Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:49:29 (3415842): wrapper (7.7.26015): starting
15:49:29 (3415842): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 15:49:29] Arguments: --nthreads 9
[2025-10-12 15:49:29] Threads: 9
[2025-10-12 15:49:29] Checking for CVMFS
[2025-10-12 15:49:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:49:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:49:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:49:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:49:32] 2.13.2.0 1125174 115652 204420 151635 3 26 23658901 39288833 8868 16776704 2 72416766 99.664 62259045 33326 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:49:32] CVMFS is ok
[2025-10-12 15:49:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:49:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:49:32] Further information can be found at the LHC@home message board.
[2025-10-12 15:49:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:49:32] Checking for apptainer binary...
[2025-10-12 15:49:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:49:32] Running /usr/bin/apptainer --version
[2025-10-12 15:49:32] apptainer version 1.4.3-1.el9
[2025-10-12 15:49:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:49:34] c-210-19.aglt2.org
[2025-10-12 15:49:34] apptainer works
[2025-10-12 15:49:34] Set ATHENA_PROC_NUMBER=9
[2025-10-12 15:49:34] Set ATHENA_CORE_NUMBER=9
[2025-10-12 15:49:35] Starting ATLAS job with PandaID=6840430329
[2025-10-12 15:49:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:04:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:04:29] 2025-10-13 03:03:51,280 | INFO     | PID=3422509 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 23:04:29] 2025-10-13 03:03:51,280 | INFO     | .. there are 7 such processes running
[2025-10-12 23:04:29] 2025-10-13 03:03:51,997 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:04:29] 2025-10-13 03:03:52,046 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2594.7859999999996
[2025-10-12 23:04:29] 2025-10-13 03:03:52,054 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840430329/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,055 | INFO     | extracted standard info from prmon json
[2025-10-12 23:04:29] 2025-10-13 03:03:52,055 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:04:29] 2025-10-13 03:03:52,056 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:04:29] 2025-10-13 03:03:52,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:04:29] 2025-10-13 03:03:52,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:04:29] 2025-10-13 03:03:52,066 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:04:29] 2025-10-13 03:03:52,067 | INFO     | sum of square deviations: 23310477684.37206
[2025-10-12 23:04:29] 2025-10-13 03:03:52,072 | INFO     | sum of deviations: 339355630368.48047
[2025-10-12 23:04:29] 2025-10-13 03:03:52,072 | INFO     | mean x: 1760311747.1729858
[2025-10-12 23:04:29] 2025-10-13 03:03:52,073 | INFO     | mean y: 2478263.0071090045
[2025-10-12 23:04:29] 2025-10-13 03:03:52,073 | INFO     | -- intersect: -25624268245.384827
[2025-10-12 23:04:29] 2025-10-13 03:03:52,073 | INFO     | intersect: -25624268245.384827
[2025-10-12 23:04:29] 2025-10-13 03:03:52,074 | INFO     | chi2: 4.998812794623426
[2025-10-12 23:04:29] 2025-10-13 03:03:52,074 | INFO     | sum of square deviations: 22491823639.323772
[2025-10-12 23:04:29] 2025-10-13 03:03:52,080 | INFO     | sum of deviations: 361847439622.76263
[2025-10-12 23:04:29] 2025-10-13 03:03:52,080 | INFO     | mean x: 1760311594.6618705
[2025-10-12 23:04:29] 2025-10-13 03:03:52,080 | INFO     | mean y: 2482406.381294964
[2025-10-12 23:04:29] 2025-10-13 03:03:52,081 | INFO     | -- intersect: -28317330770.217617
[2025-10-12 23:04:29] 2025-10-13 03:03:52,081 | INFO     | intersect: -28317330770.217617
[2025-10-12 23:04:29] 2025-10-13 03:03:52,082 | INFO     | chi2: 4.295938529000795
[2025-10-12 23:04:29] 2025-10-13 03:03:52,082 | INFO     | current chi2=4.295938529000795 (change=14.060823929606277 %)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,082 | INFO     | right removable region: 416
[2025-10-12 23:04:29] 2025-10-13 03:03:52,083 | INFO     | sum of square deviations: 22491545709.889847
[2025-10-12 23:04:29] 2025-10-13 03:03:52,088 | INFO     | sum of deviations: 218115948560.79626
[2025-10-12 23:04:29] 2025-10-13 03:03:52,088 | INFO     | mean x: 1760311899.7098322
[2025-10-12 23:04:29] 2025-10-13 03:03:52,089 | INFO     | mean y: 2500815.659472422
[2025-10-12 23:04:29] 2025-10-13 03:03:52,089 | INFO     | -- intersect: -17068451297.660076
[2025-10-12 23:04:29] 2025-10-13 03:03:52,089 | INFO     | intersect: -17068451297.660076
[2025-10-12 23:04:29] 2025-10-13 03:03:52,090 | INFO     | chi2: 1.9749149567071804
[2025-10-12 23:04:29] 2025-10-13 03:03:52,090 | INFO     | current chi2=1.9749149567071804 (change=60.49232011986246 %)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,090 | INFO     | sum of square deviations: 21691933240.24026
[2025-10-12 23:04:29] 2025-10-13 03:03:52,095 | INFO     | sum of deviations: 175075678440.3423
[2025-10-12 23:04:29] 2025-10-13 03:03:52,096 | INFO     | mean x: 1760312052.2548544
