10-12 15:26:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:48:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:48:33] 2025-10-13 00:47:19,142 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:48:33] 2025-10-13 00:47:19,143 | INFO     | sum of square deviations: 9327072859.549852
[2025-10-12 20:48:33] 2025-10-13 00:47:19,193 | INFO     | sum of deviations: 100387038475.1478
[2025-10-12 20:48:33] 2025-10-13 00:47:19,193 | INFO     | mean x: 1760306883.3376205
[2025-10-12 20:48:33] 2025-10-13 00:47:19,193 | INFO     | mean y: 2073489.389067524
[2025-10-12 20:48:33] 2025-10-13 00:47:19,193 | INFO     | -- intersect: -18944062933.759853
[2025-10-12 20:48:33] 2025-10-13 00:47:19,193 | INFO     | intersect: -18944062933.759853
[2025-10-12 20:48:33] 2025-10-13 00:47:19,194 | INFO     | chi2: 4.609682135132445
[2025-10-12 20:48:33] 2025-10-13 00:47:19,194 | INFO     | sum of square deviations: 8884426816.470547
[2025-10-12 20:48:33] 2025-10-13 00:47:19,232 | INFO     | sum of deviations: 118560210242.0392
[2025-10-12 20:48:33] 2025-10-13 00:47:19,232 | INFO     | mean x: 1760306730.8431373
[2025-10-12 20:48:33] 2025-10-13 00:47:19,232 | INFO     | mean y: 2079674.709150327
[2025-10-12 20:48:33] 2025-10-13 00:47:19,232 | INFO     | -- intersect: -23488725124.575443
[2025-10-12 20:48:33] 2025-10-13 00:47:19,232 | INFO     | intersect: -23488725124.575443
[2025-10-12 20:48:33] 2025-10-13 00:47:19,233 | INFO     | chi2: 3.840477961054668
[2025-10-12 20:48:33] 2025-10-13 00:47:19,233 | INFO     | current chi2=3.840477961054668 (change=16.68670748933703 %)
[2025-10-12 20:48:33] 2025-10-13 00:47:19,233 | INFO     | right removable region: 305
[2025-10-12 20:48:33] 2025-10-13 00:47:19,274 | INFO     | sum of square deviations: 8884362766.470547
[2025-10-12 20:48:33] 2025-10-13 00:47:19,277 | INFO     | sum of deviations: 29210236838.70592
[2025-10-12 20:48:33] 2025-10-13 00:47:19,277 | INFO     | mean x: 1760307035.8431373
[2025-10-12 20:48:33] 2025-10-13 00:47:19,277 | INFO     | mean y: 2097960.098039216
[2025-10-12 20:48:33] 2025-10-13 00:47:19,277 | INFO     | -- intersect: -5785484872.502282
[2025-10-12 20:48:33] 2025-10-13 00:47:19,277 | INFO     | intersect: -5785484872.502282
[2025-10-12 20:48:33] 2025-10-13 00:47:19,277 | INFO     | chi2: 1.7521025405150448
[2025-10-12 20:48:33] 2025-10-13 00:47:19,278 | INFO     | current chi2=1.7521025405150448 (change=61.99081652156687 %)
[2025-10-12 20:48:33] 2025-10-13 00:47:19,342 | INFO     | sum of square deviations: 8455922829.754189
[2025-10-12 20:48:33] 2025-10-13 00:47:19,344 | INFO     | sum of deviations: -5071749833.16943
[2025-10-12 20:48:33] 2025-10-13 00:47:19,345 | INFO     | mean x: 1760307188.3421926
[2025-10-12 20:48:33] 2025-10-13 00:47:19,345 | INFO     | mean y: 2110152.438538206
[2025-10-12 20:48:33] 2025-10-13 00:47:19,345 | INFO     | -- intersect: 1057918946.8833894
