Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:16:53 (31925): wrapper (7.7.26015): starting
15:16:53 (31925): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 15:16:53] Arguments: --nthreads 12
[2025-10-12 15:16:53] Threads: 12
[2025-10-12 15:16:53] Checking for CVMFS
[2025-10-12 15:16:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:16:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:16:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:16:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:16:53] 2.11.2.0 2991 223244 99616 151633 1 57 14816280 20275201 1 130560 1 109737039 99.983 13469047 12481 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:16:53] CVMFS is ok
[2025-10-12 15:16:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:16:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:16:53] Further information can be found at the LHC@home message board.
[2025-10-12 15:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:16:53] Checking for apptainer binary...
[2025-10-12 15:16:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:16:53] Running /usr/bin/apptainer --version
[2025-10-12 15:16:53] apptainer version 1.3.2-1.el7
[2025-10-12 15:16:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:16:55] c-205-32.aglt2.org
[2025-10-12 15:16:55] apptainer works
[2025-10-12 15:16:55] Set ATHENA_PROC_NUMBER=12
[2025-10-12 15:16:55] Set ATHENA_CORE_NUMBER=12
[2025-10-12 15:16:55] Starting ATLAS job with PandaID=6840530440
[2025-10-12 15:16:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:31:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:31:22]  lfn=log.46676269._085366.job.log.tgz.1
[2025-10-12 16:31:22]  mtime=0
[2025-10-12 16:31:22]  protocol_id=None
[2025-10-12 16:31:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 16:31:22]  replicas=None
[2025-10-12 16:31:22]  scope=mc23_13p6TeV
[2025-10-12 16:31:22]  status=None
[2025-10-12 16:31:22]  status_code=0
[2025-10-12 16:31:22]  storage_token=
[2025-10-12 16:31:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840530440/log.46676269._085366.job.log.tgz.1
[2025-10-12 16:31:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/d1/log.46676269._085366.job.log.tgz.1
[2025-10-12 16:31:22]  workdir=None
[2025-10-12 16:31:22] ]
[2025-10-12 16:31:22] 2025-10-12 20:30:26,293 | INFO     | transferring file log.46676269._085366.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840530440/log.46676269._085366.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 16:31:22] 2025-10-12 20:30:26,293 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840530440/log.46676269._085366.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._085366.job
[2025-10-12 16:31:22] 2025-10-12 20:30:26,314 | INFO     | adding to output.list: log.46676269._085366.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/d1/log.46676269._085366.job.log.tg
[2025-10-12 16:31:22] 2025-10-12 20:30:26,315 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:31:22] 2025-10-12 20:30:26,315 | INFO     | summary of transferred files:
[2025-10-12 16:31:22] 2025-10-12 20:30:26,315 | INFO     |  -- lfn=log.46676269._085366.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:31:22] 2025-10-12 20:30:26,316 | INFO     | stage-out finished correctly
[2025-10-12 16:31:22] 2025-10-12 20:30:27,845 | INFO     | time since job start (4398s) is within the limit (172800.0s)
[2025-10-12 16:31:22] 2025-10-12 20:30:28,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:31:22] 2025-10-12 20:30:28,537 | INFO     | job 6840530440 has state=finished
[2025-10-12 16:31:22] 2025-10-12 20:30:28,537 | INFO     | preparing for final server update for job 6840530440 in state='finished'
[2025-10-12 16:31:22] 2025-10-12 20:30:28,538 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:31:22] 2025-10-12 20:30:28,538 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:31:22] 2025-10-12 20:30:28,538 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:31:22] 2025-10-12 20:30:28,538 | INFO     | job 6840530440 has finished - writing final server update
[2025-10-12 16:31:22] 2025-10-12 20:30:28,539 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:31:22] 2025-10-12 20:30:28,540 | INFO     | executing command: lscpu
[2025-10-12 16:31:22] 2025-10-12 20:30:28,564 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:31:22] 2025-10-12 20:30:29,850 | INFO     | time since job start (4400s) is within the limit (172800.0s)
[2025-10-12 16:31:22] 2025-10-12 20:30:31,856 | INFO     | time since job start (4402s) is within the limit (172800.0s)
[2025-10-12 16:31:22] 2025-10-12 20:30:32,304 | WARNING  | process 9744 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 16:31:22] 2025-10-12 20:30:32,304 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840530440/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:31:22] 2025-10-12 20:30:32,410 | INFO     | number of running child processes to parent process 9744: 1
[2025-10-12 16:31:22] 2025-10-12 20:30:32,410 | INFO     | maximum number of monitored processes: 6
