Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:09:50 (12314): wrapper (7.7.26015): starting
15:09:50 (12314): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 15:09:50] Arguments: --nthreads 12
[2025-10-12 15:09:50] Threads: 12
[2025-10-12 15:09:50] Checking for CVMFS
[2025-10-12 15:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:09:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:09:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:09:50] 2.11.2.0 2925 223283 101064 151633 1 57 16523613 20275200 1 130560 1 110429431 99.984 13313710 12641 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:09:50] CVMFS is ok
[2025-10-12 15:09:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:09:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:09:50] Further information can be found at the LHC@home message board.
[2025-10-12 15:09:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:09:50] Checking for apptainer binary...
[2025-10-12 15:09:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:09:50] Running /usr/bin/apptainer --version
[2025-10-12 15:09:50] apptainer version 1.3.2-1.el7
[2025-10-12 15:09:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:09:52] c-205-9.aglt2.org
[2025-10-12 15:09:52] apptainer works
[2025-10-12 15:09:52] Set ATHENA_PROC_NUMBER=12
[2025-10-12 15:09:52] Set ATHENA_CORE_NUMBER=12
[2025-10-12 15:09:52] Starting ATLAS job with PandaID=6840225442
[2025-10-12 15:09:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:20:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:20:33]  storage_token=
[2025-10-12 16:20:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840225442/log.46676269._082509.job.log.tgz.1
[2025-10-12 16:20:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/72/log.46676269._082509.job.log.tgz.1
[2025-10-12 16:20:33]  workdir=None
[2025-10-12 16:20:33] ]
[2025-10-12 16:20:33] 2025-10-12 20:19:51,040 | INFO     | transferring file log.46676269._082509.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840225442/log.46676269._082509.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 16:20:33] 2025-10-12 20:19:51,041 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840225442/log.46676269._082509.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._082509.job
[2025-10-12 16:20:33] 2025-10-12 20:19:51,064 | INFO     | adding to output.list: log.46676269._082509.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/72/log.46676269._082509.job.log.tg
[2025-10-12 16:20:33] 2025-10-12 20:19:51,065 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:20:33] 2025-10-12 20:19:51,065 | INFO     | summary of transferred files:
[2025-10-12 16:20:33] 2025-10-12 20:19:51,065 | INFO     |  -- lfn=log.46676269._082509.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:20:33] 2025-10-12 20:19:51,066 | INFO     | stage-out finished correctly
[2025-10-12 16:20:33] 2025-10-12 20:19:51,697 | INFO     | time since job start (4184s) is within the limit (172800.0s)
[2025-10-12 16:20:33] 2025-10-12 20:19:52,385 | INFO     | monitor loop #311: job 0:6840225442 is in state 'finished'
[2025-10-12 16:20:33] 2025-10-12 20:19:52,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:20:33] 2025-10-12 20:19:53,703 | INFO     | time since job start (4186s) is within the limit (172800.0s)
[2025-10-12 16:20:33] 2025-10-12 20:19:54,588 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:20:33] 2025-10-12 20:19:54,888 | INFO     | monitor loop #312: job 0:6840225442 is in state 'finished'
[2025-10-12 16:20:33] 2025-10-12 20:19:54,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:20:33] 2025-10-12 20:19:55,708 | INFO     | time since job start (4188s) is within the limit (172800.0s)
[2025-10-12 16:20:33] 2025-10-12 20:19:56,620 | INFO     | job 6840225442 has state=finished
[2025-10-12 16:20:33] 2025-10-12 20:19:56,620 | INFO     | preparing for final server update for job 6840225442 in state='finished'
[2025-10-12 16:20:33] 2025-10-12 20:19:56,621 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:20:33] 2025-10-12 20:19:56,621 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:20:33] 2025-10-12 20:19:56,621 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:20:33] 2025-10-12 20:19:56,621 | INFO     | job 6840225442 has finished - writing final server update
[2025-10-12 16:20:33] 2025-10-12 20:19:56,622 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:20:33] 2025-10-12 20:19:56,623 | INFO     | executing command: lscpu
[2025-10-12 16:20:33] 2025-10-12 20:19:56,650 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:20:33] 2025-10-12 20:19:57,391 | INFO     | monitor loop #313: job 0:6840225442 is in state 'finished'
[2025-10-12 16:20:33] 2025-10-12 20:19:57,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:20:33] 2025-10-12 20:19:57,713 | INFO     | time since job start (4190s) is within the limit (172800.0s)
[2025-10-12 16:20:33] 2025-10-12 20:19:59,718 | INFO     | time since job start (4192s) is within the limit (172800.0s)
[2025-10-12 16:20:33] 2025-10-12 20:19:59,895 | INFO     | monitor loop #314: job 0:6840225442 is in state 'finished'
