Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:28:57 (2496468): wrapper (7.7.26015): starting
15:28:57 (2496468): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:28:57] Arguments: --nthreads 8
[2025-10-12 15:28:57] Threads: 8
[2025-10-12 15:28:57] Checking for CVMFS
[2025-10-12 15:28:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:28:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:28:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:28:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:28:58] 2.13.2.0 100689 138534 600888 151633 1 560 22118019 32935937 52292 16776704 0 618269846 99.671 547316039 19033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:28:58] CVMFS is ok
[2025-10-12 15:28:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:28:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:28:58] Further information can be found at the LHC@home message board.
[2025-10-12 15:28:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:28:58] Checking for apptainer binary...
[2025-10-12 15:28:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:28:58] Running /usr/bin/apptainer --version
[2025-10-12 15:28:58] apptainer version 1.4.3-1.el9
[2025-10-12 15:28:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:28:59] c7-2-38.aglt2.org
[2025-10-12 15:28:59] apptainer works
[2025-10-12 15:28:59] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:28:59] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:28:59] Starting ATLAS job with PandaID=6840224735
[2025-10-12 15:28:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:06:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:06:55] 2025-10-12 21:05:46,274 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:06:55] 2025-10-12 21:05:46,274 | INFO     | summary of transferred files:
[2025-10-12 17:06:55] 2025-10-12 21:05:46,274 | INFO     |  -- lfn=log.46676269._082030.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:06:55] 2025-10-12 21:05:46,275 | INFO     | stage-out finished correctly
[2025-10-12 17:06:55] 2025-10-12 21:05:46,438 | INFO     | PID=2507200 has CPU usage=16.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 17:06:55] 2025-10-12 21:05:46,438 | INFO     | .. there are 78 such processes running
[2025-10-12 17:06:55] 2025-10-12 21:05:47,439 | INFO     | time since job start (5770s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:05:47,461 | INFO     | monitor loop #366: job 0:6840224735 is in state 'finished'
[2025-10-12 17:06:55] 2025-10-12 21:05:47,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:55] 2025-10-12 21:05:47,940 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:06:55] 2025-10-12 21:05:49,454 | INFO     | time since job start (5772s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:05:49,669 | INFO     | job 6840224735 has state=finished
[2025-10-12 17:06:55] 2025-10-12 21:05:49,669 | INFO     | preparing for final server update for job 6840224735 in state='finished'
[2025-10-12 17:06:55] 2025-10-12 21:05:49,670 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:06:55] 2025-10-12 21:05:49,670 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:06:55] 2025-10-12 21:05:49,670 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:06:55] 2025-10-12 21:05:49,670 | INFO     | job 6840224735 has finished - writing final server update
[2025-10-12 17:06:55] 2025-10-12 21:05:49,670 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:06:55] 2025-10-12 21:05:49,683 | INFO     | executing command: lscpu
[2025-10-12 17:06:55] 2025-10-12 21:05:49,885 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:06:55] 2025-10-12 21:05:49,974 | INFO     | monitor loop #367: job 0:6840224735 is in state 'finished'
[2025-10-12 17:06:55] 2025-10-12 21:05:49,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:55] 2025-10-12 21:05:51,467 | INFO     | time since job start (5774s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:05:52,481 | INFO     | monitor loop #368: job 0:6840224735 is in state 'finished'
[2025-10-12 17:06:55] 2025-10-12 21:05:52,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:55] 2025-10-12 21:05:53,474 | INFO     | time since job start (5776s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:05:54,991 | INFO     | monitor loop #369: job 0:6840224735 is in state 'finished'
[2025-10-12 17:06:55] 2025-10-12 21:05:54,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:55] 2025-10-12 21:05:55,497 | INFO     | time since job start (5778s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:05:57,502 | INFO     | time since job start (5780s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:05:57,506 | INFO     | monitor loop #370: job 0:6840224735 is in state 'finished'
[2025-10-12 17:06:55] 2025-10-12 21:05:57,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:55] 2025-10-12 21:05:59,509 | INFO     | time since job start (5782s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:06:00,012 | INFO     | monitor loop #371: job 0:6840224735 is in state 'finished'
