Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:45:28 (3957691): wrapper (7.7.26015): starting
06:45:28 (3957691): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 06:45:28] Arguments: --nthreads 4
[2025-10-13 06:45:28] Threads: 4
[2025-10-13 06:45:28] Checking for CVMFS
[2025-10-13 06:45:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:45:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:45:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:45:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:45:28] 2.9.2.0 2039669 5297 99308 151649 1 57 26769423 36864001 0 130560 0 4965723 99.989 305877 1170 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 06:45:28] CVMFS is ok
[2025-10-13 06:45:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:45:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:45:28] Further information can be found at the LHC@home message board.
[2025-10-13 06:45:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:45:28] Checking for apptainer binary...
[2025-10-13 06:45:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:45:28] Running /usr/bin/apptainer --version
[2025-10-13 06:45:28] apptainer version 1.4.1-1.1
[2025-10-13 06:45:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:45:28] thA315a
[2025-10-13 06:45:28] apptainer works
[2025-10-13 06:45:28] Set ATHENA_PROC_NUMBER=4
[2025-10-13 06:45:28] Set ATHENA_CORE_NUMBER=4
[2025-10-13 06:45:28] Starting ATLAS job with PandaID=6840225601
[2025-10-13 06:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:56:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:56:59] 2025-10-13 05:56:28,931 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:56:59] 2025-10-13 05:56:28,943 | INFO     | cat /etc/os-release:
[2025-10-13 07:56:59] NAME="CentOS Linux"
[2025-10-13 07:56:59] VERSION="7 (Core)"
[2025-10-13 07:56:59] ID="centos"
[2025-10-13 07:56:59] ID_LIKE="rhel fedora"
[2025-10-13 07:56:59] VERSION_ID="7"
[2025-10-13 07:56:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:56:59] ANSI_COLOR="0;31"
[2025-10-13 07:56:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:56:59] HOME_URL="https://www.centos.org/"
[2025-10-13 07:56:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:56:59] 
[2025-10-13 07:56:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:56:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:56:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:56:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:56:59] 
[2025-10-13 07:56:59] 2025-10-13 05:56:28,943 | INFO     | ***************************************
[2025-10-13 07:56:59] 2025-10-13 05:56:29,447 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 07:56:59] 2025-10-13 05:56:29,464 | INFO     | sufficient remaining disk space (232566816768 B)
[2025-10-13 07:56:59] 2025-10-13 05:56:29,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:56:59] 2025-10-13 05:56:29,464 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:56:59] 2025-10-13 05:56:29,464 | INFO     | update_server=False
[2025-10-13 07:56:59] 2025-10-13 05:56:29,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:56:59] 2025-10-13 05:56:29,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:56:59] 2025-10-13 05:56:29,745 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:56:59] 2025-10-13 05:56:29,745 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:56:59] 2025-10-13 05:56:29,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:56:59] 2025-10-13 05:56:29,746 | INFO     | will abort loop
[2025-10-13 07:56:59] 2025-10-13 05:56:29,755 | INFO     | all job control threads have been joined
[2025-10-13 07:56:59] 2025-10-13 05:56:29,964 | INFO     | all payload control threads have been joined
[2025-10-13 07:56:59] 2025-10-13 05:56:30,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:56:59] 2025-10-13 05:56:30,364 | INFO     | all data control threads have been joined
[2025-10-13 07:56:59] 2025-10-13 05:56:30,470 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:30,470 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:30,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:56:59] 2025-10-13 05:56:30,751 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:30,760 | INFO     | [job] control thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:30,848 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:30,970 | INFO     | [payload] control thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,175 | INFO     | [job] validate thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,232 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,272 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,290 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,350 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,370 | INFO     | [data] control thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,416 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:31,593 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:32,073 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:34,607 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:56:59] 2025-10-13 05:56:40,580 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:56:59] 2025-10-13 05:56:41,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841682278208)>', '<ExcThread(monitor, started 139840301557504)>']
[2025-10-13 07:56:59] 2025-10-13 05:56:46,448 | INFO     | all workflow threads have been joined
[2025-10-13 07:56:59] 2025-10-13 05:56:46,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:56:59] 2025-10-13 05:56:46,449 | INFO     | traces error code: 0