[2025-10-12 23:04:29] 2025-10-13 03:03:52,096 | INFO     | mean y: 2509004.453883495
[2025-10-12 23:04:29] 2025-10-13 03:03:52,096 | INFO     | -- intersect: -14204976488.057081
[2025-10-12 23:04:29] 2025-10-13 03:03:52,096 | INFO     | intersect: -14204976488.057081
[2025-10-12 23:04:29] 2025-10-13 03:03:52,097 | INFO     | chi2: 1.6175800951418888
[2025-10-12 23:04:29] 2025-10-13 03:03:52,097 | INFO     | current chi2=1.6175800951418888 (change=18.093683495165987 %)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,097 | INFO     | left removable region: 20
[2025-10-12 23:04:29] 2025-10-13 03:03:52,098 | INFO     | sum of square deviations: 19261623409.18178
[2025-10-12 23:04:29] 2025-10-13 03:03:52,103 | INFO     | sum of deviations: 149789521095.83325
[2025-10-12 23:04:29] 2025-10-13 03:03:52,103 | INFO     | mean x: 1760312174.2878788
[2025-10-12 23:04:29] 2025-10-13 03:03:52,103 | INFO     | mean y: 2523421.027777778
[2025-10-12 23:04:29] 2025-10-13 03:03:52,104 | INFO     | -- intersect: -13686681894.867609
[2025-10-12 23:04:29] 2025-10-13 03:03:52,104 | INFO     | intersect: -13686681894.867609
[2025-10-12 23:04:29] 2025-10-13 03:03:52,104 | INFO     | chi2: 0.7244681653167532
[2025-10-12 23:04:29] 2025-10-13 03:03:52,105 | INFO     | -- intersect: -13686681894.867609
[2025-10-12 23:04:29] 2025-10-13 03:03:52,105 | INFO     | current memory leak: 7.78 B/s (using 396 data points, chi2=0.72)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,106 | INFO     | could have reported an average CPU frequency of 2598 MHz (17 samples)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,106 | INFO     | ..............................
[2025-10-12 23:04:29] 2025-10-13 03:03:52,106 | INFO     | . Timing measurements:
[2025-10-12 23:04:29] 2025-10-13 03:03:52,106 | INFO     | . get job = 0 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,106 | INFO     | . initial setup = 7 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,106 | INFO     | . payload setup = 73 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,106 | INFO     | . stage-in = 0 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,107 | INFO     | . payload execution = 25756 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,107 | INFO     | . stage-out = 2 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,107 | INFO     | . log creation = 0 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,107 | INFO     | ..............................
[2025-10-12 23:04:29] 2025-10-13 03:03:52,231 | INFO     | 
[2025-10-12 23:04:29] 2025-10-13 03:03:52,231 | INFO     | job summary report
[2025-10-12 23:04:29] 2025-10-13 03:03:52,231 | INFO     | --------------------------------------------------
[2025-10-12 23:04:29] 2025-10-13 03:03:52,231 | INFO     | PanDA job id: 6840430329
[2025-10-12 23:04:29] 2025-10-13 03:03:52,231 | INFO     | task id: 46676269
[2025-10-12 23:04:29] 2025-10-13 03:03:52,231 | INFO     | errors: (none)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | pilot state: finished 
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | transexitcode: 0
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | exeerrorcode: 0
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | exeerrordiag: 
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | exitcode: 0
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | exitmsg: OK
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | cpuconsumptiontime: 52591 s
[2025-10-12 23:04:29] 2025-10-13 03:03:52,232 | INFO     | nevents: 400
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | neventsw: 0
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | pid: 3430491
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | pgrp: 3430491
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | corecount: 9
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | event service: False
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 13: 2348913, 25: 2348969, 37: 2348997, 45: 2349415, 48: 2349443, 25833: 2385375, 25836: 2394373, 25838: 2394429, 25850:
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | --------------------------------------------------
[2025-10-12 23:04:29] 2025-10-13 03:03:52,233 | INFO     | 
[2025-10-12 23:04:29] 2025-10-13 03:03:52,234 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:04:29] 2025-10-13 03:03:52,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:04:29] 2025-10-13 03:03:52,267 | INFO     | job 6840430329 has completed (purged errors)
[2025-10-12 23:04:29] 2025-10-13 03:03:52,267 | INFO     | overall cleanup function is called
[2025-10-12 23:04:29] 2025-10-13 03:03:53,301 | INFO     | --- collectZombieJob: --- 10, [3430491]
[2025-10-12 23:04:29] 2025-10-13 03:03:53,301 | INFO     | zombie collector waiting for pid 3430491
[2025-10-12 23:04:29] 2025-10-13 03:03:53,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:04:29] 2025-10-13 03:03:53,301 | INFO     | collected zombie processes
[2025-10-12 23:04:29] 2025-10-13 03:03:53,301 | INFO     | will attempt to kill all subprocesses of pid=3430491
[2025-10-12 23:04:29] 2025-10-13 03:03:55,986 | INFO     | process IDs to be killed: [3430491] (in reverse order)
