Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:11:15 (1113098): wrapper (7.7.26015): starting
16:11:15 (1113098): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:11:15] Arguments: --nthreads 8
[2025-10-12 16:11:15] Threads: 8
[2025-10-12 16:11:15] Checking for CVMFS
[2025-10-12 16:11:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:11:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:11:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:11:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:11:16] 2.13.2.0 864990 129707 400596 151635 2 373 35462534 40960000 13943 16776704 0 191595791 99.689 163907228 30830 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:11:16] CVMFS is ok
[2025-10-12 16:11:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:11:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:11:16] Further information can be found at the LHC@home message board.
[2025-10-12 16:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:11:16] Checking for apptainer binary...
[2025-10-12 16:11:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:11:16] Running /usr/bin/apptainer --version
[2025-10-12 16:11:16] apptainer version 1.4.3-1.el9
[2025-10-12 16:11:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:11:17] c6-5-37-3.aglt2.org
[2025-10-12 16:11:17] apptainer works
[2025-10-12 16:11:17] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:11:17] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:11:17] Starting ATLAS job with PandaID=6840389930
[2025-10-12 16:11:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:21:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:21:02] 2025-10-13 03:19:55,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:21:02] 2025-10-13 03:19:55,373 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:21:02] 2025-10-13 03:19:55,375 | INFO     | sum of square deviations: 22808403497.303116
[2025-10-12 23:21:02] 2025-10-13 03:19:55,380 | INFO     | sum of deviations: 29693558769.322243
[2025-10-12 23:21:02] 2025-10-13 03:19:55,381 | INFO     | mean x: 1760312827.2959428
[2025-10-12 23:21:02] 2025-10-13 03:19:55,381 | INFO     | mean y: 2106358.4248210024
[2025-10-12 23:21:02] 2025-10-13 03:19:55,381 | INFO     | -- intersect: -2289590752.067122
[2025-10-12 23:21:02] 2025-10-13 03:19:55,381 | INFO     | intersect: -2289590752.067122
[2025-10-12 23:21:02] 2025-10-13 03:19:55,382 | INFO     | chi2: 4.96498240300937
[2025-10-12 23:21:02] 2025-10-13 03:19:55,383 | INFO     | sum of square deviations: 22001570374.359837
[2025-10-12 23:21:02] 2025-10-13 03:19:55,388 | INFO     | sum of deviations: 52113959135.845406
[2025-10-12 23:21:02] 2025-10-13 03:19:55,389 | INFO     | mean x: 1760312674.799517
[2025-10-12 23:21:02] 2025-10-13 03:19:55,389 | INFO     | mean y: 2110549.2270531403
[2025-10-12 23:21:02] 2025-10-13 03:19:55,389 | INFO     | -- intersect: -4167449224.911658
[2025-10-12 23:21:02] 2025-10-13 03:19:55,389 | INFO     | intersect: -4167449224.911658
[2025-10-12 23:21:02] 2025-10-13 03:19:55,390 | INFO     | chi2: 4.21232986438207
[2025-10-12 23:21:02] 2025-10-13 03:19:55,390 | INFO     | current chi2=4.21232986438207 (change=15.159218654452886 %)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,390 | INFO     | right removable region: 413
[2025-10-12 23:21:02] 2025-10-13 03:19:55,391 | INFO     | sum of square deviations: 22001494734.359844
[2025-10-12 23:21:02] 2025-10-13 03:19:55,396 | INFO     | sum of deviations: -71406874721.57246
[2025-10-12 23:21:02] 2025-10-13 03:19:55,396 | INFO     | mean x: 1760312979.799517
[2025-10-12 23:21:02] 2025-10-13 03:19:55,396 | INFO     | mean y: 2125441.137681159
[2025-10-12 23:21:02] 2025-10-13 03:19:55,396 | INFO     | -- intersect: 5715303110.971091
