Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:02:48 (2404920): wrapper (7.7.26015): starting
16:02:48 (2404920): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:02:48] Arguments: --nthreads 8
[2025-10-12 16:02:48] Threads: 8
[2025-10-12 16:02:48] Checking for CVMFS
[2025-10-12 16:02:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:02:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:02:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:02:51] 2.13.2.0 5068 6134 133040 151635 1 335 26472949 40960000 25737 16776704 0 23097153 99.786 14133801 37221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:02:51] CVMFS is ok
[2025-10-12 16:02:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:02:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:02:51] Further information can be found at the LHC@home message board.
[2025-10-12 16:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:02:51] Checking for apptainer binary...
[2025-10-12 16:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:02:51] Running /usr/bin/apptainer --version
[2025-10-12 16:02:51] apptainer version 1.4.3-1.el9
[2025-10-12 16:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:02:52] c-212-15.aglt2.org
[2025-10-12 16:02:52] apptainer works
[2025-10-12 16:02:52] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:02:52] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:02:52] Starting ATLAS job with PandaID=6840225668
[2025-10-12 16:02:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:29:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:29:37] 2025-10-13 01:28:39,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:29:37] 2025-10-13 01:28:39,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:29:37] 2025-10-13 01:28:39,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:29:37] 2025-10-13 01:28:39,807 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:29:37] 2025-10-13 01:28:39,807 | INFO     | sum of square deviations: 9972184004.30183
[2025-10-12 21:29:37] 2025-10-13 01:28:39,810 | INFO     | sum of deviations: 236347917665.8869
[2025-10-12 21:29:37] 2025-10-13 01:28:39,810 | INFO     | mean x: 1760309207.7924528
[2025-10-12 21:29:37] 2025-10-13 01:28:39,810 | INFO     | mean y: 2409649.1194968554
[2025-10-12 21:29:37] 2025-10-13 01:28:39,810 | INFO     | -- intersect: -41718181901.373184
[2025-10-12 21:29:37] 2025-10-13 01:28:39,810 | INFO     | intersect: -41718181901.373184
[2025-10-12 21:29:37] 2025-10-13 01:28:39,816 | INFO     | chi2: 5.575466618091531
[2025-10-12 21:29:37] 2025-10-13 01:28:39,817 | INFO     | sum of square deviations: 9509178966.543186
[2025-10-12 21:29:37] 2025-10-13 01:28:39,821 | INFO     | sum of deviations: 253413876423.86905
[2025-10-12 21:29:37] 2025-10-13 01:28:39,821 | INFO     | mean x: 1760309055.2907348
[2025-10-12 21:29:37] 2025-10-13 01:28:39,821 | INFO     | mean y: 2415181.265175719
[2025-10-12 21:29:37] 2025-10-13 01:28:39,821 | INFO     | -- intersect: -46908758009.896996
[2025-10-12 21:29:37] 2025-10-13 01:28:39,821 | INFO     | intersect: -46908758009.896996
[2025-10-12 21:29:37] 2025-10-13 01:28:39,822 | INFO     | chi2: 4.787881597552765
[2025-10-12 21:29:37] 2025-10-13 01:28:39,822 | INFO     | current chi2=4.787881597552765 (change=14.125903255938688 %)
[2025-10-12 21:29:37] 2025-10-13 01:28:39,822 | INFO     | right removable region: 312
[2025-10-12 21:29:37] 2025-10-13 01:28:39,822 | INFO     | sum of square deviations: 9509160911.36736
[2025-10-12 21:29:37] 2025-10-13 01:28:39,826 | INFO     | sum of deviations: 146058335481.03186
[2025-10-12 21:29:37] 2025-10-13 01:28:39,826 | INFO     | mean x: 1760309360.2971246
[2025-10-12 21:29:37] 2025-10-13 01:28:39,826 | INFO     | mean y: 2439347.591054313