[2025-10-12 16:31:22] 2025-10-12 20:30:33,007 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 16:31:22] 2025-10-12 20:30:33,012 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 16:31:22] 2025-10-12 20:30:33,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840530440/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:31:22] 2025-10-12 20:30:33,016 | INFO     | extracted standard info from prmon json
[2025-10-12 16:31:22] 2025-10-12 20:30:33,016 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:31:22] 2025-10-12 20:30:33,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:31:22] 2025-10-12 20:30:33,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:31:22] 2025-10-12 20:30:33,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:31:22] 2025-10-12 20:30:33,019 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:31:22] 2025-10-12 20:30:33,020 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 16:31:22] 2025-10-12 20:30:33,020 | INFO     | sum of deviations: -706092445.9999999
[2025-10-12 16:31:22] 2025-10-12 20:30:33,020 | INFO     | mean x: 1760298914.0
[2025-10-12 16:31:22] 2025-10-12 20:30:33,020 | INFO     | mean y: 2690857.476923077
[2025-10-12 16:31:22] 2025-10-12 20:30:33,020 | INFO     | -- intersect: 14601999706.954885
[2025-10-12 16:31:22] 2025-10-12 20:30:33,020 | INFO     | intersect: 14601999706.954885
[2025-10-12 16:31:22] 2025-10-12 20:30:33,021 | INFO     | chi2: 0.058312483111282565
[2025-10-12 16:31:22] 2025-10-12 20:30:33,021 | INFO     | -- intersect: 14601999706.954885
[2025-10-12 16:31:22] 2025-10-12 20:30:33,021 | INFO     | current memory leak: -8.29 B/s (using 65 data points, chi2=0.06)
[2025-10-12 16:31:22] 2025-10-12 20:30:33,021 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-10-12 16:31:22] 2025-10-12 20:30:33,021 | INFO     | ..............................
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . Timing measurements:
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . get job = 0 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . initial setup = 2 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . payload setup = 6 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . stage-in = 0 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . payload execution = 4370 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . stage-out = 0 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | . log creation = 0 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,022 | INFO     | ..............................
[2025-10-12 16:31:22] 2025-10-12 20:30:33,315 | INFO     | 
[2025-10-12 16:31:22] 2025-10-12 20:30:33,316 | INFO     | job summary report
[2025-10-12 16:31:22] 2025-10-12 20:30:33,316 | INFO     | --------------------------------------------------
[2025-10-12 16:31:22] 2025-10-12 20:30:33,316 | INFO     | PanDA job id: 6840530440
[2025-10-12 16:31:22] 2025-10-12 20:30:33,316 | INFO     | task id: 46676269
[2025-10-12 16:31:22] 2025-10-12 20:30:33,316 | INFO     | errors: (none)
[2025-10-12 16:31:22] 2025-10-12 20:30:33,317 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:31:22] 2025-10-12 20:30:33,317 | INFO     | pilot state: finished 
[2025-10-12 16:31:22] 2025-10-12 20:30:33,317 | INFO     | transexitcode: 0
[2025-10-12 16:31:22] 2025-10-12 20:30:33,317 | INFO     | exeerrorcode: 0
[2025-10-12 16:31:22] 2025-10-12 20:30:33,317 | INFO     | exeerrordiag: 
[2025-10-12 16:31:22] 2025-10-12 20:30:33,317 | INFO     | exitcode: 0
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | exitmsg: OK
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | cpuconsumptiontime: 46807 s
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | nevents: 400
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | neventsw: 0
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | pid: 9744
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | pgrp: 9744
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | corecount: 12
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | event service: False
[2025-10-12 16:31:22] 2025-10-12 20:30:33,318 | INFO     | sizes: {0: 2348807, 5: 2349069, 11: 2349125, 4381: 2384207, 4384: 2384207, 4388: 2384401}
[2025-10-12 16:31:22] 2025-10-12 20:30:33,319 | INFO     | --------------------------------------------------
[2025-10-12 16:31:22] 2025-10-12 20:30:33,319 | INFO     | 
[2025-10-12 16:31:22] 2025-10-12 20:30:33,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:31:22] 2025-10-12 20:30:33,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:31:22] 2025-10-12 20:30:33,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:31:22] 2025-10-12 20:30:33,346 | INFO     | job 6840530440 has completed (purged errors)
[2025-10-12 16:31:22] 2025-10-12 20:30:33,346 | INFO     | overall cleanup function is called
[2025-10-12 16:31:22] 2025-10-12 20:30:34,354 | INFO     | --- collectZombieJob: --- 10, [9744]
[2025-10-12 16:31:22] 2025-10-12 20:30:34,354 | INFO     | zombie collector waiting for pid 9744
[2025-10-12 16:31:22] 2025-10-12 20:30:34,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:31:22] 2025-10-12 20:30:34,355 | INFO     | collected zombie processes
[2025-10-12 16:31:22] 2025-10-12 20:30:34,355 | INFO     | will attempt to kill all subprocesses of pid=9744