[2025-10-12 16:20:33] 2025-10-12 20:19:59,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:20:33] 2025-10-12 20:20:00,841 | INFO     | PID=16106 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:20:33] 2025-10-12 20:20:01,504 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 16:20:33] 2025-10-12 20:20:01,508 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1917.5
[2025-10-12 16:20:33] 2025-10-12 20:20:01,510 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840225442/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:20:33] 2025-10-12 20:20:01,511 | INFO     | extracted standard info from prmon json
[2025-10-12 16:20:33] 2025-10-12 20:20:01,511 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:20:33] 2025-10-12 20:20:01,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:20:33] 2025-10-12 20:20:01,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:20:33] 2025-10-12 20:20:01,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:20:33] 2025-10-12 20:20:01,513 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:20:33] 2025-10-12 20:20:01,513 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 16:20:33] 2025-10-12 20:20:01,514 | INFO     | sum of deviations: -4593640624.0
[2025-10-12 16:20:33] 2025-10-12 20:20:01,514 | INFO     | mean x: 1760298401.5
[2025-10-12 16:20:33] 2025-10-12 20:20:01,514 | INFO     | mean y: 2728382.419354839
[2025-10-12 16:20:33] 2025-10-12 20:20:01,514 | INFO     | -- intersect: 109449463947.88309
[2025-10-12 16:20:33] 2025-10-12 20:20:01,514 | INFO     | intersect: 109449463947.88309
[2025-10-12 16:20:33] 2025-10-12 20:20:01,515 | INFO     | chi2: 0.07764098811999268
[2025-10-12 16:20:33] 2025-10-12 20:20:01,515 | INFO     | -- intersect: 109449463947.88309
[2025-10-12 16:20:33] 2025-10-12 20:20:01,515 | INFO     | current memory leak: -62.18 B/s (using 62 data points, chi2=0.08)
[2025-10-12 16:20:33] 2025-10-12 20:20:01,515 | INFO     | could have reported an average CPU frequency of 2076 MHz (6 samples)
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | ..............................
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | . Timing measurements:
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | . get job = 0 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | . initial setup = 2 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | . payload setup = 7 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | . stage-in = 0 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | . payload execution = 4156 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,516 | INFO     | . stage-out = 0 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,517 | INFO     | . log creation = 0 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,517 | INFO     | ..............................
[2025-10-12 16:20:33] 2025-10-12 20:20:01,601 | INFO     | 
[2025-10-12 16:20:33] 2025-10-12 20:20:01,601 | INFO     | job summary report
[2025-10-12 16:20:33] 2025-10-12 20:20:01,601 | INFO     | --------------------------------------------------
[2025-10-12 16:20:33] 2025-10-12 20:20:01,601 | INFO     | PanDA job id: 6840225442
[2025-10-12 16:20:33] 2025-10-12 20:20:01,602 | INFO     | task id: 46676269
[2025-10-12 16:20:33] 2025-10-12 20:20:01,602 | INFO     | errors: (none)
[2025-10-12 16:20:33] 2025-10-12 20:20:01,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:20:33] 2025-10-12 20:20:01,602 | INFO     | pilot state: finished 
[2025-10-12 16:20:33] 2025-10-12 20:20:01,602 | INFO     | transexitcode: 0
[2025-10-12 16:20:33] 2025-10-12 20:20:01,602 | INFO     | exeerrorcode: 0
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | exeerrordiag: 
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | exitcode: 0
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | exitmsg: OK
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | cpuconsumptiontime: 44863 s
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | nevents: 400
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | neventsw: 0
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | pid: 23371
[2025-10-12 16:20:33] 2025-10-12 20:20:01,603 | INFO     | pgrp: 23371
[2025-10-12 16:20:33] 2025-10-12 20:20:01,604 | INFO     | corecount: 12
[2025-10-12 16:20:33] 2025-10-12 20:20:01,604 | INFO     | event service: False
[2025-10-12 16:20:33] 2025-10-12 20:20:01,604 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4167: 2375043, 4168: 2384041, 4172: 2384097, 4179: 2384419}
[2025-10-12 16:20:33] 2025-10-12 20:20:01,604 | INFO     | --------------------------------------------------
[2025-10-12 16:20:33] 2025-10-12 20:20:01,604 | INFO     | 
[2025-10-12 16:20:33] 2025-10-12 20:20:01,604 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:20:33] 2025-10-12 20:20:01,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | job 6840225442 has completed (purged errors)
[2025-10-12 16:20:33] 2025-10-12 20:20:01,630 | INFO     | overall cleanup function is called
[2025-10-12 16:20:33] 2025-10-12 20:20:02,638 | INFO     | --- collectZombieJob: --- 10, [23371]
[2025-10-12 16:20:33] 2025-10-12 20:20:02,639 | INFO     | zombie collector waiting for pid 23371
[2025-10-12 16:20:33] 2025-10-12 20:20:02,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:20:33] 2025-10-12 20:20:02,639 | INFO     | collected zombie processes
[2025-10-12 16:20:33] 2025-10-12 20:20:02,639 | INFO     | will attempt to kill all subprocesses of pid=23371
