Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:19:14 (2053692): wrapper (7.7.26015): starting
15:19:14 (2053692): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 15:19:14] Arguments: --nthreads 12
[2025-10-12 15:19:14] Threads: 12
[2025-10-12 15:19:14] Checking for CVMFS
[2025-10-12 15:19:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:19:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:19:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:19:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:19:14] 2.13.2.0 3683012 13198 153076 151633 1 195 37674879 40960000 6635 16776704 0 151321647 99.865 55086383 32594 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:19:14] CVMFS is ok
[2025-10-12 15:19:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:19:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:19:14] Further information can be found at the LHC@home message board.
[2025-10-12 15:19:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:19:14] Checking for apptainer binary...
[2025-10-12 15:19:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:19:14] Running /usr/bin/apptainer --version
[2025-10-12 15:19:14] apptainer version 1.4.3-1.el9
[2025-10-12 15:19:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:19:14] c8-7-4.aglt2.org
[2025-10-12 15:19:14] apptainer works
[2025-10-12 15:19:14] Set ATHENA_PROC_NUMBER=12
[2025-10-12 15:19:14] Set ATHENA_CORE_NUMBER=12
[2025-10-12 15:19:14] Starting ATLAS job with PandaID=6831276420
[2025-10-12 15:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:45:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:45:31]  is_tar=False
[2025-10-12 15:45:31]  lfn=log.46376905._080933.job.log.tgz.1
[2025-10-12 15:45:31]  mtime=0
[2025-10-12 15:45:31]  protocol_id=None
[2025-10-12 15:45:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 15:45:31]  replicas=None
[2025-10-12 15:45:31]  scope=mc23_13p6TeV
[2025-10-12 15:45:31]  status=None
[2025-10-12 15:45:31]  status_code=0
[2025-10-12 15:45:31]  storage_token=
[2025-10-12 15:45:31]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6831276420/log.46376905._080933.job.log.tgz.1
[2025-10-12 15:45:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/43/log.46376905._080933.job.log.tgz.1
[2025-10-12 15:45:31]  workdir=None
[2025-10-12 15:45:31] ]
[2025-10-12 15:45:31] 2025-10-12 19:44:39,551 | INFO     | transferring file log.46376905._080933.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6831276420/log.46376905._080933.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 15:45:31] 2025-10-12 19:44:39,551 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6831276420/log.46376905._080933.job.log.tgz.1 /tmp/boinchome/slots/4/log.46376905._080933.job
[2025-10-12 15:45:31] 2025-10-12 19:44:39,562 | INFO     | adding to output.list: log.46376905._080933.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/43/log.46376905._080933.job.log.tg
[2025-10-12 15:45:31] 2025-10-12 19:44:39,562 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:45:31] 2025-10-12 19:44:39,562 | INFO     | summary of transferred files:
[2025-10-12 15:45:31] 2025-10-12 19:44:39,562 | INFO     |  -- lfn=log.46376905._080933.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:45:31] 2025-10-12 19:44:39,562 | INFO     | stage-out finished correctly
[2025-10-12 15:45:31] 2025-10-12 19:44:39,591 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:45:31] 2025-10-12 19:44:40,508 | INFO     | job 6831276420 has state=finished
[2025-10-12 15:45:31] 2025-10-12 19:44:40,508 | INFO     | preparing for final server update for job 6831276420 in state='finished'
[2025-10-12 15:45:31] 2025-10-12 19:44:40,508 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:45:31] 2025-10-12 19:44:40,508 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:45:31] 2025-10-12 19:44:40,508 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:45:31] 2025-10-12 19:44:40,509 | INFO     | job 6831276420 has finished - writing final server update
[2025-10-12 15:45:31] 2025-10-12 19:44:40,509 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:45:31] 2025-10-12 19:44:40,509 | INFO     | executing command: lscpu
[2025-10-12 15:45:31] 2025-10-12 19:44:40,549 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:45:31] 2025-10-12 19:44:41,156 | WARNING  | process 2066461 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 15:45:31] 2025-10-12 19:44:41,157 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6831276420/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:45:31] 2025-10-12 19:44:41,389 | INFO     | number of running child processes to parent process 2066461: 1
[2025-10-12 15:45:31] 2025-10-12 19:44:41,389 | INFO     | maximum number of monitored processes: 6
[2025-10-12 15:45:31] 2025-10-12 19:44:41,423 | INFO     | time since job start (1517s) is within the limit (172800.0s)
[2025-10-12 15:45:31] 2025-10-12 19:44:43,031 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 15:45:31] 2025-10-12 19:44:43,034 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3422.034374999995
[2025-10-12 15:45:31] 2025-10-12 19:44:43,042 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6831276420/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | INFO     | extracted standard info from prmon json
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | INFO     | sum of square deviations: 1802824.5
[2025-10-12 15:45:31] 2025-10-12 19:44:43,043 | INFO     | sum of deviations: -71101538.99999999
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | mean x: 1760297608.5
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | mean y: 2344842.222222222
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | -- intersect: 69426667100.08452
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | intersect: 69426667100.08452
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | chi2: 0.0021964975795241933
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | -- intersect: 69426667100.08452
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | current memory leak: -39.44 B/s (using 18 data points, chi2=0.00)
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | could have reported an average CPU frequency of 3527 MHz (4 samples)
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | ..............................