[2025-10-12 20:48:33] 2025-10-13 00:47:19,345 | INFO     | intersect: 1057918946.8833894
[2025-10-12 20:48:33] 2025-10-13 00:47:19,345 | INFO     | chi2: 1.1298757787123845
[2025-10-12 20:48:33] 2025-10-13 00:47:19,345 | INFO     | current chi2=1.1298757787123845 (change=35.51314762774966 %)
[2025-10-12 20:48:33] 2025-10-13 00:47:19,391 | INFO     | sum of square deviations: 8041446434.158797
[2025-10-12 20:48:33] 2025-10-13 00:47:19,393 | INFO     | sum of deviations: -19704750340.854736
[2025-10-12 20:48:33] 2025-10-13 00:47:19,394 | INFO     | mean x: 1760307340.8479729
[2025-10-12 20:48:33] 2025-10-13 00:47:19,394 | INFO     | mean y: 2115529.1587837837
[2025-10-12 20:48:33] 2025-10-13 00:47:19,394 | INFO     | -- intersect: 4315570447.821272
[2025-10-12 20:48:33] 2025-10-13 00:47:19,394 | INFO     | intersect: 4315570447.821272
[2025-10-12 20:48:33] 2025-10-13 00:47:19,394 | INFO     | chi2: 0.996315191065992
[2025-10-12 20:48:33] 2025-10-13 00:47:19,394 | INFO     | current chi2=0.996315191065992 (change=11.820820497506308 %)
[2025-10-12 20:48:33] 2025-10-13 00:47:19,394 | INFO     | left removable region: 30
[2025-10-12 20:48:33] 2025-10-13 00:47:19,465 | INFO     | sum of square deviations: 6448479802.487261
[2025-10-12 20:48:33] 2025-10-13 00:47:19,467 | INFO     | sum of deviations: 7681656311.229089
[2025-10-12 20:48:33] 2025-10-13 00:47:19,467 | INFO     | mean x: 1760307615.3490908
[2025-10-12 20:48:33] 2025-10-13 00:47:19,467 | INFO     | mean y: 2119153.7163636363
[2025-10-12 20:48:33] 2025-10-13 00:47:19,467 | INFO     | -- intersect: -2094821290.7485988
[2025-10-12 20:48:33] 2025-10-13 00:47:19,467 | INFO     | intersect: -2094821290.7485988
[2025-10-12 20:48:33] 2025-10-13 00:47:19,468 | INFO     | chi2: 0.1738192805957535
[2025-10-12 20:48:33] 2025-10-13 00:47:19,468 | INFO     | -- intersect: -2094821290.7485988
[2025-10-12 20:48:33] 2025-10-13 00:47:19,468 | INFO     | current memory leak: 1.19 B/s (using 275 data points, chi2=0.17)
[2025-10-12 20:48:33] 2025-10-13 00:47:19,469 | INFO     | could have reported an average CPU frequency of 2732 MHz (14 samples)
[2025-10-12 20:48:33] 2025-10-13 00:47:19,515 | INFO     | ..............................
[2025-10-12 20:48:33] 2025-10-13 00:47:19,515 | INFO     | . Timing measurements:
[2025-10-12 20:48:33] 2025-10-13 00:47:19,515 | INFO     | . get job = 0 s
[2025-10-12 20:48:33] 2025-10-13 00:47:19,515 | INFO     | . initial setup = 5 s
[2025-10-12 20:48:33] 2025-10-13 00:47:19,515 | INFO     | . payload setup = 47 s
[2025-10-12 20:48:33] 2025-10-13 00:47:19,515 | INFO     | . stage-in = 0 s
[2025-10-12 20:48:33] 2025-10-13 00:47:19,515 | INFO     | . payload execution = 18988 s
[2025-10-12 20:48:33] 2025-10-13 00:47:19,516 | INFO     | . stage-out = 7 s
[2025-10-12 20:48:33] 2025-10-13 00:47:19,516 | INFO     | . log creation = 0 s
[2025-10-12 20:48:33] 2025-10-13 00:47:19,516 | INFO     | ..............................
