Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:37:11 (147983): wrapper (7.7.26015): starting
07:37:11 (147983): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 07:37:11] Arguments: --nthreads 6
[2025-10-13 07:37:11] Threads: 6
[2025-10-13 07:37:11] Checking for CVMFS
[2025-10-13 07:37:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:37:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:37:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:37:11] 2.11.5.0 3651556 4908 73184 151640 0 188 38792168 52428801 1858 130560 0 15421378 99.998 169902 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 07:37:11] CVMFS is ok
[2025-10-13 07:37:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:37:11] Checking for apptainer binary...
[2025-10-13 07:37:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:37:11] Running /usr/bin/apptainer --version
[2025-10-13 07:37:11] apptainer version 1.3.5-1.el9
[2025-10-13 07:37:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:37:11] testio008
[2025-10-13 07:37:11] apptainer works
[2025-10-13 07:37:11] Set ATHENA_PROC_NUMBER=6
[2025-10-13 07:37:11] Set ATHENA_CORE_NUMBER=6
[2025-10-13 07:37:11] Starting ATLAS job with PandaID=6829492484
[2025-10-13 07:37:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:03:36]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:03:36]  protocol_id=None
[2025-10-13 09:03:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 09:03:36]  replicas=None
[2025-10-13 09:03:36]  scope=mc23_13p6TeV
[2025-10-13 09:03:36]  status=None
[2025-10-13 09:03:36]  status_code=0
[2025-10-13 09:03:36]  storage_token=
[2025-10-13 09:03:36]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6829492484/log.46373048._096624.job.log.tgz.1
[2025-10-13 09:03:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/08/log.46373048._096624.job.log.tgz.1
[2025-10-13 09:03:36]  workdir=None
[2025-10-13 09:03:36] ]
[2025-10-13 09:03:36] 2025-10-13 00:02:57,274 | INFO     | transferring file log.46373048._096624.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6829492484/log.46373048._096624.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 09:03:36] 2025-10-13 00:02:57,275 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6829492484/log.46373048._096624.job.log.tgz.1 /var/lib/boinc/slots/2/log.46373048._096624.job
[2025-10-13 09:03:36] 2025-10-13 00:02:57,282 | INFO     | adding to output.list: log.46373048._096624.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/08/log.46373048._096624.job.log.tg
[2025-10-13 09:03:36] 2025-10-13 00:02:57,283 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 09:03:36] 2025-10-13 00:02:57,283 | INFO     | summary of transferred files:
[2025-10-13 09:03:36] 2025-10-13 00:02:57,283 | INFO     |  -- lfn=log.46373048._096624.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 09:03:36] 2025-10-13 00:02:57,283 | INFO     | stage-out finished correctly
[2025-10-13 09:03:36] 2025-10-13 00:02:58,501 | INFO     | monitor loop #381: job 0:6829492484 is in state 'finished'
[2025-10-13 09:03:36] 2025-10-13 00:02:58,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:03:36] 2025-10-13 00:02:58,854 | INFO     | time since job start (5138s) is within the limit (172800.0s)
[2025-10-13 09:03:36] 2025-10-13 00:03:00,200 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 09:03:36] 2025-10-13 00:03:00,859 | INFO     | time since job start (5140s) is within the limit (172800.0s)
[2025-10-13 09:03:36] 2025-10-13 00:03:01,004 | INFO     | monitor loop #382: job 0:6829492484 is in state 'finished'
[2025-10-13 09:03:36] 2025-10-13 00:03:01,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:03:36] 2025-10-13 00:03:01,695 | INFO     | job 6829492484 has state=finished
[2025-10-13 09:03:36] 2025-10-13 00:03:01,696 | INFO     | preparing for final server update for job 6829492484 in state='finished'
[2025-10-13 09:03:36] 2025-10-13 00:03:01,696 | INFO     | this job has now completed (state=finished)
[2025-10-13 09:03:36] 2025-10-13 00:03:01,696 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 09:03:36] 2025-10-13 00:03:01,696 | INFO     | log transfer has been attempted: DONE
[2025-10-13 09:03:36] 2025-10-13 00:03:01,696 | INFO     | job 6829492484 has finished - writing final server update
[2025-10-13 09:03:36] 2025-10-13 00:03:01,696 | INFO     | total number of processed events: 400 (read)
[2025-10-13 09:03:36] 2025-10-13 00:03:01,697 | INFO     | executing command: lscpu
[2025-10-13 09:03:36] 2025-10-13 00:03:01,707 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 09:03:36] 2025-10-13 00:03:02,864 | INFO     | time since job start (5142s) is within the limit (172800.0s)
[2025-10-13 09:03:36] 2025-10-13 00:03:03,450 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 09:03:36] 2025-10-13 00:03:03,452 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4100.3633
[2025-10-13 09:03:36] 2025-10-13 00:03:03,453 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6829492484/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:03:36] 2025-10-13 00:03:03,454 | INFO     | extracted standard info from prmon json