[2025-10-12 23:04:29] 2025-10-13 03:03:56,814 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:04:29] 2025-10-13 03:03:56,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:04:29] 2025-10-13 03:03:56,823 | INFO     | did not find any defunct processes belonging to 3430491
[2025-10-12 23:04:29] 2025-10-13 03:03:56,841 | INFO     | did not find any defunct processes belonging to 3430491
[2025-10-12 23:04:29] 2025-10-13 03:03:56,841 | INFO     | ready for new job
[2025-10-12 23:04:29] 2025-10-13 03:03:56,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:04:29] 2025-10-13 03:03:56,844 | INFO     | ***************************************
[2025-10-12 23:04:29] 2025-10-13 03:03:56,845 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:04:29] 2025-10-13 03:03:56,845 | INFO     | ***************************************
[2025-10-12 23:04:29] 2025-10-13 03:03:56,845 | INFO     | 
[2025-10-12 23:04:29] 2025-10-13 03:03:56,848 | INFO     | architecture information:
[2025-10-12 23:04:29] 2025-10-13 03:03:56,848 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:04:29] 2025-10-13 03:03:56,874 | INFO     | cat /etc/os-release:
[2025-10-12 23:04:29] NAME="CentOS Linux"
[2025-10-12 23:04:29] VERSION="7 (Core)"
[2025-10-12 23:04:29] ID="centos"
[2025-10-12 23:04:29] ID_LIKE="rhel fedora"
[2025-10-12 23:04:29] VERSION_ID="7"
[2025-10-12 23:04:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:04:29] ANSI_COLOR="0;31"
[2025-10-12 23:04:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:04:29] HOME_URL="https://www.centos.org/"
[2025-10-12 23:04:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:04:29] 
[2025-10-12 23:04:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:04:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:04:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:04:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:04:29] 
[2025-10-12 23:04:29] 2025-10-13 03:03:56,874 | INFO     | ***************************************
[2025-10-12 23:04:29] 2025-10-13 03:03:57,378 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:04:29] 2025-10-13 03:03:57,407 | INFO     | sufficient remaining disk space (53159657472 B)
[2025-10-12 23:04:29] 2025-10-13 03:03:57,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:04:29] 2025-10-13 03:03:57,408 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:04:29] 2025-10-13 03:03:57,408 | INFO     | update_server=False
[2025-10-12 23:04:29] 2025-10-13 03:03:57,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:04:29] 2025-10-13 03:03:57,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:04:29] 2025-10-13 03:03:57,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:04:29] 2025-10-13 03:03:57,415 | INFO     | aborting loop
[2025-10-12 23:04:29] 2025-10-13 03:03:57,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:04:29] 2025-10-13 03:03:58,193 | INFO     | all data control threads have been joined
[2025-10-12 23:04:29] 2025-10-13 03:03:58,417 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:58,425 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:58,431 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:58,699 | INFO     | all payload control threads have been joined
[2025-10-12 23:04:29] 2025-10-13 03:03:58,804 | INFO     | all job control threads have been joined
[2025-10-12 23:04:29] 2025-10-13 03:03:58,806 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,200 | INFO     | [data] control thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,303 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:04:29] 2025-10-13 03:03:59,427 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,511 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,610 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,706 | INFO     | [payload] control thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,727 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,817 | INFO     | [job] control thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,826 | INFO     | [job] validate thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:03:59,833 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:04:03,397 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:04:08,328 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:04:29] 2025-10-13 03:04:09,334 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:04:29] 2025-10-13 03:04:10,062 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:04:29] 2025-10-13 03:04:11,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650125375296)>', '<ExcThread(monitor, started 140649626064640)>']
[2025-10-12 23:04:29] 2025-10-13 03:04:16,815 | INFO     | all workflow threads have been joined
[2025-10-12 23:04:29] 2025-10-13 03:04:16,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:04:29] 2025-10-13 03:04:16,815 | INFO     | traces error code: 0
[2025-10-12 23:04:29] 2025-10-13 03:04:16,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:04:29] 2025-10-13 03:04:25,176 | INFO     | PID=3422509 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:04:29] 2025-10-13 03:04:25,176 | INFO     | .. there are 7 such processes running