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . Timing measurements:
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . get job = 0 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . initial setup = 2 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . payload setup = 3 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . stage-in = 0 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . payload execution = 1493 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . stage-out = 0 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | . log creation = 0 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,044 | INFO     | ..............................
[2025-10-12 15:45:31] 2025-10-12 19:44:43,319 | INFO     | 
[2025-10-12 15:45:31] 2025-10-12 19:44:43,319 | INFO     | job summary report
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | --------------------------------------------------
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | PanDA job id: 6831276420
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | task id: 46376905
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | errors: (none)
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | pilot state: finished 
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | transexitcode: 0
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | exeerrorcode: 0
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | exeerrordiag: 
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | exitcode: 0
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | exitmsg: OK
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | cpuconsumptiontime: 16009 s
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | nevents: 400
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | neventsw: 0
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | pid: 2066461
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | pgrp: 2066461
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | corecount: 12
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | event service: False
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | sizes: {0: 2348644, 1: 2348843, 4: 2349105, 11: 2349133, 1500: 2373890, 1502: 2383072, 1505: 2383210}
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | --------------------------------------------------
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | 
[2025-10-12 15:45:31] 2025-10-12 19:44:43,320 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 15:45:31] 2025-10-12 19:44:43,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | job 6831276420 has completed (purged errors)
[2025-10-12 15:45:31] 2025-10-12 19:44:43,334 | INFO     | overall cleanup function is called
[2025-10-12 15:45:31] 2025-10-12 19:44:44,340 | INFO     | --- collectZombieJob: --- 10, [2066461]
[2025-10-12 15:45:31] 2025-10-12 19:44:44,340 | INFO     | zombie collector waiting for pid 2066461
[2025-10-12 15:45:31] 2025-10-12 19:44:44,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:45:31] 2025-10-12 19:44:44,341 | INFO     | collected zombie processes
[2025-10-12 15:45:31] 2025-10-12 19:44:44,341 | INFO     | will attempt to kill all subprocesses of pid=2066461
[2025-10-12 15:45:31] 2025-10-12 19:44:44,558 | INFO     | process IDs to be killed: [2066461] (in reverse order)
[2025-10-12 15:45:31] 2025-10-12 19:44:44,647 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:45:31] 2025-10-12 19:44:44,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:45:31] 2025-10-12 19:44:44,659 | INFO     | did not find any defunct processes belonging to 2066461
[2025-10-12 15:45:31] 2025-10-12 19:44:44,667 | INFO     | did not find any defunct processes belonging to 2066461
[2025-10-12 15:45:31] 2025-10-12 19:44:44,667 | INFO     | ready for new job
[2025-10-12 15:45:31] 2025-10-12 19:44:44,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:45:31] 2025-10-12 19:44:44,668 | INFO     | ***************************************
[2025-10-12 15:45:31] 2025-10-12 19:44:44,668 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 15:45:31] 2025-10-12 19:44:44,668 | INFO     | ***************************************
[2025-10-12 15:45:31] 2025-10-12 19:44:44,668 | INFO     | 
[2025-10-12 15:45:31] 2025-10-12 19:44:44,684 | INFO     | architecture information:
[2025-10-12 15:45:31] 2025-10-12 19:44:44,684 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:45:31] 2025-10-12 19:44:44,695 | INFO     | cat /etc/os-release:
[2025-10-12 15:45:31] NAME="CentOS Linux"
[2025-10-12 15:45:31] VERSION="7 (Core)"
[2025-10-12 15:45:31] ID="centos"