[2025-10-12 20:48:33] 2025-10-13 00:47:19,970 | INFO     | time since job start (19171s) is within the limit (172800.0s)
[2025-10-12 20:48:33] 2025-10-13 00:47:20,329 | INFO     | 
[2025-10-12 20:48:33] 2025-10-13 00:47:20,329 | INFO     | job summary report
[2025-10-12 20:48:33] 2025-10-13 00:47:20,329 | INFO     | --------------------------------------------------
[2025-10-12 20:48:33] 2025-10-13 00:47:20,329 | INFO     | PanDA job id: 6840181926
[2025-10-12 20:48:33] 2025-10-13 00:47:20,329 | INFO     | task id: 46676269
[2025-10-12 20:48:33] 2025-10-13 00:47:20,329 | INFO     | errors: (none)
[2025-10-12 20:48:33] 2025-10-13 00:47:20,329 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | pilot state: finished 
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | transexitcode: 0
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | exeerrorcode: 0
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | exeerrordiag: 
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | exitcode: 0
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | exitmsg: OK
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | cpuconsumptiontime: 41394 s
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | nevents: 400
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | neventsw: 0
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | pid: 2415758
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | pgrp: 2415758
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | corecount: 8
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | event service: False
[2025-10-12 20:48:33] 2025-10-13 00:47:20,330 | INFO     | sizes: {0: 2348685, 1: 2348713, 2: 2348912, 14: 2348912, 25: 2348940, 36: 2348968, 39: 2349386, 47: 2349414, 19040: 2381912, 19041: 2381911, 19050: 2390993, 19051:
[2025-10-12 20:48:33] 2025-10-13 00:47:20,331 | INFO     | --------------------------------------------------
[2025-10-12 20:48:33] 2025-10-13 00:47:20,331 | INFO     | 
[2025-10-12 20:48:33] 2025-10-13 00:47:20,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 20:48:33] 2025-10-13 00:47:20,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:48:33] 2025-10-13 00:47:20,695 | INFO     | job 6840181926 has completed (purged errors)
[2025-10-12 20:48:33] 2025-10-13 00:47:20,695 | INFO     | overall cleanup function is called
[2025-10-12 20:48:33] 2025-10-13 00:47:21,720 | INFO     | --- collectZombieJob: --- 10, [2415758]
[2025-10-12 20:48:33] 2025-10-13 00:47:21,720 | INFO     | zombie collector waiting for pid 2415758
[2025-10-12 20:48:33] 2025-10-13 00:47:21,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:48:33] 2025-10-13 00:47:21,720 | INFO     | collected zombie processes
[2025-10-12 20:48:33] 2025-10-13 00:47:21,720 | INFO     | will attempt to kill all subprocesses of pid=2415758
[2025-10-12 20:48:33] 2025-10-13 00:47:27,256 | INFO     | PID=2396598 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:48:33] 2025-10-13 00:47:27,258 | INFO     | .. there are 75 such processes running
[2025-10-12 20:48:33] 2025-10-13 00:47:27,382 | INFO     | process IDs to be killed: [2415758] (in reverse order)
[2025-10-12 20:48:33] 2025-10-13 00:47:27,699 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:48:33] 2025-10-13 00:47:27,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:48:33] 2025-10-13 00:47:27,731 | INFO     | did not find any defunct processes belonging to 2415758
[2025-10-12 20:48:33] 2025-10-13 00:47:27,756 | INFO     | did not find any defunct processes belonging to 2415758
[2025-10-12 20:48:33] 2025-10-13 00:47:27,756 | INFO     | ready for new job
[2025-10-12 20:48:33] 2025-10-13 00:47:27,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:48:33] 2025-10-13 00:47:27,759 | INFO     | ***************************************
[2025-10-12 20:48:33] 2025-10-13 00:47:27,759 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:48:33] 2025-10-13 00:47:27,759 | INFO     | ***************************************
[2025-10-12 20:48:33] 2025-10-13 00:47:27,759 | INFO     | 
[2025-10-12 20:48:33] 2025-10-13 00:47:27,803 | INFO     | architecture information:
[2025-10-12 20:48:33] 2025-10-13 00:47:27,814 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:48:33] 2025-10-13 00:47:27,863 | INFO     | cat /etc/os-release:
[2025-10-12 20:48:33] NAME="CentOS Linux"
[2025-10-12 20:48:33] VERSION="7 (Core)"
[2025-10-12 20:48:33] ID="centos"
[2025-10-12 20:48:33] ID_LIKE="rhel fedora"
[2025-10-12 20:48:33] VERSION_ID="7"