[2025-10-12 16:31:22] 2025-10-12 20:30:34,446 | INFO     | process IDs to be killed: [9744] (in reverse order)
[2025-10-12 16:31:22] 2025-10-12 20:30:34,497 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:31:22] 2025-10-12 20:30:34,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:31:22] 2025-10-12 20:30:34,499 | INFO     | did not find any defunct processes belonging to 9744
[2025-10-12 16:31:22] 2025-10-12 20:30:34,502 | INFO     | did not find any defunct processes belonging to 9744
[2025-10-12 16:31:22] 2025-10-12 20:30:34,503 | INFO     | ready for new job
[2025-10-12 16:31:22] 2025-10-12 20:30:34,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:31:22] 2025-10-12 20:30:34,505 | INFO     | ***************************************
[2025-10-12 16:31:22] 2025-10-12 20:30:34,505 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:31:22] 2025-10-12 20:30:34,505 | INFO     | ***************************************
[2025-10-12 16:31:22] 2025-10-12 20:30:34,505 | INFO     | 
[2025-10-12 16:31:22] 2025-10-12 20:30:34,506 | INFO     | architecture information:
[2025-10-12 16:31:22] 2025-10-12 20:30:34,506 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:31:22] 2025-10-12 20:30:34,521 | INFO     | cat /etc/os-release:
[2025-10-12 16:31:22] NAME="CentOS Linux"
[2025-10-12 16:31:22] VERSION="7 (Core)"
[2025-10-12 16:31:22] ID="centos"
[2025-10-12 16:31:22] ID_LIKE="rhel fedora"
[2025-10-12 16:31:22] VERSION_ID="7"
[2025-10-12 16:31:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:31:22] ANSI_COLOR="0;31"
[2025-10-12 16:31:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:31:22] HOME_URL="https://www.centos.org/"
[2025-10-12 16:31:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:31:22] 
[2025-10-12 16:31:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:31:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:31:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:31:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:31:22] 
[2025-10-12 16:31:22] 2025-10-12 20:30:34,521 | INFO     | ***************************************
[2025-10-12 16:31:22] 2025-10-12 20:30:35,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:31:22] 2025-10-12 20:30:35,041 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-10-12 16:31:22] 2025-10-12 20:30:35,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:31:22] 2025-10-12 20:30:35,041 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:31:22] 2025-10-12 20:30:35,042 | INFO     | update_server=False
[2025-10-12 16:31:22] 2025-10-12 20:30:35,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:31:22] 2025-10-12 20:30:35,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:31:22] 2025-10-12 20:30:35,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:31:22] 2025-10-12 20:30:35,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:31:22] 2025-10-12 20:30:35,464 | INFO     | all data control threads have been joined
[2025-10-12 16:31:22] 2025-10-12 20:30:35,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:31:22] 2025-10-12 20:30:35,917 | INFO     | aborting loop
[2025-10-12 16:31:22] 2025-10-12 20:30:36,045 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,048 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,103 | INFO     | all job control threads have been joined
[2025-10-12 16:31:22] 2025-10-12 20:30:36,165 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,307 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,321 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,376 | INFO     | all payload control threads have been joined
[2025-10-12 16:31:22] 2025-10-12 20:30:36,469 | INFO     | [data] control thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,858 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,934 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,963 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:36,992 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:37,048 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:37,106 | INFO     | [job] control thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:37,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:37,367 | INFO     | [job] validate thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:37,382 | INFO     | [payload] control thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:30:39,048 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:31:22] 2025-10-12 20:31:05,063 | INFO     | PID=3389 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:31:22] 2025-10-12 20:31:05,063 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:31:22] 2025-10-12 20:31:05,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:31:22] 2025-10-12 20:31:05,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:31:22] 2025-10-12 20:31:15,921 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:31:22] 2025-10-12 20:31:17,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356930266944)>', '<ExcThread(monitor, started 140356494546688)>']
[2025-10-12 16:31:22] 2025-10-12 20:31:18,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:31:22] 2025-10-12 20:31:18,130 | INFO     | [monitor] control thread has ended