[2025-10-12 15:45:31] ID_LIKE="rhel fedora"
[2025-10-12 15:45:31] VERSION_ID="7"
[2025-10-12 15:45:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:45:31] ANSI_COLOR="0;31"
[2025-10-12 15:45:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:45:31] HOME_URL="https://www.centos.org/"
[2025-10-12 15:45:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:45:31] 
[2025-10-12 15:45:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:45:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:45:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:45:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:45:31] 
[2025-10-12 15:45:31] 2025-10-12 19:44:44,696 | INFO     | ***************************************
[2025-10-12 15:45:31] 2025-10-12 19:44:45,199 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 15:45:31] 2025-10-12 19:44:45,210 | INFO     | sufficient remaining disk space (167486947328 B)
[2025-10-12 15:45:31] 2025-10-12 19:44:45,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:45:31] 2025-10-12 19:44:45,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:45:31] 2025-10-12 19:44:45,211 | INFO     | update_server=False
[2025-10-12 15:45:31] 2025-10-12 19:44:45,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:45:31] 2025-10-12 19:44:45,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:45:31] 2025-10-12 19:44:45,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:45:31] 2025-10-12 19:44:45,211 | INFO     | aborting loop
[2025-10-12 15:45:31] 2025-10-12 19:44:45,535 | INFO     | all data control threads have been joined
[2025-10-12 15:45:31] 2025-10-12 19:44:45,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:45:31] 2025-10-12 19:44:46,033 | INFO     | all payload control threads have been joined
[2025-10-12 15:45:31] 2025-10-12 19:44:46,215 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:46,217 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:46,277 | INFO     | all job control threads have been joined
[2025-10-12 15:45:31] 2025-10-12 19:44:46,388 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:46,540 | INFO     | [data] control thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:46,566 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,039 | INFO     | [payload] control thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,084 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,088 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,216 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,283 | INFO     | [job] control thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,418 | INFO     | [job] validate thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,489 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,560 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:47,600 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:48,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:45:31] 2025-10-12 19:44:49,092 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:44:49,633 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:45:31] 2025-10-12 19:45:14,778 | INFO     | PID=2057426 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:45:31] 2025-10-12 19:45:14,778 | INFO     | .. there are 10 such processes running
[2025-10-12 15:45:31] 2025-10-12 19:45:14,779 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:45:31] 2025-10-12 19:45:14,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:45:31] 2025-10-12 19:45:14,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:45:31] 2025-10-12 19:45:25,908 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:45:31] 2025-10-12 19:45:26,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646446245696)>', '<ExcThread(monitor, started 139645811676928)>']
[2025-10-12 15:45:31] 2025-10-12 19:45:26,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:45:31] 2025-10-12 19:45:26,839 | INFO     | [monitor] control thread has ended
[2025-10-12 15:45:31] 2025-10-12 19:45:31,092 | INFO     | all workflow threads have been joined
[2025-10-12 15:45:31] 2025-10-12 19:45:31,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:45:31] 2025-10-12 19:45:31,093 | INFO     | traces error code: 0
[2025-10-12 15:45:31] 2025-10-12 19:45:31,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:45:31] 2025-10-12 19:45:31,174 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:45:31] 2025-10-12 19:45:31,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:45:31] 2025-10-12 19:45:31,178 [wrapper] pilotpid: 2057426
[2025-10-12 15:45:31] 2025-10-12 19:45:31,180 [wrapper] Pilot exit status: 0