[2025-10-13 09:03:36] 2025-10-13 00:03:03,454 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:03:36] 2025-10-13 00:03:03,454 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:03:36] 2025-10-13 00:03:03,454 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:03:36] 2025-10-13 00:03:03,454 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:03:36] 2025-10-13 00:03:03,455 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:03:36] 2025-10-13 00:03:03,455 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 09:03:36] 2025-10-13 00:03:03,455 | INFO     | sum of deviations: -6494861356.999999
[2025-10-13 09:03:36] 2025-10-13 00:03:03,455 | INFO     | mean x: 1760311282.0
[2025-10-13 09:03:36] 2025-10-13 00:03:03,455 | INFO     | mean y: 2509204.3766233767
[2025-10-13 09:03:36] 2025-10-13 00:03:03,455 | INFO     | -- intersect: 80778447800.30684
[2025-10-13 09:03:36] 2025-10-13 00:03:03,455 | INFO     | intersect: 80778447800.30684
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | chi2: 0.02997257905122419
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | -- intersect: 80778447800.30684
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | current memory leak: -45.89 B/s (using 77 data points, chi2=0.03)
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | could have reported an average CPU frequency of 3719 MHz (6 samples)
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | ..............................
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . Timing measurements:
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . get job = 0 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . initial setup = 4 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . payload setup = 2 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . stage-in = 0 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . payload execution = 5116 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . stage-out = 0 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | . log creation = 0 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,456 | INFO     | ..............................
[2025-10-13 09:03:36] 2025-10-13 00:03:03,582 | INFO     | 
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | job summary report
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | --------------------------------------------------
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | PanDA job id: 6829492484
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | task id: 46373048
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | errors: (none)
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | pilot state: finished 
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | transexitcode: 0
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | exeerrorcode: 0
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | exeerrordiag: 
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | exitcode: 0
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | exitmsg: OK
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | cpuconsumptiontime: 27753 s
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | nevents: 400
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | neventsw: 0
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | pid: 158487
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | pgrp: 158487
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | corecount: 6
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | event service: False
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | sizes: {0: 2348790, 2: 2349052, 11: 2349080, 5122: 2375466, 5123: 2384519, 5126: 2384519, 5129: 2384841}
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | --------------------------------------------------
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | 
[2025-10-13 09:03:36] 2025-10-13 00:03:03,583 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:03:36] 2025-10-13 00:03:03,593 | INFO     | job 6829492484 has completed (purged errors)
[2025-10-13 09:03:36] 2025-10-13 00:03:03,593 | INFO     | overall cleanup function is called
[2025-10-13 09:03:36] 2025-10-13 00:03:04,598 | INFO     | --- collectZombieJob: --- 10, [158487]
[2025-10-13 09:03:36] 2025-10-13 00:03:04,599 | INFO     | zombie collector waiting for pid 158487
[2025-10-13 09:03:36] 2025-10-13 00:03:04,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:03:36] 2025-10-13 00:03:04,599 | INFO     | collected zombie processes
[2025-10-13 09:03:36] 2025-10-13 00:03:04,599 | INFO     | will attempt to kill all subprocesses of pid=158487
[2025-10-13 09:03:36] 2025-10-13 00:03:04,637 | INFO     | process IDs to be killed: [158487] (in reverse order)
[2025-10-13 09:03:36] 2025-10-13 00:03:04,657 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:03:36] 2025-10-13 00:03:04,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:03:36] 2025-10-13 00:03:04,659 | INFO     | did not find any defunct processes belonging to 158487