[2025-10-12 20:48:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:48:33] ANSI_COLOR="0;31"
[2025-10-12 20:48:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:48:33] HOME_URL="https://www.centos.org/"
[2025-10-12 20:48:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:48:33] 
[2025-10-12 20:48:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:48:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:48:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:48:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:48:33] 
[2025-10-12 20:48:33] 2025-10-13 00:47:27,863 | INFO     | ***************************************
[2025-10-12 20:48:33] 2025-10-13 00:47:28,366 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 20:48:33] 2025-10-13 00:47:28,547 | INFO     | sufficient remaining disk space (94315216896 B)
[2025-10-12 20:48:33] 2025-10-13 00:47:28,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:48:33] 2025-10-13 00:47:28,548 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:48:33] 2025-10-13 00:47:28,548 | INFO     | update_server=False
[2025-10-12 20:48:33] 2025-10-13 00:47:28,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:48:33] 2025-10-13 00:47:28,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:48:33] 2025-10-13 00:47:28,548 | INFO     | aborting loop
[2025-10-12 20:48:33] 2025-10-13 00:47:28,646 | INFO     | all job control threads have been joined
[2025-10-12 20:48:33] 2025-10-13 00:47:29,005 | INFO     | all payload control threads have been joined
[2025-10-12 20:48:33] 2025-10-13 00:47:29,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:48:33] 2025-10-13 00:47:29,554 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:29,555 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:29,593 | INFO     | all data control threads have been joined
[2025-10-12 20:48:33] 2025-10-13 00:47:29,630 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:29,655 | INFO     | [job] control thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:29,775 | INFO     | [job] validate thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:29,775 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:29,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:48:33] 2025-10-13 00:47:30,002 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:30,010 | INFO     | [payload] control thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:30,270 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:30,412 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:30,412 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:30,511 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:30,525 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:30,599 | INFO     | [data] control thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:31,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:48:33] 2025-10-13 00:47:31,946 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:47:35,305 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:48:33] 2025-10-13 00:48:01,234 | INFO     | PID=2396598 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:48:33] 2025-10-13 00:48:01,235 | INFO     | .. there are 76 such processes running
[2025-10-12 20:48:33] 2025-10-13 00:48:01,235 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:48:33] 2025-10-13 00:48:01,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:48:33] 2025-10-13 00:48:01,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:48:33] 2025-10-13 00:48:23,410 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:48:33] 2025-10-13 00:48:25,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949118564160)>', '<ExcThread(monitor, started 139948845930240)>']
[2025-10-12 20:48:33] 2025-10-13 00:48:25,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:48:33] 2025-10-13 00:48:25,444 | INFO     | [monitor] control thread has ended
[2025-10-12 20:48:33] 2025-10-13 00:48:30,473 | INFO     | all workflow threads have been joined
[2025-10-12 20:48:33] 2025-10-13 00:48:30,473 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:48:33] 2025-10-13 00:48:30,473 | INFO     | traces error code: 0
[2025-10-12 20:48:33] 2025-10-13 00:48:30,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:48:33] 2025-10-13 00:48:31,608 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:48:33] 2025-10-13 00:48:31,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:48:33] 2025-10-13 00:48:31,653 [wrapper] pilotpid: 2396598
[2025-10-12 20:48:33] 2025-10-13 00:48:31,671 [wrapper] Pilot exit status: 0