[2025-10-12 21:29:37] 2025-10-13 01:28:39,826 | INFO     | -- intersect: -27035472566.311714
[2025-10-12 21:29:37] 2025-10-13 01:28:39,826 | INFO     | intersect: -27035472566.311714
[2025-10-12 21:29:37] 2025-10-13 01:28:39,827 | INFO     | chi2: 2.4580187871379584
[2025-10-12 21:29:37] 2025-10-13 01:28:39,827 | INFO     | current chi2=2.4580187871379584 (change=55.91366686400622 %)
[2025-10-12 21:29:37] 2025-10-13 01:28:39,827 | INFO     | sum of square deviations: 9060696230.918844
[2025-10-12 21:29:37] 2025-10-13 01:28:39,830 | INFO     | sum of deviations: 93652728749.9805
[2025-10-12 21:29:37] 2025-10-13 01:28:39,830 | INFO     | mean x: 1760309512.801948
[2025-10-12 21:29:37] 2025-10-13 01:28:39,830 | INFO     | mean y: 2457115.0324675324
[2025-10-12 21:29:37] 2025-10-13 01:28:39,830 | INFO     | -- intersect: -18192368659.601517
[2025-10-12 21:29:37] 2025-10-13 01:28:39,831 | INFO     | intersect: -18192368659.601517
[2025-10-12 21:29:37] 2025-10-13 01:28:39,831 | INFO     | chi2: 1.4146312042785945
[2025-10-12 21:29:37] 2025-10-13 01:28:39,831 | INFO     | current chi2=1.4146312042785945 (change=42.4483160307433 %)
[2025-10-12 21:29:37] 2025-10-13 01:28:39,832 | INFO     | sum of square deviations: 8626557400.455442
[2025-10-12 21:29:37] 2025-10-13 01:28:39,834 | INFO     | sum of deviations: 63293197328.19808
[2025-10-12 21:29:37] 2025-10-13 01:28:39,834 | INFO     | mean x: 1760309665.3069308
[2025-10-12 21:29:37] 2025-10-13 01:28:39,835 | INFO     | mean y: 2467777.191419142
[2025-10-12 21:29:37] 2025-10-13 01:28:39,835 | INFO     | -- intersect: -12912953964.408962
[2025-10-12 21:29:37] 2025-10-13 01:28:39,835 | INFO     | intersect: -12912953964.408962
[2025-10-12 21:29:37] 2025-10-13 01:28:39,835 | INFO     | chi2: 1.1268129659866417
[2025-10-12 21:29:37] 2025-10-13 01:28:39,835 | INFO     | current chi2=1.1268129659866417 (change=20.34581433107356 %)
[2025-10-12 21:29:37] 2025-10-13 01:28:39,835 | INFO     | left removable region: 30
[2025-10-12 21:29:37] 2025-10-13 01:28:39,836 | INFO     | sum of square deviations: 6954379799.776627
[2025-10-12 21:29:37] 2025-10-13 01:28:39,838 | INFO     | sum of deviations: 36690671760.042564
[2025-10-12 21:29:37] 2025-10-13 01:28:39,839 | INFO     | mean x: 1760309939.819149
[2025-10-12 21:29:37] 2025-10-13 01:28:39,839 | INFO     | mean y: 2492050.510638298
[2025-10-12 21:29:37] 2025-10-13 01:28:39,839 | INFO     | -- intersect: -9284742189.97752
[2025-10-12 21:29:37] 2025-10-13 01:28:39,839 | INFO     | intersect: -9284742189.97752
[2025-10-12 21:29:37] 2025-10-13 01:28:39,839 | INFO     | chi2: 0.10551765586197503
[2025-10-12 21:29:37] 2025-10-13 01:28:39,840 | INFO     | -- intersect: -9284742189.97752
[2025-10-12 21:29:37] 2025-10-13 01:28:39,840 | INFO     | current memory leak: 5.28 B/s (using 282 data points, chi2=0.11)
[2025-10-12 21:29:37] 2025-10-13 01:28:39,840 | INFO     | could have reported an average CPU frequency of 3084 MHz (14 samples)
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | ..............................
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . Timing measurements:
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . get job = 0 s
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . initial setup = 5 s
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . payload setup = 31 s
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . stage-in = 0 s
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . payload execution = 19388 s
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . stage-out = 4 s
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | . log creation = 0 s
[2025-10-12 21:29:37] 2025-10-13 01:28:39,841 | INFO     | ..............................