[2025-10-13 09:03:36] 2025-10-13 00:03:04,660 | INFO     | did not find any defunct processes belonging to 158487
[2025-10-13 09:03:36] 2025-10-13 00:03:04,661 | INFO     | ready for new job
[2025-10-13 09:03:36] 2025-10-13 00:03:04,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:03:36] 2025-10-13 00:03:04,661 | INFO     | ***************************************
[2025-10-13 09:03:36] 2025-10-13 00:03:04,662 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 09:03:36] 2025-10-13 00:03:04,662 | INFO     | ***************************************
[2025-10-13 09:03:36] 2025-10-13 00:03:04,662 | INFO     | 
[2025-10-13 09:03:36] 2025-10-13 00:03:04,662 | INFO     | architecture information:
[2025-10-13 09:03:36] 2025-10-13 00:03:04,662 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:03:36] 2025-10-13 00:03:04,672 | INFO     | cat /etc/os-release:
[2025-10-13 09:03:36] NAME="CentOS Linux"
[2025-10-13 09:03:36] VERSION="7 (Core)"
[2025-10-13 09:03:36] ID="centos"
[2025-10-13 09:03:36] ID_LIKE="rhel fedora"
[2025-10-13 09:03:36] VERSION_ID="7"
[2025-10-13 09:03:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:03:36] ANSI_COLOR="0;31"
[2025-10-13 09:03:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:03:36] HOME_URL="https://www.centos.org/"
[2025-10-13 09:03:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:03:36] 
[2025-10-13 09:03:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:03:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:03:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:03:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:03:36] 
[2025-10-13 09:03:36] 2025-10-13 00:03:04,672 | INFO     | ***************************************
[2025-10-13 09:03:36] 2025-10-13 00:03:05,174 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | INFO     | sufficient remaining disk space (280099815424 B)
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | INFO     | update_server=False
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:03:36] 2025-10-13 00:03:05,182 | INFO     | aborting loop
[2025-10-13 09:03:36] 2025-10-13 00:03:05,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:03:36] 2025-10-13 00:03:05,392 | INFO     | all job control threads have been joined
[2025-10-13 09:03:36] 2025-10-13 00:03:05,614 | INFO     | all data control threads have been joined
[2025-10-13 09:03:36] 2025-10-13 00:03:06,187 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,187 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,188 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,199 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,237 | INFO     | [job] validate thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:03:36] 2025-10-13 00:03:06,327 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,376 | INFO     | all payload control threads have been joined
[2025-10-13 09:03:36] 2025-10-13 00:03:06,397 | INFO     | [job] control thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,496 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,618 | INFO     | [data] control thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:06,929 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:07,056 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:07,335 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:07,340 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:07,382 | INFO     | [payload] control thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:10,255 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:16,003 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:03:36] 2025-10-13 00:03:17,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:03:36] 2025-10-13 00:03:28,233 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:03:36] 2025-10-13 00:03:29,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302953633600)>', '<ExcThread(monitor, started 140302455125760)>']
[2025-10-13 09:03:36] 2025-10-13 00:03:34,397 | INFO     | all workflow threads have been joined
[2025-10-13 09:03:36] 2025-10-13 00:03:34,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:03:36] 2025-10-13 00:03:34,398 | INFO     | traces error code: 0
[2025-10-13 09:03:36] 2025-10-13 00:03:34,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:03:36] 2025-10-13 00:03:35,996 | INFO     | PID=151763 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:03:36] 2025-10-13 00:03:36,000 | INFO     | .. there are 3 such processes running
[2025-10-13 09:03:36] 2025-10-13 00:03:36,000 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:03:36] 2025-10-13 00:03:36,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:03:36] 2025-10-13 00:03:36,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:03:36] 2025-10-13 00:03:36,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:03:36] 2025-10-13 00:03:36,000 | INFO     | [monitor] control thread has ended