[2025-10-12 23:21:02] 2025-10-13 03:19:55,396 | INFO     | intersect: 5715303110.971091
[2025-10-12 23:21:02] 2025-10-13 03:19:55,397 | INFO     | chi2: 1.8691425180702101
[2025-10-12 23:21:02] 2025-10-13 03:19:55,397 | INFO     | current chi2=1.8691425180702101 (change=62.3534915866512 %)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,398 | INFO     | sum of square deviations: 21213892653.608826
[2025-10-12 23:21:02] 2025-10-13 03:19:55,403 | INFO     | sum of deviations: -113690023297.30566
[2025-10-12 23:21:02] 2025-10-13 03:19:55,403 | INFO     | mean x: 1760313132.2982886
[2025-10-12 23:21:02] 2025-10-13 03:19:55,403 | INFO     | mean y: 2133615.4205378974
[2025-10-12 23:21:02] 2025-10-13 03:19:55,404 | INFO     | -- intersect: 9436047715.45725
[2025-10-12 23:21:02] 2025-10-13 03:19:55,404 | INFO     | intersect: 9436047715.45725
[2025-10-12 23:21:02] 2025-10-13 03:19:55,404 | INFO     | chi2: 1.2817265620748597
[2025-10-12 23:21:02] 2025-10-13 03:19:55,405 | INFO     | current chi2=1.2817265620748597 (change=31.427028721267657 %)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,405 | INFO     | sum of square deviations: 20445264288.15847
[2025-10-12 23:21:02] 2025-10-13 03:19:55,411 | INFO     | sum of deviations: -125100765615.93068
[2025-10-12 23:21:02] 2025-10-13 03:19:55,411 | INFO     | mean x: 1760313284.8019803
[2025-10-12 23:21:02] 2025-10-13 03:19:55,411 | INFO     | mean y: 2135870.913366337
[2025-10-12 23:21:02] 2025-10-13 03:19:55,411 | INFO     | -- intersect: 10773165119.97849
[2025-10-12 23:21:02] 2025-10-13 03:19:55,411 | INFO     | intersect: 10773165119.97849
[2025-10-12 23:21:02] 2025-10-13 03:19:55,412 | INFO     | chi2: 1.2067717039091506
[2025-10-12 23:21:02] 2025-10-13 03:19:55,412 | INFO     | current chi2=1.2067717039091506 (change=5.847960117513065 %)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,412 | INFO     | left removable region: 30
[2025-10-12 23:21:02] 2025-10-13 03:19:55,413 | INFO     | sum of square deviations: 17419726319.258556
[2025-10-12 23:21:02] 2025-10-13 03:19:55,418 | INFO     | sum of deviations: -72100744003.78326
[2025-10-12 23:21:02] 2025-10-13 03:19:55,418 | INFO     | mean x: 1760313559.305483
[2025-10-12 23:21:02] 2025-10-13 03:19:55,419 | INFO     | mean y: 2133910.80156658
[2025-10-12 23:21:02] 2025-10-13 03:19:55,419 | INFO     | -- intersect: 7288121932.642963
[2025-10-12 23:21:02] 2025-10-13 03:19:55,419 | INFO     | intersect: 7288121932.642963
[2025-10-12 23:21:02] 2025-10-13 03:19:55,419 | INFO     | chi2: 0.3739742197386875
[2025-10-12 23:21:02] 2025-10-13 03:19:55,420 | INFO     | -- intersect: 7288121932.642963
[2025-10-12 23:21:02] 2025-10-13 03:19:55,420 | INFO     | current memory leak: -4.14 B/s (using 383 data points, chi2=0.37)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,421 | INFO     | could have reported an average CPU frequency of 2717 MHz (17 samples)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,421 | INFO     | ..............................
[2025-10-12 23:21:02] 2025-10-13 03:19:55,421 | INFO     | . Timing measurements:
[2025-10-12 23:21:02] 2025-10-13 03:19:55,421 | INFO     | . get job = 0 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,422 | INFO     | . initial setup = 4 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,422 | INFO     | . payload setup = 52 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,422 | INFO     | . stage-in = 0 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,422 | INFO     | . payload execution = 25543 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,422 | INFO     | . stage-out = 2 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,422 | INFO     | . log creation = 0 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,422 | INFO     | ..............................