[2025-10-12 21:29:37] 2025-10-13 01:28:40,242 | INFO     | 
[2025-10-12 21:29:37] 2025-10-13 01:28:40,243 | INFO     | job summary report
[2025-10-12 21:29:37] 2025-10-13 01:28:40,243 | INFO     | --------------------------------------------------
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | PanDA job id: 6840225668
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | task id: 46676269
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | errors: (none)
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | pilot state: finished 
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | transexitcode: 0
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | exeerrorcode: 0
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | exeerrordiag: 
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | exitcode: 0
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | exitmsg: OK
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | cpuconsumptiontime: 37476 s
[2025-10-12 21:29:37] 2025-10-13 01:28:40,244 | INFO     | nevents: 400
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | neventsw: 0
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | pid: 2418827
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | pgrp: 2418827
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | corecount: 8
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | event service: False
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | sizes: {0: 2348028, 1: 2348629, 2: 2348741, 3: 2348940, 14: 2348940, 25: 2349386, 19422: 2382566, 19427: 2391620, 19437: 2391758}
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | --------------------------------------------------
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | 
[2025-10-12 21:29:37] 2025-10-13 01:28:40,245 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 21:29:37] 2025-10-13 01:28:40,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:29:37] 2025-10-13 01:28:40,347 | INFO     | job 6840225668 has completed (purged errors)
[2025-10-12 21:29:37] 2025-10-13 01:28:40,347 | INFO     | overall cleanup function is called
[2025-10-12 21:29:37] 2025-10-13 01:28:41,396 | INFO     | --- collectZombieJob: --- 10, [2418827]
[2025-10-12 21:29:37] 2025-10-13 01:28:41,396 | INFO     | zombie collector waiting for pid 2418827
[2025-10-12 21:29:37] 2025-10-13 01:28:41,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:29:37] 2025-10-13 01:28:41,396 | INFO     | collected zombie processes
[2025-10-12 21:29:37] 2025-10-13 01:28:41,396 | INFO     | will attempt to kill all subprocesses of pid=2418827
[2025-10-12 21:29:37] 2025-10-13 01:28:42,006 | INFO     | process IDs to be killed: [2418827] (in reverse order)
[2025-10-12 21:29:37] 2025-10-13 01:28:42,196 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:29:37] 2025-10-13 01:28:42,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:29:37] 2025-10-13 01:28:42,219 | INFO     | did not find any defunct processes belonging to 2418827
[2025-10-12 21:29:37] 2025-10-13 01:28:42,239 | INFO     | did not find any defunct processes belonging to 2418827
[2025-10-12 21:29:37] 2025-10-13 01:28:42,240 | INFO     | ready for new job
[2025-10-12 21:29:37] 2025-10-13 01:28:42,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:29:37] 2025-10-13 01:28:42,243 | INFO     | ***************************************
[2025-10-12 21:29:37] 2025-10-13 01:28:42,243 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:29:37] 2025-10-13 01:28:42,243 | INFO     | ***************************************
[2025-10-12 21:29:37] 2025-10-13 01:28:42,243 | INFO     | 
[2025-10-12 21:29:37] 2025-10-13 01:28:42,249 | INFO     | architecture information:
[2025-10-12 21:29:37] 2025-10-13 01:28:42,250 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:29:37] 2025-10-13 01:28:42,278 | INFO     | cat /etc/os-release:
[2025-10-12 21:29:37] NAME="CentOS Linux"
[2025-10-12 21:29:37] VERSION="7 (Core)"
[2025-10-12 21:29:37] ID="centos"
[2025-10-12 21:29:37] ID_LIKE="rhel fedora"
[2025-10-12 21:29:37] VERSION_ID="7"
[2025-10-12 21:29:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:29:37] ANSI_COLOR="0;31"
[2025-10-12 21:29:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:29:37] HOME_URL="https://www.centos.org/"
[2025-10-12 21:29:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:29:37] 
[2025-10-12 21:29:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:29:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:29:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:29:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:29:37] 
[2025-10-12 21:29:37] 2025-10-13 01:28:42,279 | INFO     | ***************************************
[2025-10-12 21:29:37] 2025-10-13 01:28:42,783 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 21:29:37] 2025-10-13 01:28:42,820 | INFO     | sufficient remaining disk space (127750111232 B)
[2025-10-12 21:29:37] 2025-10-13 01:28:42,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:29:37] 2025-10-13 01:28:42,821 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:29:37] 2025-10-13 01:28:42,821 | INFO     | update_server=False
[2025-10-12 21:29:37] 2025-10-13 01:28:42,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:29:37] 2025-10-13 01:28:42,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:29:37] 2025-10-13 01:28:42,821 | INFO     | aborting loop
[2025-10-12 21:29:37] 2025-10-13 01:28:43,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:29:37] 2025-10-13 01:28:43,155 | INFO     | all payload control threads have been joined
[2025-10-12 21:29:37] 2025-10-13 01:28:43,183 | INFO     | all job control threads have been joined
[2025-10-12 21:29:37] 2025-10-13 01:28:43,723 | INFO     | all data control threads have been joined
[2025-10-12 21:29:37] 2025-10-13 01:28:43,827 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:43,828 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:43,878 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,077 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,161 | INFO     | [payload] control thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,177 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,190 | INFO     | [job] control thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,190 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,490 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,712 | INFO     | [job] validate thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,729 | INFO     | [data] control thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,839 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:44,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:29:37] 2025-10-13 01:28:44,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:45,024 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:45,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:29:37] 2025-10-13 01:28:45,952 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:28:49,123 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:29:37] 2025-10-13 01:29:13,131 | INFO     | PID=2410393 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:29:37] 2025-10-13 01:29:13,131 | INFO     | .. there are 24 such processes running