[2025-10-12 15:45:31] 2025-10-12 19:45:31,186 [wrapper] pandaids: 6831276420
[2025-10-12 15:45:31] 2025-10-12 19:45:31,250 [wrapper] cleanup supervisor_pilot 2128697 2057427
[2025-10-12 15:45:31] 2025-10-12 19:45:31,252 [wrapper] Test setup, not cleaning
[2025-10-12 15:45:31] 2025-10-12 19:45:31,254 [wrapper] apfmon messages muted
[2025-10-12 15:45:31] 2025-10-12 19:45:31,256 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:45:31] 2025-10-12 19:45:31,257 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:45:31]  *** Error codes and diagnostics ***
[2025-10-12 15:45:31]     "exeErrorCode": 0,
[2025-10-12 15:45:31]     "exeErrorDiag": "",
[2025-10-12 15:45:31]     "pilotErrorCode": 0,
[2025-10-12 15:45:31]     "pilotErrorDiag": "",
[2025-10-12 15:45:31]  *** Listing of results directory ***
[2025-10-12 15:45:31] total 386580
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 05:49 pilot3.tar.gz
[2025-10-12 15:45:31] -rwx------. 1 boincer umatlas     36292 Oct  5 05:49 runpilot2-wrapper.sh
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 05:49 queuedata.json
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:45:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:19 run_atlas
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:19 job.xml
[2025-10-12 15:45:31] -rw-r--r--. 2 boincer umatlas 216061030 Oct 12 15:19 EVNT.46376901._002963.pool.root.1
[2025-10-12 15:45:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:19 start_atlas.sh
[2025-10-12 15:45:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:19 shared
[2025-10-12 15:45:31] -rw-r--r--. 2 boincer umatlas    565598 Oct 12 15:19 input.tar.gz
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:19 boinc_lockfile
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas      2518 Oct 12 15:19 pandaJob.out
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas    975528 Oct 12 15:19 agis_schedconf.cvmfs.json
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:45:31] drwx------. 4 boincer umatlas      4096 Oct 12 15:19 pilot3
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas      7164 Oct 12 15:38 init_data.xml
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas 174707895 Oct 12 15:44 HITS.46376905._080933.pool.root.1
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas       529 Oct 12 15:44 boinc_task_state.xml
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas      1027 Oct 12 15:44 memory_monitor_summary.json
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas    342393 Oct 12 15:44 log.46376905._080933.job.log.tgz.1
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas      7769 Oct 12 15:44 heartbeat.json
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas        95 Oct 12 15:45 pilot_heartbeat.json
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:45 boinc_mmap_file
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:45 wrapper_checkpoint.txt
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas      4825 Oct 12 15:45 pilotlog.txt
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas    257379 Oct 12 15:45 log.46376905._080933.job.log.1
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas       357 Oct 12 15:45 output.list
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:45 runtime_log
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas    614400 Oct 12 15:45 result.tar.gz
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 15:45 runtime_log.err
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas       648 Oct 12 15:45 4pIODmWYaP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmalONDmXGf4pn.diag
[2025-10-12 15:45:31] -rw-r--r--. 1 boincer umatlas     21565 Oct 12 15:45 stderr.txt
[2025-10-12 15:45:31] HITS file was successfully produced:
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas 174707895 Oct 12 15:44 shared/HITS.pool.root.1
[2025-10-12 15:45:31]  *** Contents of shared directory: ***
[2025-10-12 15:45:31] total 382796
[2025-10-12 15:45:31] -rw-r--r--. 2 boincer umatlas 216061030 Oct 12 15:19 ATLAS.root_0
[2025-10-12 15:45:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:19 start_atlas.sh
[2025-10-12 15:45:31] -rw-r--r--. 2 boincer umatlas    565598 Oct 12 15:19 input.tar.gz
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas 174707895 Oct 12 15:44 HITS.pool.root.1
[2025-10-12 15:45:31] -rw-------. 1 boincer umatlas    614400 Oct 12 15:45 result.tar.gz
15:45:33 (2053692): run_atlas exited; CPU time 16032.015342
15:45:33 (2053692): called boinc_finish(0)

</stderr_txt>
]]>

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