[2025-10-12 23:21:02] 2025-10-13 03:19:55,555 | INFO     | 
[2025-10-12 23:21:02] 2025-10-13 03:19:55,556 | INFO     | job summary report
[2025-10-12 23:21:02] 2025-10-13 03:19:55,556 | INFO     | --------------------------------------------------
[2025-10-12 23:21:02] 2025-10-13 03:19:55,556 | INFO     | PanDA job id: 6840389930
[2025-10-12 23:21:02] 2025-10-13 03:19:55,559 | INFO     | task id: 46676269
[2025-10-12 23:21:02] 2025-10-13 03:19:55,559 | INFO     | errors: (none)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:21:02] 2025-10-13 03:19:55,559 | INFO     | pilot state: finished 
[2025-10-12 23:21:02] 2025-10-13 03:19:55,559 | INFO     | transexitcode: 0
[2025-10-12 23:21:02] 2025-10-13 03:19:55,560 | INFO     | exeerrorcode: 0
[2025-10-12 23:21:02] 2025-10-13 03:19:55,560 | INFO     | exeerrordiag: 
[2025-10-12 23:21:02] 2025-10-13 03:19:55,560 | INFO     | exitcode: 0
[2025-10-12 23:21:02] 2025-10-13 03:19:55,560 | INFO     | exitmsg: OK
[2025-10-12 23:21:02] 2025-10-13 03:19:55,560 | INFO     | cpuconsumptiontime: 46898 s
[2025-10-12 23:21:02] 2025-10-13 03:19:55,560 | INFO     | nevents: 400
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | neventsw: 0
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | pid: 1135925
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | pgrp: 1135925
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | corecount: 8
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | event service: False
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | sizes: {0: 2348636, 1: 2348835, 12: 2348835, 23: 2348863, 31: 2349153, 34: 2349181, 25599: 2385324, 25602: 2394378, 25608: 2394580}
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | --------------------------------------------------
[2025-10-12 23:21:02] 2025-10-13 03:19:55,561 | INFO     | 
[2025-10-12 23:21:02] 2025-10-13 03:19:55,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:21:02] 2025-10-13 03:19:55,585 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,586 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,586 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,587 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,591 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,591 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,591 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,591 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:21:02] 2025-10-13 03:19:55,592 | INFO     | job 6840389930 has completed (purged errors)
[2025-10-12 23:21:02] 2025-10-13 03:19:55,592 | INFO     | overall cleanup function is called
[2025-10-12 23:21:02] 2025-10-13 03:19:55,909 | INFO     | PID=1118577 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 23:21:02] 2025-10-13 03:19:55,910 | INFO     | .. there are 20 such processes running
[2025-10-12 23:21:02] 2025-10-13 03:19:56,601 | INFO     | --- collectZombieJob: --- 10, [1135925]
[2025-10-12 23:21:02] 2025-10-13 03:19:56,601 | INFO     | zombie collector waiting for pid 1135925
[2025-10-12 23:21:02] 2025-10-13 03:19:56,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:21:02] 2025-10-13 03:19:56,601 | INFO     | collected zombie processes
[2025-10-12 23:21:02] 2025-10-13 03:19:56,601 | INFO     | will attempt to kill all subprocesses of pid=1135925
[2025-10-12 23:21:02] 2025-10-13 03:19:56,897 | INFO     | process IDs to be killed: [1135925] (in reverse order)
[2025-10-12 23:21:02] 2025-10-13 03:19:56,995 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:21:02] 2025-10-13 03:19:56,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:21:02] 2025-10-13 03:19:57,012 | INFO     | did not find any defunct processes belonging to 1135925
[2025-10-12 23:21:02] 2025-10-13 03:19:57,027 | INFO     | did not find any defunct processes belonging to 1135925
[2025-10-12 23:21:02] 2025-10-13 03:19:57,028 | INFO     | ready for new job
[2025-10-12 23:21:02] 2025-10-13 03:19:57,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:21:02] 2025-10-13 03:19:57,031 | INFO     | ***************************************
[2025-10-12 23:21:02] 2025-10-13 03:19:57,031 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:21:02] 2025-10-13 03:19:57,032 | INFO     | ***************************************
[2025-10-12 23:21:02] 2025-10-13 03:19:57,032 | INFO     | 
[2025-10-12 23:21:02] 2025-10-13 03:19:57,047 | INFO     | architecture information:
[2025-10-12 23:21:02] 2025-10-13 03:19:57,047 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:21:02] 2025-10-13 03:19:57,067 | INFO     | cat /etc/os-release:
[2025-10-12 23:21:02] NAME="CentOS Linux"
[2025-10-12 23:21:02] VERSION="7 (Core)"
[2025-10-12 23:21:02] ID="centos"
[2025-10-12 23:21:02] ID_LIKE="rhel fedora"
[2025-10-12 23:21:02] VERSION_ID="7"
[2025-10-12 23:21:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:21:02] ANSI_COLOR="0;31"
[2025-10-12 23:21:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:21:02] HOME_URL="https://www.centos.org/"
[2025-10-12 23:21:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:21:02] 
[2025-10-12 23:21:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:21:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:21:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:21:02] 
[2025-10-12 23:21:02] 2025-10-13 03:19:57,067 | INFO     | ***************************************
[2025-10-12 23:21:02] 2025-10-13 03:19:57,570 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:21:02] 2025-10-13 03:19:57,590 | INFO     | sufficient remaining disk space (74599890944 B)
[2025-10-12 23:21:02] 2025-10-13 03:19:57,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:21:02] 2025-10-13 03:19:57,590 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:21:02] 2025-10-13 03:19:57,591 | INFO     | update_server=False
[2025-10-12 23:21:02] 2025-10-13 03:19:57,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:21:02] 2025-10-13 03:19:57,634 | INFO     | all data control threads have been joined
[2025-10-12 23:21:02] 2025-10-13 03:19:58,032 | INFO     | all job control threads have been joined
[2025-10-12 23:21:02] 2025-10-13 03:19:58,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:21:02] 2025-10-13 03:19:58,241 | INFO     | aborting loop
[2025-10-12 23:21:02] 2025-10-13 03:19:58,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:21:02] 2025-10-13 03:19:58,597 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:58,639 | INFO     | [data] control thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:58,742 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:58,852 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,038 | INFO     | [job] control thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,085 | INFO     | all payload control threads have been joined
[2025-10-12 23:21:02] 2025-10-13 03:19:59,243 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,246 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,488 | INFO     | [job] validate thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,497 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,802 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:19:59,986 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:20:00,091 | INFO     | [payload] control thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:20:00,316 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:20:00,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:21:02] 2025-10-13 03:20:00,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:21:02] 2025-10-13 03:20:01,570 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:20:04,942 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:21:02] 2025-10-13 03:20:28,377 | INFO     | PID=1118577 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:21:02] 2025-10-13 03:20:28,378 | INFO     | .. there are 20 such processes running
[2025-10-12 23:21:02] 2025-10-13 03:20:28,378 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:21:02] 2025-10-13 03:20:28,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:21:02] 2025-10-13 03:20:28,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:21:02] 2025-10-13 03:20:55,014 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:21:02] 2025-10-13 03:20:56,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139937117296448)>', '<ExcThread(monitor, started 139936401450752)>']
[2025-10-12 23:21:02] 2025-10-13 03:20:56,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:21:02] 2025-10-13 03:20:56,542 | INFO     | [monitor] control thread has ended
[2025-10-12 23:21:02] 2025-10-13 03:21:01,062 | INFO     | all workflow threads have been joined
[2025-10-12 23:21:02] 2025-10-13 03:21:01,063 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:21:02] 2025-10-13 03:21:01,063 | INFO     | traces error code: 0
[2025-10-12 23:21:02] 2025-10-13 03:21:01,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:21:02] 2025-10-13 03:21:01,581 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:21:02] 2025-10-13 03:21:01,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:21:02] 2025-10-13 03:21:01,626 [wrapper] pilotpid: 1118577