[2025-10-12 16:20:33] 2025-10-12 20:20:02,736 | INFO     | process IDs to be killed: [23371] (in reverse order)
[2025-10-12 16:20:33] 2025-10-12 20:20:02,792 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:20:33] 2025-10-12 20:20:02,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:20:33] 2025-10-12 20:20:02,796 | INFO     | did not find any defunct processes belonging to 23371
[2025-10-12 16:20:33] 2025-10-12 20:20:02,800 | INFO     | did not find any defunct processes belonging to 23371
[2025-10-12 16:20:33] 2025-10-12 20:20:02,800 | INFO     | ready for new job
[2025-10-12 16:20:33] 2025-10-12 20:20:02,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:20:33] 2025-10-12 20:20:02,801 | INFO     | ***************************************
[2025-10-12 16:20:33] 2025-10-12 20:20:02,801 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:20:33] 2025-10-12 20:20:02,801 | INFO     | ***************************************
[2025-10-12 16:20:33] 2025-10-12 20:20:02,801 | INFO     | 
[2025-10-12 16:20:33] 2025-10-12 20:20:02,802 | INFO     | architecture information:
[2025-10-12 16:20:33] 2025-10-12 20:20:02,802 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:20:33] 2025-10-12 20:20:02,817 | INFO     | cat /etc/os-release:
[2025-10-12 16:20:33] NAME="CentOS Linux"
[2025-10-12 16:20:33] VERSION="7 (Core)"
[2025-10-12 16:20:33] ID="centos"
[2025-10-12 16:20:33] ID_LIKE="rhel fedora"
[2025-10-12 16:20:33] VERSION_ID="7"
[2025-10-12 16:20:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:20:33] ANSI_COLOR="0;31"
[2025-10-12 16:20:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:20:33] HOME_URL="https://www.centos.org/"
[2025-10-12 16:20:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:20:33] 
[2025-10-12 16:20:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:20:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:20:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:20:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:20:33] 
[2025-10-12 16:20:33] 2025-10-12 20:20:02,818 | INFO     | ***************************************
[2025-10-12 16:20:33] 2025-10-12 20:20:03,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:20:33] 2025-10-12 20:20:03,338 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-10-12 16:20:33] 2025-10-12 20:20:03,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:20:33] 2025-10-12 20:20:03,339 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:20:33] 2025-10-12 20:20:03,339 | INFO     | update_server=False
[2025-10-12 16:20:33] 2025-10-12 20:20:03,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:20:33] 2025-10-12 20:20:03,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:20:33] 2025-10-12 20:20:03,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:20:33] 2025-10-12 20:20:03,403 | INFO     | aborting loop
[2025-10-12 16:20:33] 2025-10-12 20:20:03,643 | INFO     | all data control threads have been joined
[2025-10-12 16:20:33] 2025-10-12 20:20:04,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:20:33] 2025-10-12 20:20:04,345 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:04,345 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:04,404 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:04,458 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:04,502 | INFO     | all job control threads have been joined
[2025-10-12 16:20:33] 2025-10-12 20:20:04,612 | INFO     | all payload control threads have been joined
[2025-10-12 16:20:33] 2025-10-12 20:20:04,648 | INFO     | [data] control thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:04,706 | INFO     | [job] validate thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:04,748 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:05,063 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:05,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:20:33] 2025-10-12 20:20:05,504 | INFO     | [job] control thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:05,587 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:05,618 | INFO     | [payload] control thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:05,736 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:05,755 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:06,169 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:09,181 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:13,428 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:20:33] 2025-10-12 20:20:14,239 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:20:33] 2025-10-12 20:20:15,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:20:33] 2025-10-12 20:20:15,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663846893376)>', '<ExcThread(monitor, started 139662580500224)>']
[2025-10-12 16:20:33] 2025-10-12 20:20:20,433 | INFO     | all workflow threads have been joined
[2025-10-12 16:20:33] 2025-10-12 20:20:20,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:20:33] 2025-10-12 20:20:20,433 | INFO     | traces error code: 0