[2025-10-12 17:06:55] 2025-10-12 21:06:00,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,531 | INFO     | time since job start (5784s) is within the limit (172800.0s)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,788 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:06:55] 2025-10-12 21:06:01,802 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3570.1029166666663
[2025-10-12 17:06:55] 2025-10-12 21:06:01,816 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840224735/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,817 | INFO     | extracted standard info from prmon json
[2025-10-12 17:06:55] 2025-10-12 21:06:01,817 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:06:55] 2025-10-12 21:06:01,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:06:55] 2025-10-12 21:06:01,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:06:55] 2025-10-12 21:06:01,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:06:55] 2025-10-12 21:06:01,819 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:06:55] 2025-10-12 21:06:01,819 | INFO     | sum of square deviations: 204162974.9885056
[2025-10-12 17:06:55] 2025-10-12 21:06:01,819 | INFO     | sum of deviations: -17838493898.27586
[2025-10-12 17:06:55] 2025-10-12 21:06:01,819 | INFO     | mean x: 1760300368.0114942
[2025-10-12 17:06:55] 2025-10-12 21:06:01,819 | INFO     | mean y: 2334726.275862069
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | -- intersect: 153806458004.13107
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | intersect: 153806458004.13107
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | chi2: 0.2639899175929558
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | -- intersect: 153806458004.13107
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | current memory leak: -87.37 B/s (using 87 data points, chi2=0.26)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | could have reported an average CPU frequency of 3549 MHz (7 samples)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | ..............................
[2025-10-12 17:06:55] 2025-10-12 21:06:01,820 | INFO     | . Timing measurements:
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | . get job = 0 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | . initial setup = 4 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | . payload setup = 15 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | . stage-in = 0 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | . payload execution = 5709 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | . stage-out = 1 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | . log creation = 0 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,821 | INFO     | ..............................
[2025-10-12 17:06:55] 2025-10-12 21:06:01,883 | INFO     | 
[2025-10-12 17:06:55] 2025-10-12 21:06:01,883 | INFO     | job summary report
[2025-10-12 17:06:55] 2025-10-12 21:06:01,883 | INFO     | --------------------------------------------------
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | PanDA job id: 6840224735
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | task id: 46676269
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | errors: (none)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | pilot state: finished 
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | transexitcode: 0
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | exeerrorcode: 0
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | exeerrordiag: 
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | exitcode: 0
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | exitmsg: OK
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | cpuconsumptiontime: 29543 s
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | nevents: 400
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | neventsw: 0
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | pid: 2528066
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | pgrp: 2528066
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | corecount: 8
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | event service: False
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | sizes: {0: 2348856, 11: 2348856, 14: 2349146, 22: 2349174, 5729: 2375741, 5731: 2384739, 5733: 2384923, 5747: 2385117}
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | --------------------------------------------------
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | 
[2025-10-12 17:06:55] 2025-10-12 21:06:01,884 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:06:55] 2025-10-12 21:06:01,911 | INFO     | job 6840224735 has completed (purged errors)
[2025-10-12 17:06:55] 2025-10-12 21:06:01,911 | INFO     | overall cleanup function is called
[2025-10-12 17:06:55] 2025-10-12 21:06:02,921 | INFO     | --- collectZombieJob: --- 10, [2528066]
[2025-10-12 17:06:55] 2025-10-12 21:06:02,921 | INFO     | zombie collector waiting for pid 2528066
[2025-10-12 17:06:55] 2025-10-12 21:06:02,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:06:55] 2025-10-12 21:06:02,921 | INFO     | collected zombie processes
[2025-10-12 17:06:55] 2025-10-12 21:06:02,921 | INFO     | will attempt to kill all subprocesses of pid=2528066
[2025-10-12 17:06:55] 2025-10-12 21:06:03,564 | INFO     | process IDs to be killed: [2528066] (in reverse order)