[2025-10-12 16:31:22] 2025-10-12 20:31:22,392 | INFO     | all workflow threads have been joined
[2025-10-12 16:31:22] 2025-10-12 20:31:22,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:31:22] 2025-10-12 20:31:22,393 | INFO     | traces error code: 0
[2025-10-12 16:31:22] 2025-10-12 20:31:22,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:31:22] 2025-10-12 20:31:22,494 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:31:22] 2025-10-12 20:31:22,497 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:31:22] 2025-10-12 20:31:22,501 [wrapper] pilotpid: 3389
[2025-10-12 16:31:22] 2025-10-12 20:31:22,504 [wrapper] Pilot exit status: 0
[2025-10-12 16:31:22] 2025-10-12 20:31:22,519 [wrapper] pandaids: 6840530440
[2025-10-12 16:31:22] 2025-10-12 20:31:22,565 [wrapper] cleanup supervisor_pilot 16864 3390
[2025-10-12 16:31:22] 2025-10-12 20:31:22,569 [wrapper] Test setup, not cleaning
[2025-10-12 16:31:22] 2025-10-12 20:31:22,572 [wrapper] apfmon messages muted
[2025-10-12 16:31:22] 2025-10-12 20:31:22,576 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:31:22] 2025-10-12 20:31:22,579 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:31:22]  *** Error codes and diagnostics ***
[2025-10-12 16:31:22]     "exeErrorCode": 0,
[2025-10-12 16:31:22]     "exeErrorDiag": "",
[2025-10-12 16:31:22]     "pilotErrorCode": 0,
[2025-10-12 16:31:22]     "pilotErrorDiag": "",
[2025-10-12 16:31:22]  *** Listing of results directory ***
[2025-10-12 16:31:22] total 408196
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:52 queuedata.json
[2025-10-12 16:31:22] -rwx------ 1 boincer umatlas     36292 Oct 12 13:53 runpilot2-wrapper.sh
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:31:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:16 run_atlas
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:16 job.xml
[2025-10-12 16:31:22] -rw-r--r-- 2 boincer umatlas 220969540 Oct 12 15:16 EVNT.46676267._002104.pool.root.1
[2025-10-12 16:31:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:16 shared
[2025-10-12 16:31:22] -rw-r--r-- 2 boincer umatlas    569691 Oct 12 15:16 input.tar.gz
[2025-10-12 16:31:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:16 start_atlas.sh
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:16 boinc_lockfile
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:16 pandaJob.out
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas    975528 Oct 12 15:17 agis_schedconf.cvmfs.json
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas   1560580 Oct 12 15:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:31:22] drwx------ 5 boincer umatlas      4096 Oct 12 15:17 pilot3
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas 191052279 Oct 12 16:29 HITS.46676269._085366.pool.root.1
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas       529 Oct 12 16:29 boinc_task_state.xml
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas        95 Oct 12 16:30 pilot_heartbeat.json
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas      1049 Oct 12 16:30 memory_monitor_summary.json
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas    396697 Oct 12 16:30 log.46676269._085366.job.log.tgz.1
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas      7851 Oct 12 16:30 heartbeat.json
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 16:31 init_data.xml
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:31 boinc_mmap_file
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas        27 Oct 12 16:31 wrapper_checkpoint.txt
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas      4745 Oct 12 16:31 pilotlog.txt
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas    638507 Oct 12 16:31 log.46676269._085366.job.log.1
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas       357 Oct 12 16:31 output.list
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:31 runtime_log
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas   1054720 Oct 12 16:31 result.tar.gz
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 16:31 runtime_log.err
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas       659 Oct 12 16:31 3E3LDmMRFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuwkNDmeWSX2m.diag
[2025-10-12 16:31:22] -rw-r--r-- 1 boincer umatlas     21609 Oct 12 16:31 stderr.txt
[2025-10-12 16:31:22] HITS file was successfully produced:
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas 191052279 Oct 12 16:29 shared/HITS.pool.root.1
[2025-10-12 16:31:22]  *** Contents of shared directory: ***
[2025-10-12 16:31:22] total 403980
[2025-10-12 16:31:22] -rw-r--r-- 2 boincer umatlas 220969540 Oct 12 15:16 ATLAS.root_0
[2025-10-12 16:31:22] -rw-r--r-- 2 boincer umatlas    569691 Oct 12 15:16 input.tar.gz
[2025-10-12 16:31:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:16 start_atlas.sh
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas 191052279 Oct 12 16:29 HITS.pool.root.1
[2025-10-12 16:31:22] -rw------- 1 boincer umatlas   1054720 Oct 12 16:31 result.tar.gz
16:31:23 (31925): run_atlas exited; CPU time 46785.290279
16:31:23 (31925): called boinc_finish(0)

</stderr_txt>
]]>

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