[2025-10-12 23:21:02] 2025-10-13 03:21:01,651 [wrapper] Pilot exit status: 0
[2025-10-12 23:21:02] 2025-10-13 03:21:01,783 [wrapper] pandaids: 6840389930
[2025-10-12 23:21:02] 2025-10-13 03:21:01,879 [wrapper] cleanup supervisor_pilot 2246631 1118578
[2025-10-12 23:21:02] 2025-10-13 03:21:01,884 [wrapper] Test setup, not cleaning
[2025-10-12 23:21:02] 2025-10-13 03:21:01,888 [wrapper] apfmon messages muted
[2025-10-12 23:21:02] 2025-10-13 03:21:01,892 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:21:02] 2025-10-13 03:21:01,897 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:21:02]  *** Error codes and diagnostics ***
[2025-10-12 23:21:02]     "exeErrorCode": 0,
[2025-10-12 23:21:02]     "exeErrorDiag": "",
[2025-10-12 23:21:02]     "pilotErrorCode": 0,
[2025-10-12 23:21:02]     "pilotErrorDiag": "",
[2025-10-12 23:21:02]  *** Listing of results directory ***
[2025-10-12 23:21:02] total 416396
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 23:21:02] -rwx------. 1 boincer umatlas     36292 Oct 12 12:05 runpilot2-wrapper.sh
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:05 queuedata.json
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:21:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:11 run_atlas
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:11 job.xml
[2025-10-12 23:21:02] -rw-r--r--. 2 boincer umatlas 219790100 Oct 12 16:11 EVNT.46676267._001472.pool.root.1
[2025-10-12 23:21:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:11 shared
[2025-10-12 23:21:02] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 16:11 input.tar.gz
[2025-10-12 23:21:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:11 start_atlas.sh
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:11 boinc_lockfile
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:11 pandaJob.out
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas    975536 Oct 12 16:12 agis_schedconf.cvmfs.json
[2025-10-12 23:21:02] drwx------. 5 boincer umatlas      4096 Oct 12 16:12 pilot3
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas 195045889 Oct 12 23:19 HITS.46676269._083056.pool.root.1
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas       531 Oct 12 23:19 boinc_task_state.xml
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas        95 Oct 12 23:19 pilot_heartbeat.json
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas      1040 Oct 12 23:19 memory_monitor_summary.json
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas    594889 Oct 12 23:19 log.46676269._083056.job.log.tgz.1
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas      7825 Oct 12 23:19 heartbeat.json
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 23:20 init_data.xml
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:20 boinc_mmap_file
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:21 wrapper_checkpoint.txt
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas      4824 Oct 12 23:21 pilotlog.txt
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas   3231222 Oct 12 23:21 log.46676269._083056.job.log.1
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas       357 Oct 12 23:21 output.list
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:21 runtime_log
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas   3840000 Oct 12 23:21 result.tar.gz
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 23:21 runtime_log.err
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas       659 Oct 12 23:21 Mf6KDmZkDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxYkNDmxJalgm.diag
[2025-10-12 23:21:02] -rw-r--r--. 1 boincer umatlas     21109 Oct 12 23:21 stderr.txt
[2025-10-12 23:21:02] HITS file was successfully produced:
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas 195045889 Oct 12 23:19 shared/HITS.pool.root.1
[2025-10-12 23:21:02]  *** Contents of shared directory: ***
[2025-10-12 23:21:02] total 409452
[2025-10-12 23:21:02] -rw-r--r--. 2 boincer umatlas 219790100 Oct 12 16:11 ATLAS.root_0
[2025-10-12 23:21:02] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 16:11 input.tar.gz
[2025-10-12 23:21:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:11 start_atlas.sh
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas 195045889 Oct 12 23:19 HITS.pool.root.1
[2025-10-12 23:21:02] -rw-------. 1 boincer umatlas   3840000 Oct 12 23:21 result.tar.gz
23:21:03 (1113098): run_atlas exited; CPU time 47621.355536
23:21:03 (1113098): called boinc_finish(0)

</stderr_txt>
]]>

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