[2025-10-12 17:06:55] 2025-10-12 21:06:03,776 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:06:55] 2025-10-12 21:06:03,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:06:55] 2025-10-12 21:06:03,806 | INFO     | did not find any defunct processes belonging to 2528066
[2025-10-12 17:06:55] 2025-10-12 21:06:03,836 | INFO     | did not find any defunct processes belonging to 2528066
[2025-10-12 17:06:55] 2025-10-12 21:06:03,836 | INFO     | ready for new job
[2025-10-12 17:06:55] 2025-10-12 21:06:03,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:06:55] 2025-10-12 21:06:03,837 | INFO     | ***************************************
[2025-10-12 17:06:55] 2025-10-12 21:06:03,837 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:06:55] 2025-10-12 21:06:03,837 | INFO     | ***************************************
[2025-10-12 17:06:55] 2025-10-12 21:06:03,838 | INFO     | 
[2025-10-12 17:06:55] 2025-10-12 21:06:03,855 | INFO     | architecture information:
[2025-10-12 17:06:55] 2025-10-12 21:06:03,855 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:06:55] 2025-10-12 21:06:03,872 | INFO     | cat /etc/os-release:
[2025-10-12 17:06:55] NAME="CentOS Linux"
[2025-10-12 17:06:55] VERSION="7 (Core)"
[2025-10-12 17:06:55] ID="centos"
[2025-10-12 17:06:55] ID_LIKE="rhel fedora"
[2025-10-12 17:06:55] VERSION_ID="7"
[2025-10-12 17:06:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:06:55] ANSI_COLOR="0;31"
[2025-10-12 17:06:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:06:55] HOME_URL="https://www.centos.org/"
[2025-10-12 17:06:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:06:55] 
[2025-10-12 17:06:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:06:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:06:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:06:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:06:55] 
[2025-10-12 17:06:55] 2025-10-12 21:06:03,872 | INFO     | ***************************************
[2025-10-12 17:06:55] 2025-10-12 21:06:04,373 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:06:55] 2025-10-12 21:06:04,387 | INFO     | sufficient remaining disk space (73536634880 B)
[2025-10-12 17:06:55] 2025-10-12 21:06:04,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:06:55] 2025-10-12 21:06:04,387 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:06:55] 2025-10-12 21:06:04,387 | INFO     | update_server=False
[2025-10-12 17:06:55] 2025-10-12 21:06:04,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:06:55] 2025-10-12 21:06:04,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:06:55] 2025-10-12 21:06:04,388 | INFO     | aborting loop
[2025-10-12 17:06:55] 2025-10-12 21:06:04,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:06:55] 2025-10-12 21:06:04,630 | INFO     | all payload control threads have been joined
[2025-10-12 17:06:55] 2025-10-12 21:06:04,691 | INFO     | all data control threads have been joined
[2025-10-12 17:06:55] 2025-10-12 21:06:05,397 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:05,398 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:05,513 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:05,635 | INFO     | [payload] control thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:05,698 | INFO     | [data] control thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:05,929 | INFO     | all job control threads have been joined
[2025-10-12 17:06:55] 2025-10-12 21:06:05,941 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,055 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,215 | INFO     | [job] validate thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,240 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,470 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,597 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,743 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:06,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:06:55] 2025-10-12 21:06:06,936 | INFO     | [job] control thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:07,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:06:55] 2025-10-12 21:06:07,918 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:11,614 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:06:55] 2025-10-12 21:06:36,347 | INFO     | PID=2507200 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:06:55] 2025-10-12 21:06:36,350 | INFO     | .. there are 78 such processes running
[2025-10-12 17:06:55] 2025-10-12 21:06:36,351 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:06:55] 2025-10-12 21:06:36,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:06:55] 2025-10-12 21:06:36,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:06:55] 2025-10-12 21:06:47,132 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:06:55] 2025-10-12 21:06:48,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819920471872)>', '<ExcThread(monitor, started 139819439093504)>']
[2025-10-12 17:06:55] 2025-10-12 21:06:49,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:06:55] 2025-10-12 21:06:49,433 | INFO     | [monitor] control thread has ended