[2025-10-12 20:48:33] 2025-10-13 00:48:31,727 [wrapper] pandaids: 6840181926
[2025-10-12 20:48:33] 2025-10-13 00:48:31,955 [wrapper] cleanup supervisor_pilot 4011726 2396599
[2025-10-12 20:48:33] 2025-10-13 00:48:32,003 [wrapper] Test setup, not cleaning
[2025-10-12 20:48:33] 2025-10-13 00:48:32,027 [wrapper] apfmon messages muted
[2025-10-12 20:48:33] 2025-10-13 00:48:32,060 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:48:33] 2025-10-13 00:48:32,074 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:48:33]  *** Error codes and diagnostics ***
[2025-10-12 20:48:33]     "exeErrorCode": 0,
[2025-10-12 20:48:33]     "exeErrorDiag": "",
[2025-10-12 20:48:33]     "pilotErrorCode": 0,
[2025-10-12 20:48:33]     "pilotErrorDiag": "",
[2025-10-12 20:48:33]  *** Listing of results directory ***
[2025-10-12 20:48:33] total 413824
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:31 queuedata.json
[2025-10-12 20:48:33] -rwx------. 1 boincer umatlas     36292 Oct 12 10:32 runpilot2-wrapper.sh
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:48:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:26 run_atlas
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:26 job.xml
[2025-10-12 20:48:33] -rw-r--r--. 2 boincer umatlas 220342459 Oct 12 15:26 EVNT.46676267._004243.pool.root.1
[2025-10-12 20:48:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:26 start_atlas.sh
[2025-10-12 20:48:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:26 shared
[2025-10-12 20:48:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:26 input.tar.gz
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:26 boinc_lockfile
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 15:26 pandaJob.out
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas    975528 Oct 12 15:27 agis_schedconf.cvmfs.json
[2025-10-12 20:48:33] drwx------. 5 boincer umatlas      4096 Oct 12 15:27 pilot3
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas 194135223 Oct 12 20:44 HITS.46676269._080791.pool.root.1
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas       531 Oct 12 20:44 boinc_task_state.xml
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas      6865 Oct 12 20:45 init_data.xml
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas      1044 Oct 12 20:46 memory_monitor_summary.json
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas    493474 Oct 12 20:46 log.46676269._080791.job.log.tgz.1
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas        95 Oct 12 20:47 pilot_heartbeat.json
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas      7830 Oct 12 20:47 heartbeat.json
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:48 boinc_mmap_file
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas        28 Oct 12 20:48 wrapper_checkpoint.txt
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas      4824 Oct 12 20:48 pilotlog.txt
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas   2194850 Oct 12 20:48 log.46676269._080791.job.log.1
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas       357 Oct 12 20:48 output.list
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:48 runtime_log
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas   2703360 Oct 12 20:48 result.tar.gz
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas       654 Oct 12 20:48 VYiNDmNICS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmy6TMDmtFJUgn.diag
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 20:48 runtime_log.err
[2025-10-12 20:48:33] -rw-r--r--. 1 boincer umatlas     21168 Oct 12 20:48 stderr.txt
[2025-10-12 20:48:33] HITS file was successfully produced:
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas 194135223 Oct 12 20:44 shared/HITS.pool.root.1
[2025-10-12 20:48:33]  *** Contents of shared directory: ***
[2025-10-12 20:48:33] total 407992
[2025-10-12 20:48:33] -rw-r--r--. 2 boincer umatlas 220342459 Oct 12 15:26 ATLAS.root_0
[2025-10-12 20:48:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:26 start_atlas.sh
[2025-10-12 20:48:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:26 input.tar.gz
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas 194135223 Oct 12 20:44 HITS.pool.root.1
[2025-10-12 20:48:33] -rw-------. 1 boincer umatlas   2703360 Oct 12 20:48 result.tar.gz
20:48:35 (2386792): run_atlas exited; CPU time 42512.465550
20:48:35 (2386792): called boinc_finish(0)

</stderr_txt>
]]>

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