[2025-10-13 07:56:59] 2025-10-13 05:56:46,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:56:59] 2025-10-13 05:56:59,714 | INFO     | PID=3961481 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:56:59] 2025-10-13 05:56:59,714 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:56:59] 2025-10-13 05:56:59,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:56:59] 2025-10-13 05:56:59,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:56:59] 2025-10-13 05:56:59,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:56:59] 2025-10-13 05:56:59,714 | INFO     | [monitor] control thread has ended
[2025-10-13 07:56:59] 2025-10-13 05:56:59,778 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:56:59] 2025-10-13 05:56:59,782 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:56:59] 2025-10-13 05:56:59,786 [wrapper] pilotpid: 3961481
[2025-10-13 07:56:59] 2025-10-13 05:56:59,790 [wrapper] Pilot exit status: 0
[2025-10-13 07:56:59] 2025-10-13 05:56:59,801 [wrapper] pandaids: 6840225601
[2025-10-13 07:56:59] 2025-10-13 05:56:59,822 [wrapper] cleanup supervisor_pilot 3977955 3961482
[2025-10-13 07:56:59] 2025-10-13 05:56:59,825 [wrapper] Test setup, not cleaning
[2025-10-13 07:56:59] 2025-10-13 05:56:59,829 [wrapper] apfmon messages muted
[2025-10-13 07:56:59] 2025-10-13 05:56:59,832 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:56:59] 2025-10-13 05:56:59,835 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:56:59]  *** Error codes and diagnostics ***
[2025-10-13 07:56:59]     "exeErrorCode": 0,
[2025-10-13 07:56:59]     "exeErrorDiag": "",
[2025-10-13 07:56:59]     "pilotErrorCode": 0,
[2025-10-13 07:56:59]     "pilotErrorDiag": "",
[2025-10-13 07:56:59]  *** Listing of results directory ***
[2025-10-13 07:56:59] total 416064
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 07:56:59] -rwx------ 1 boinc boinc     36292 Oct 12 17:50 runpilot2-wrapper.sh
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:50 queuedata.json
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:56:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:45 run_atlas
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:45 job.xml
[2025-10-13 07:56:59] -rw-r--r-- 2 boinc boinc 223275661 Oct 13 06:45 EVNT.46676267._004589.pool.root.1
[2025-10-13 07:56:59] -rw-r--r-- 2 boinc boinc    569678 Oct 13 06:45 input.tar.gz
[2025-10-13 07:56:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:45 start_atlas.sh
[2025-10-13 07:56:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:45 shared
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:45 boinc_setup_complete
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc      6371 Oct 13 06:45 init_data.xml
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:45 boinc_lockfile
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc      2549 Oct 13 06:45 pandaJob.out
[2025-10-13 07:56:59] -rw------- 1 boinc boinc    974365 Oct 13 06:45 agis_schedconf.cvmfs.json
[2025-10-13 07:56:59] -rw------- 1 boinc boinc   1560580 Oct 13 06:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:56:59] drwx------ 5 boinc boinc      4096 Oct 13 06:45 pilot3
[2025-10-13 07:56:59] -rw------- 1 boinc boinc 197125945 Oct 13 07:56 HITS.46676269._082668.pool.root.1
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 07:56 boinc_task_state.xml
[2025-10-13 07:56:59] -rw------- 1 boinc boinc      1022 Oct 13 07:56 memory_monitor_summary.json
[2025-10-13 07:56:59] -rw------- 1 boinc boinc    248446 Oct 13 07:56 log.46676269._082668.job.log.tgz.1
[2025-10-13 07:56:59] -rw------- 1 boinc boinc      7768 Oct 13 07:56 heartbeat.json
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:56 wrapper_checkpoint.txt
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:56 boinc_mmap_file
[2025-10-13 07:56:59] -rw------- 1 boinc boinc       747 Oct 13 07:56 pilotlog.txt
[2025-10-13 07:56:59] -rw------- 1 boinc boinc        95 Oct 13 07:56 pilot_heartbeat.json
[2025-10-13 07:56:59] -rw------- 1 boinc boinc    631993 Oct 13 07:56 log.46676269._082668.job.log.1
[2025-10-13 07:56:59] -rw------- 1 boinc boinc       357 Oct 13 07:56 output.list
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:56 runtime_log
[2025-10-13 07:56:59] -rw------- 1 boinc boinc    901120 Oct 13 07:56 result.tar.gz
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc      8782 Oct 13 07:56 runtime_log.err
[2025-10-13 07:56:59] -rw------- 1 boinc boinc       659 Oct 13 07:56 ABJODmVWDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpLUMDmRuvY4m.diag
[2025-10-13 07:56:59] -rw-r--r-- 1 boinc boinc      9116 Oct 13 07:56 stderr.txt
[2025-10-13 07:56:59] HITS file was successfully produced:
[2025-10-13 07:56:59] -rw------- 1 boinc boinc 197125945 Oct 13 07:56 shared/HITS.pool.root.1
[2025-10-13 07:56:59]  *** Contents of shared directory: ***
[2025-10-13 07:56:59] total 412016
[2025-10-13 07:56:59] -rw-r--r-- 2 boinc boinc 223275661 Oct 13 06:45 ATLAS.root_0
[2025-10-13 07:56:59] -rw-r--r-- 2 boinc boinc    569678 Oct 13 06:45 input.tar.gz
[2025-10-13 07:56:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:45 start_atlas.sh
[2025-10-13 07:56:59] -rw------- 1 boinc boinc 197125945 Oct 13 07:56 HITS.pool.root.1
[2025-10-13 07:56:59] -rw------- 1 boinc boinc    901120 Oct 13 07:56 result.tar.gz
07:57:00 (3957691): run_atlas exited; CPU time 16067.848973
07:57:00 (3957691): called boinc_finish(0)

</stderr_txt>
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