[2025-10-12 17:06:55] 2025-10-12 21:06:53,624 | INFO     | all workflow threads have been joined
[2025-10-12 17:06:55] 2025-10-12 21:06:53,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:06:55] 2025-10-12 21:06:53,624 | INFO     | traces error code: 0
[2025-10-12 17:06:55] 2025-10-12 21:06:53,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:06:55] 2025-10-12 21:06:53,977 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:06:55] 2025-10-12 21:06:53,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:06:55] 2025-10-12 21:06:54,007 [wrapper] pilotpid: 2507200
[2025-10-12 17:06:55] 2025-10-12 21:06:54,015 [wrapper] Pilot exit status: 0
[2025-10-12 17:06:55] 2025-10-12 21:06:54,082 [wrapper] pandaids: 6840224735
[2025-10-12 17:06:55] 2025-10-12 21:06:54,237 [wrapper] cleanup supervisor_pilot 3832203 2507201
[2025-10-12 17:06:55] 2025-10-12 21:06:54,260 [wrapper] Test setup, not cleaning
[2025-10-12 17:06:55] 2025-10-12 21:06:54,304 [wrapper] apfmon messages muted
[2025-10-12 17:06:55] 2025-10-12 21:06:54,346 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:06:55] 2025-10-12 21:06:54,363 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:06:55]  *** Error codes and diagnostics ***
[2025-10-12 17:06:55]     "exeErrorCode": 0,
[2025-10-12 17:06:55]     "exeErrorDiag": "",
[2025-10-12 17:06:55]     "pilotErrorCode": 0,
[2025-10-12 17:06:55]     "pilotErrorDiag": "",
[2025-10-12 17:06:55]  *** Listing of results directory ***
[2025-10-12 17:06:55] total 408376
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 17:06:55] -rwx------. 1 boincer umatlas     36292 Oct 12 11:17 runpilot2-wrapper.sh
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:17 queuedata.json
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:06:55] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:28 run_atlas
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:28 job.xml
[2025-10-12 17:06:55] -rw-r--r--. 2 boincer umatlas 219568459 Oct 12 15:28 EVNT.46676267._004563.pool.root.1
[2025-10-12 17:06:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:28 start_atlas.sh
[2025-10-12 17:06:55] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:28 shared
[2025-10-12 17:06:55] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:28 input.tar.gz
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:28 boinc_lockfile
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 15:28 pandaJob.out
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas    975528 Oct 12 15:29 agis_schedconf.cvmfs.json
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:06:55] drwx------. 5 boincer umatlas      4096 Oct 12 15:29 pilot3
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas      6934 Oct 12 17:00 init_data.xml
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas 192464797 Oct 12 17:05 HITS.46676269._082030.pool.root.1
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas       530 Oct 12 17:05 boinc_task_state.xml
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas      1033 Oct 12 17:05 memory_monitor_summary.json
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas    345664 Oct 12 17:05 log.46676269._082030.job.log.tgz.1
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas      7778 Oct 12 17:06 heartbeat.json
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas        95 Oct 12 17:06 pilot_heartbeat.json
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:06 boinc_mmap_file
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas      4824 Oct 12 17:06 pilotlog.txt
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas        27 Oct 12 17:06 wrapper_checkpoint.txt
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas    772870 Oct 12 17:06 log.46676269._082030.job.log.1
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas       357 Oct 12 17:06 output.list
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:06 runtime_log
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas   1136640 Oct 12 17:06 result.tar.gz
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 17:06 runtime_log.err
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas       651 Oct 12 17:06 4jTNDmJ0CS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLFUMDmxyhDzm.diag
[2025-10-12 17:06:55] -rw-r--r--. 1 boincer umatlas     22293 Oct 12 17:06 stderr.txt
[2025-10-12 17:06:55] HITS file was successfully produced:
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas 192464797 Oct 12 17:05 shared/HITS.pool.root.1
[2025-10-12 17:06:55]  *** Contents of shared directory: ***
[2025-10-12 17:06:55] total 404076
[2025-10-12 17:06:55] -rw-r--r--. 2 boincer umatlas 219568459 Oct 12 15:28 ATLAS.root_0
[2025-10-12 17:06:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:28 start_atlas.sh
[2025-10-12 17:06:55] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:28 input.tar.gz
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas 192464797 Oct 12 17:05 HITS.pool.root.1
[2025-10-12 17:06:55] -rw-------. 1 boincer umatlas   1136640 Oct 12 17:06 result.tar.gz
17:06:56 (2496468): run_atlas exited; CPU time 29849.177286
17:06:56 (2496468): called boinc_finish(0)

</stderr_txt>
]]>

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