[2025-10-13 09:03:36] 2025-10-13 00:03:36,081 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:03:36] 2025-10-13 00:03:36,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:03:36] 2025-10-13 00:03:36,085 [wrapper] pilotpid: 151763
[2025-10-13 09:03:36] 2025-10-13 00:03:36,087 [wrapper] Pilot exit status: 0
[2025-10-13 09:03:36] 2025-10-13 00:03:36,094 [wrapper] pandaids: 6829492484
[2025-10-13 09:03:36] 2025-10-13 00:03:36,114 [wrapper] cleanup supervisor_pilot  218582 151764
[2025-10-13 09:03:36] 2025-10-13 00:03:36,117 [wrapper] Test setup, not cleaning
[2025-10-13 09:03:36] 2025-10-13 00:03:36,118 [wrapper] apfmon messages muted
[2025-10-13 09:03:36] 2025-10-13 00:03:36,120 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:03:36] 2025-10-13 00:03:36,122 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:03:36]  *** Error codes and diagnostics ***
[2025-10-13 09:03:36]     "exeErrorCode": 0,
[2025-10-13 09:03:36]     "exeErrorDiag": "",
[2025-10-13 09:03:36]     "pilotErrorCode": 0,
[2025-10-13 09:03:36]     "pilotErrorDiag": "",
[2025-10-13 09:03:36]  *** Listing of results directory ***
[2025-10-13 09:03:36] total 412856
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc    552446 Oct  4 16:54 pilot3.tar.gz
[2025-10-13 09:03:36] -rwx------. 1 boinc boinc     36292 Oct  4 17:21 runpilot2-wrapper.sh
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc      5112 Oct  4 17:21 queuedata.json
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc       100 Oct 13 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:03:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 07:37 run_atlas
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc       105 Oct 13 07:37 job.xml
[2025-10-13 09:03:36] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:37 start_atlas.sh
[2025-10-13 09:03:36] drwxrwx--x. 2 boinc boinc        68 Oct 13 07:37 shared
[2025-10-13 09:03:36] -rw-r--r--. 2 boinc boinc    565606 Oct 13 07:37 input.tar.gz
[2025-10-13 09:03:36] -rw-r--r--. 2 boinc boinc 220206037 Oct 13 07:37 EVNT.46373045._002014.pool.root.1
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc         0 Oct 13 07:37 boinc_lockfile
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc      2537 Oct 13 07:37 pandaJob.out
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc    975603 Oct 13 07:37 agis_schedconf.cvmfs.json
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc   1560580 Oct 13 07:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:03:36] drwx------. 4 boinc boinc      4096 Oct 13 07:37 pilot3
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc      9516 Oct 13 08:45 init_data.xml
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc 196568995 Oct 13 09:02 HITS.46373048._096624.pool.root.1
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc       529 Oct 13 09:02 boinc_task_state.xml
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc      1034 Oct 13 09:02 memory_monitor_summary.json
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc    299251 Oct 13 09:02 log.46373048._096624.job.log.tgz.1
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc        95 Oct 13 09:02 pilot_heartbeat.json
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc      7762 Oct 13 09:03 heartbeat.json
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc      8192 Oct 13 09:03 boinc_mmap_file
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc        27 Oct 13 09:03 wrapper_checkpoint.txt
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc       821 Oct 13 09:03 pilotlog.txt
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc    752215 Oct 13 09:03 log.46373048._096624.job.log.1
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc       357 Oct 13 09:03 output.list
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc       620 Oct 13 09:03 runtime_log
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc   1075200 Oct 13 09:03 result.tar.gz
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc      8661 Oct 13 09:03 runtime_log.err
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc       641 Oct 13 09:03 kQ0MDmdhCP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmT8CMDmN8r7To.diag
[2025-10-13 09:03:36] -rw-r--r--. 1 boinc boinc     21420 Oct 13 09:03 stderr.txt
[2025-10-13 09:03:36] HITS file was successfully produced:
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc 196568995 Oct 13 09:02 shared/HITS.pool.root.1
[2025-10-13 09:03:36]  *** Contents of shared directory: ***
[2025-10-13 09:03:36] total 408636
[2025-10-13 09:03:36] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:37 start_atlas.sh
[2025-10-13 09:03:36] -rw-r--r--. 2 boinc boinc    565606 Oct 13 07:37 input.tar.gz
[2025-10-13 09:03:36] -rw-r--r--. 2 boinc boinc 220206037 Oct 13 07:37 ATLAS.root_0
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc 196568995 Oct 13 09:02 HITS.pool.root.1
[2025-10-13 09:03:36] -rw-------. 1 boinc boinc   1075200 Oct 13 09:03 result.tar.gz
09:03:38 (147983): run_atlas exited; CPU time 27789.035021
09:03:38 (147983): called boinc_finish(0)

</stderr_txt>
]]>

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