[2025-10-12 16:20:33] 2025-10-12 20:20:20,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:20:33] 2025-10-12 20:20:33,044 | INFO     | PID=16106 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:20:33] 2025-10-12 20:20:33,044 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:20:33] 2025-10-12 20:20:33,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:20:33] 2025-10-12 20:20:33,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:20:33] 2025-10-12 20:20:33,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:20:33] 2025-10-12 20:20:33,045 | INFO     | [monitor] control thread has ended
[2025-10-12 16:20:33] 2025-10-12 20:20:33,134 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:20:33] 2025-10-12 20:20:33,137 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:20:33] 2025-10-12 20:20:33,141 [wrapper] pilotpid: 16106
[2025-10-12 16:20:33] 2025-10-12 20:20:33,145 [wrapper] Pilot exit status: 0
[2025-10-12 16:20:33] 2025-10-12 20:20:33,162 [wrapper] pandaids: 6840225442
[2025-10-12 16:20:33] 2025-10-12 20:20:33,203 [wrapper] cleanup supervisor_pilot  9153 16107
[2025-10-12 16:20:33] 2025-10-12 20:20:33,207 [wrapper] Test setup, not cleaning
[2025-10-12 16:20:33] 2025-10-12 20:20:33,210 [wrapper] apfmon messages muted
[2025-10-12 16:20:33] 2025-10-12 20:20:33,214 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:20:33] 2025-10-12 20:20:33,218 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:20:33]  *** Error codes and diagnostics ***
[2025-10-12 16:20:33]     "exeErrorCode": 0,
[2025-10-12 16:20:33]     "exeErrorDiag": "",
[2025-10-12 16:20:33]     "pilotErrorCode": 0,
[2025-10-12 16:20:33]     "pilotErrorDiag": "",
[2025-10-12 16:20:33]  *** Listing of results directory ***
[2025-10-12 16:20:33] total 409972
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 11:42 queuedata.json
[2025-10-12 16:20:33] -rwx------ 1 boincer umatlas     36292 Oct 12 11:43 runpilot2-wrapper.sh
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:20:33] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:09 run_atlas
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:09 job.xml
[2025-10-12 16:20:33] -rw-r--r-- 2 boincer umatlas 223295508 Oct 12 15:09 EVNT.46676267._004582.pool.root.1
[2025-10-12 16:20:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:09 start_atlas.sh
[2025-10-12 16:20:33] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:09 shared
[2025-10-12 16:20:33] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 15:09 input.tar.gz
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:09 boinc_lockfile
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:09 pandaJob.out
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas    975528 Oct 12 15:10 agis_schedconf.cvmfs.json
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas   1560580 Oct 12 15:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:20:33] drwx------ 5 boincer umatlas      4096 Oct 12 15:10 pilot3
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 16:12 init_data.xml
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas 190617598 Oct 12 16:19 HITS.46676269._082509.pool.root.1
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas       529 Oct 12 16:19 boinc_task_state.xml
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas      1050 Oct 12 16:19 memory_monitor_summary.json
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas    388820 Oct 12 16:19 log.46676269._082509.job.log.tgz.1
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas      7856 Oct 12 16:20 heartbeat.json
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:20 boinc_mmap_file
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas        27 Oct 12 16:20 wrapper_checkpoint.txt
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas        95 Oct 12 16:20 pilot_heartbeat.json
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas       745 Oct 12 16:20 pilotlog.txt
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas    611557 Oct 12 16:20 log.46676269._082509.job.log.1
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas       357 Oct 12 16:20 output.list
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:20 runtime_log
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas   1024000 Oct 12 16:20 result.tar.gz
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 16:20 runtime_log.err
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas       658 Oct 12 16:20 5N2NDmVPDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyTkNDmKNicpm.diag
[2025-10-12 16:20:33] -rw-r--r-- 1 boincer umatlas     22253 Oct 12 16:20 stderr.txt
[2025-10-12 16:20:33] HITS file was successfully produced:
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas 190617598 Oct 12 16:19 shared/HITS.pool.root.1
[2025-10-12 16:20:33]  *** Contents of shared directory: ***
[2025-10-12 16:20:33] total 405792
[2025-10-12 16:20:33] -rw-r--r-- 2 boincer umatlas 223295508 Oct 12 15:09 ATLAS.root_0
[2025-10-12 16:20:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:09 start_atlas.sh
[2025-10-12 16:20:33] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 15:09 input.tar.gz
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas 190617598 Oct 12 16:19 HITS.pool.root.1
[2025-10-12 16:20:33] -rw------- 1 boincer umatlas   1024000 Oct 12 16:20 result.tar.gz
16:20:34 (12314): run_atlas exited; CPU time 44840.751636
16:20:34 (12314): called boinc_finish(0)

</stderr_txt>
]]>

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