[2025-10-12 23:04:29] 2025-10-13 03:04:25,186 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:04:29] 2025-10-13 03:04:25,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:04:29] 2025-10-13 03:04:25,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:04:29] 2025-10-13 03:04:25,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:04:29] 2025-10-13 03:04:25,186 | INFO     | [monitor] control thread has ended
[2025-10-12 23:04:29] 2025-10-13 03:04:27,364 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:04:29] 2025-10-13 03:04:27,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:04:29] 2025-10-13 03:04:27,464 [wrapper] pilotpid: 3422509
[2025-10-12 23:04:29] 2025-10-13 03:04:27,562 [wrapper] Pilot exit status: 0
[2025-10-12 23:04:29] 2025-10-13 03:04:27,778 [wrapper] pandaids: 6840430329
[2025-10-12 23:04:29] 2025-10-13 03:04:27,959 [wrapper] cleanup supervisor_pilot 3979983 3422510
[2025-10-12 23:04:29] 2025-10-13 03:04:27,964 [wrapper] Test setup, not cleaning
[2025-10-12 23:04:29] 2025-10-13 03:04:27,984 [wrapper] apfmon messages muted
[2025-10-12 23:04:29] 2025-10-13 03:04:28,033 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:04:29] 2025-10-13 03:04:28,142 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:04:29]  *** Error codes and diagnostics ***
[2025-10-12 23:04:29]     "exeErrorCode": 0,
[2025-10-12 23:04:29]     "exeErrorDiag": "",
[2025-10-12 23:04:29]     "pilotErrorCode": 0,
[2025-10-12 23:04:29]     "pilotErrorDiag": "",
[2025-10-12 23:04:29]  *** Listing of results directory ***
[2025-10-12 23:04:29] total 405288
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 23:04:29] -rwx------. 1 boincer umatlas     36292 Oct 12 13:52 runpilot2-wrapper.sh
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:52 queuedata.json
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:04:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:49 run_atlas
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:49 job.xml
[2025-10-12 23:04:29] -rw-r--r--. 2 boincer umatlas 219562347 Oct 12 15:49 EVNT.46676267._003659.pool.root.1
[2025-10-12 23:04:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:49 start_atlas.sh
[2025-10-12 23:04:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:49 shared
[2025-10-12 23:04:29] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 15:49 input.tar.gz
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:49 boinc_lockfile
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:49 pandaJob.out
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas    975536 Oct 12 15:51 agis_schedconf.cvmfs.json
[2025-10-12 23:04:29] drwx------. 5 boincer umatlas      4096 Oct 12 15:51 pilot3
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas      6710 Oct 12 23:01 init_data.xml
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas 183851917 Oct 12 23:02 HITS.46676269._085285.pool.root.1
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas       531 Oct 12 23:02 boinc_task_state.xml
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas        95 Oct 12 23:03 pilot_heartbeat.json
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas      1042 Oct 12 23:03 memory_monitor_summary.json
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas    614899 Oct 12 23:03 log.46676269._085285.job.log.tgz.1
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas      7824 Oct 12 23:03 heartbeat.json
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:04 boinc_mmap_file
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:04 wrapper_checkpoint.txt
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas       822 Oct 12 23:04 pilotlog.txt
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas   3234806 Oct 12 23:04 log.46676269._085285.job.log.1
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas       357 Oct 12 23:04 output.list
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:04 runtime_log
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas   3870720 Oct 12 23:04 result.tar.gz
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 23:04 runtime_log.err
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas       658 Oct 12 23:04 CPTNDmAQFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVbUMDm3AnbWm.diag
[2025-10-12 23:04:29] -rw-r--r--. 1 boincer umatlas     21297 Oct 12 23:04 stderr.txt
[2025-10-12 23:04:29] HITS file was successfully produced:
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas 183851917 Oct 12 23:02 shared/HITS.pool.root.1
[2025-10-12 23:04:29]  *** Contents of shared directory: ***
[2025-10-12 23:04:29] total 398324
[2025-10-12 23:04:29] -rw-r--r--. 2 boincer umatlas 219562347 Oct 12 15:49 ATLAS.root_0
[2025-10-12 23:04:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:49 start_atlas.sh
[2025-10-12 23:04:29] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 15:49 input.tar.gz
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas 183851917 Oct 12 23:02 HITS.pool.root.1
[2025-10-12 23:04:29] -rw-------. 1 boincer umatlas   3870720 Oct 12 23:04 result.tar.gz
23:04:30 (3415842): run_atlas exited; CPU time 53070.683066
23:04:30 (3415842): called boinc_finish(0)

</stderr_txt>
]]>

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