[2025-10-12 21:29:37] 2025-10-13 01:29:13,132 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:29:37] 2025-10-13 01:29:13,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:29:37] 2025-10-13 01:29:13,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:29:37] 2025-10-13 01:29:31,183 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:29:37] 2025-10-13 01:29:31,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520758282048)>', '<ExcThread(monitor, started 140520038848256)>']
[2025-10-12 21:29:37] 2025-10-13 01:29:31,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:29:37] 2025-10-13 01:29:31,240 | INFO     | [monitor] control thread has ended
[2025-10-12 21:29:37] 2025-10-13 01:29:36,244 | INFO     | all workflow threads have been joined
[2025-10-12 21:29:37] 2025-10-13 01:29:36,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:29:37] 2025-10-13 01:29:36,244 | INFO     | traces error code: 0
[2025-10-12 21:29:37] 2025-10-13 01:29:36,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:29:37] 2025-10-13 01:29:36,488 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:29:37] 2025-10-13 01:29:36,497 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:29:37] 2025-10-13 01:29:36,500 [wrapper] pilotpid: 2410393
[2025-10-12 21:29:37] 2025-10-13 01:29:36,503 [wrapper] Pilot exit status: 0
[2025-10-12 21:29:37] 2025-10-13 01:29:36,632 [wrapper] pandaids: 6840225668
[2025-10-12 21:29:37] 2025-10-13 01:29:36,780 [wrapper] cleanup supervisor_pilot 3336522 2410394
[2025-10-12 21:29:37] 2025-10-13 01:29:36,821 [wrapper] Test setup, not cleaning
[2025-10-12 21:29:37] 2025-10-13 01:29:36,862 [wrapper] apfmon messages muted
[2025-10-12 21:29:37] 2025-10-13 01:29:36,886 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:29:37] 2025-10-13 01:29:36,901 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:29:37]  *** Error codes and diagnostics ***
[2025-10-12 21:29:37]     "exeErrorCode": 0,
[2025-10-12 21:29:37]     "exeErrorDiag": "",
[2025-10-12 21:29:37]     "pilotErrorCode": 0,
[2025-10-12 21:29:37]     "pilotErrorDiag": "",
[2025-10-12 21:29:37]  *** Listing of results directory ***
[2025-10-12 21:29:37] total 424624
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:51 queuedata.json
[2025-10-12 21:29:37] -rwx------. 1 boincer umatlas     36292 Oct 12 11:51 runpilot2-wrapper.sh
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:29:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:02 run_atlas
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:02 job.xml
[2025-10-12 21:29:37] -rw-r--r--. 2 boincer umatlas 223383259 Oct 12 16:02 EVNT.46676267._004591.pool.root.1
[2025-10-12 21:29:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:02 shared
[2025-10-12 21:29:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 16:02 input.tar.gz
[2025-10-12 21:29:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:02 start_atlas.sh
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:02 boinc_lockfile
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 16:02 pandaJob.out
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas    975536 Oct 12 16:03 agis_schedconf.cvmfs.json
[2025-10-12 21:29:37] drwx------. 5 boincer umatlas      4096 Oct 12 16:03 pilot3
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas      6947 Oct 12 21:21 init_data.xml
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas 201356584 Oct 12 21:27 HITS.46676269._082735.pool.root.1
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas       530 Oct 12 21:27 boinc_task_state.xml
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas      1055 Oct 12 21:28 memory_monitor_summary.json
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas        95 Oct 12 21:28 pilot_heartbeat.json
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas    541501 Oct 12 21:28 log.46676269._082735.job.log.tgz.1
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas      7814 Oct 12 21:28 heartbeat.json
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:29 boinc_mmap_file
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:29 wrapper_checkpoint.txt
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas      4825 Oct 12 21:29 pilotlog.txt
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas   2543548 Oct 12 21:29 log.46676269._082735.job.log.1
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas       357 Oct 12 21:29 output.list
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:29 runtime_log
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas   3102720 Oct 12 21:29 result.tar.gz
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 21:29 runtime_log.err
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas       661 Oct 12 21:29 OXiKDmWXDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJMUMDmxBfmwm.diag
[2025-10-12 21:29:37] -rw-r--r--. 1 boincer umatlas     20988 Oct 12 21:29 stderr.txt
[2025-10-12 21:29:37] HITS file was successfully produced:
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas 201356584 Oct 12 21:27 shared/HITS.pool.root.1
[2025-10-12 21:29:37]  *** Contents of shared directory: ***
[2025-10-12 21:29:37] total 418404
[2025-10-12 21:29:37] -rw-r--r--. 2 boincer umatlas 223383259 Oct 12 16:02 ATLAS.root_0
[2025-10-12 21:29:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 16:02 input.tar.gz
[2025-10-12 21:29:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:02 start_atlas.sh
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas 201356584 Oct 12 21:27 HITS.pool.root.1
[2025-10-12 21:29:37] -rw-------. 1 boincer umatlas   3102720 Oct 12 21:29 result.tar.gz
21:29:39 (2404920): run_atlas exited; CPU time 38148.574532
21:29:39 (2404920): called boinc_finish(0)

</stderr_txt>
]]>

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